Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, cytosol
Predictor Summary:
Predictor Summary:
- extracellular 3
- endoplasmic reticulum 4
- vacuole 3
- plasma membrane 3
- golgi 3
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d039981_P001 | Maize | cytosol | 29.29 | 70.73 |
| Zm00001d045670_P001 | Maize | cytosol | 42.09 | 66.49 |
| Zm00001d031251_P001 | Maize | cytosol, mitochondrion | 21.89 | 50.39 |
| Zm00001d014589_P001 | Maize | cytosol | 15.82 | 48.45 |
| Zm00001d045718_P001 | Maize | cytosol | 37.37 | 43.87 |
| Zm00001d037983_P001 | Maize | cytosol | 31.99 | 40.25 |
| Zm00001d008240_P001 | Maize | cytosol, extracellular, mitochondrion, nucleus | 26.6 | 39.9 |
| CDY11954 | Canola | cytosol | 25.25 | 38.46 |
| Zm00001d010393_P001 | Maize | plastid | 41.41 | 33.79 |
| Zm00001d019582_P001 | Maize | cytosol | 35.02 | 32.5 |
| GSMUA_Achr4P09770_001 | Banana | cytosol | 46.46 | 30.26 |
| Zm00001d043774_P001 | Maize | cytosol | 8.42 | 29.41 |
| Zm00001d047488_P001 | Maize | nucleus | 15.82 | 29.38 |
| OQU80990 | Sorghum | cytosol | 59.26 | 29.0 |
| Os08t0497300-01 | Rice | cytosol, plastid | 57.24 | 28.15 |
| TraesCS7D01G238000.2 | Wheat | cytosol | 56.9 | 27.93 |
| Zm00001d005995_P003 | Maize | nucleus | 55.89 | 27.71 |
| Zm00001d031316_P020 | Maize | cytosol | 58.59 | 26.98 |
| KRH45371 | Soybean | cytosol | 39.06 | 26.36 |
| CDY11957 | Canola | cytosol | 39.39 | 26.29 |
| HORVU7Hr1G048880.11 | Barley | mitochondrion | 57.24 | 26.28 |
| TraesCS7B01G135600.2 | Wheat | plastid | 56.9 | 25.34 |
| TraesCS7A01G240000.3 | Wheat | endoplasmic reticulum, plastid | 56.9 | 25.19 |
| Zm00001d017876_P018 | Maize | cytosol | 51.85 | 24.96 |
| GSMUA_Achr5P04200_001 | Banana | plastid | 51.18 | 24.32 |
| Zm00001d051674_P037 | Maize | cytosol | 49.83 | 24.18 |
| GSMUA_Achr3P04130_001 | Banana | nucleus | 50.51 | 24.08 |
| Zm00001d038880_P001 | Maize | cytosol | 49.49 | 23.79 |
| Zm00001d043733_P002 | Maize | mitochondrion | 43.43 | 23.5 |
| Zm00001d052840_P016 | Maize | plastid | 57.24 | 23.45 |
| Zm00001d009439_P004 | Maize | cytosol | 48.48 | 23.3 |
| Zm00001d011663_P003 | Maize | cytosol | 47.14 | 22.8 |
| Zm00001d015174_P005 | Maize | cytosol | 50.17 | 22.78 |
| GSMUA_Achr8P24430_001 | Banana | endoplasmic reticulum | 50.51 | 22.73 |
| VIT_19s0015g01160.t01 | Wine grape | cytosol | 47.14 | 22.54 |
| Zm00001d050131_P002 | Maize | cytosol | 48.48 | 22.54 |
| KRH62508 | Soybean | cytosol | 46.8 | 22.42 |
| KRH56402 | Soybean | cytosol | 46.8 | 22.42 |
| Zm00001d053994_P008 | Maize | cytosol, mitochondrion | 50.17 | 22.37 |
| AT1G55690.4 | Thale cress | nucleus | 45.79 | 21.76 |
| PGSC0003DMT400057292 | Potato | nucleus | 45.12 | 21.68 |
| Solyc07g066090.2.1 | Tomato | nucleus | 45.12 | 21.61 |
| KRH07662 | Soybean | cytosol | 44.78 | 21.49 |
| Zm00001d016601_P006 | Maize | cytosol | 43.43 | 21.32 |
| CDY51966 | Canola | cytosol | 42.09 | 21.01 |
| CDY10540 | Canola | cytosol, nucleus, plastid | 45.45 | 21.0 |
| AT5G56160.1 | Thale cress | cytosol | 40.74 | 20.97 |
| CDY36780 | Canola | plastid | 40.07 | 20.88 |
| CDY42378 | Canola | nucleus | 45.12 | 20.84 |
| CDY17397 | Canola | cytosol | 41.41 | 20.67 |
| Zm00001d015175_P002 | Maize | plastid | 44.78 | 20.62 |
| CDY50018 | Canola | vacuole | 43.43 | 20.19 |
| Solyc10g005740.1.1 | Tomato | nucleus | 41.75 | 20.06 |
| Zm00001d012531_P001 | Maize | mitochondrion | 8.75 | 19.85 |
| Bra002841.1-P | Field mustard | cytosol | 34.34 | 19.5 |
| CDY51073 | Canola | mitochondrion, nucleus | 31.65 | 18.4 |
| Bra030841.1-P | Field mustard | nucleus | 37.04 | 18.36 |
| PGSC0003DMT400022405 | Potato | cytosol, nucleus | 31.99 | 16.32 |
| Zm00001d015785_P001 | Maize | extracellular | 16.5 | 14.98 |
| Zm00001d053648_P005 | Maize | cytosol, endoplasmic reticulum, plastid | 15.82 | 13.62 |
| Zm00001d035370_P003 | Maize | plastid | 18.18 | 13.24 |
| Bra028944.1-P | Field mustard | plastid | 29.29 | 12.5 |
| Zm00001d005118_P002 | Maize | cytosol | 16.5 | 12.44 |
| Zm00001d046538_P003 | Maize | cytosol | 16.16 | 12.21 |
| Bra038012.1-P | Field mustard | cytosol | 43.43 | 12.19 |
| Zm00001d019834_P003 | Maize | cytosol, extracellular, plastid | 3.7 | 10.78 |
| Zm00001d005778_P001 | Maize | plastid | 10.1 | 10.68 |
| Zm00001d024390_P001 | Maize | cytosol | 4.38 | 10.16 |
| Zm00001d053333_P001 | Maize | cytosol | 4.04 | 9.84 |
| Zm00001d015625_P001 | Maize | cytosol | 4.04 | 9.23 |
| Zm00001d050144_P001 | Maize | cytosol | 4.71 | 8.09 |
| Zm00001d020031_P001 | Maize | cytosol | 3.7 | 7.01 |
| Zm00001d023995_P002 | Maize | extracellular, golgi, plastid | 4.04 | 5.08 |
| Zm00001d051318_P001 | Maize | cytosol | 2.69 | 4.21 |
| CDY36781 | Canola | extracellular | 0.0 | 0.0 |
| Bra002840.1-P | Field mustard | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:Zm00001d035770_P002 | EnsemblPlants:Zm00001d035770_T002 | EnsemblPlantsGene:Zm00001d035770 | Gene3D:3.40.525.10 | InterPro:AB_hydrolase | InterPro:CRAL-TRIO_dom |
| InterPro:CRAL-TRIO_dom_sf | InterPro:Hydrolase_4 | InterPro:IPR001251 | InterPro:IPR029058 | InterPro:IPR036865 | PANTHER:PTHR23324 |
| PANTHER:PTHR23324:SF65 | PFAM:PF00650 | PFAM:PF12146 | PFscan:PS50191 | ProteinID:AQK79663.1 | SMART:SM00516 |
| SUPFAM:SSF52087 | SUPFAM:SSF53474 | UniParc:UPI0002208075 | UniProt:A0A1D6LIQ4 | MapMan:35.1 | : |
Description
Phosphatidylinositol/phosphatidylcholine transfer protein SFH13
Coordinates
chr6:+:46875095..46882203
Molecular Weight (calculated)
33877.9 Da
IEP (calculated)
6.648
GRAVY (calculated)
-0.064
Length
297 amino acids
Sequence
(BLAST)
(BLAST)
001: MVSFGALVSI EKLKLECSFV ICWSYYYLLP YLTYQDFVFE ELDDVLRYYP QGYHGVDREG RPVYIERLGK VDPNKLMQIT SVDRYIKYHV QEFERAFRER
101: FPACTLAAKR HIDSTTTILD GFKNFSKTAR KLVHRMQKID SDYYPEVLGS NYQSRLLEVI DSSELPEFLG GSCTCSDEGG CPGSNKGPWN DPYILKDTEP
201: SAAYPSEKGE NMLKKRFLYG FSMGGTVVVQ LHMNDPFYWD GAVLLAPMCR VLSLTVLNGL SFLPIFPPVS VDRCLAISFY AIALSALIKI YGCFCLK
101: FPACTLAAKR HIDSTTTILD GFKNFSKTAR KLVHRMQKID SDYYPEVLGS NYQSRLLEVI DSSELPEFLG GSCTCSDEGG CPGSNKGPWN DPYILKDTEP
201: SAAYPSEKGE NMLKKRFLYG FSMGGTVVVQ LHMNDPFYWD GAVLLAPMCR VLSLTVLNGL SFLPIFPPVS VDRCLAISFY AIALSALIKI YGCFCLK
001: MTDTMSAHMD RHNKLDYDGS EDEKKTKLCS LKKKAINASN KFKHSFTKRT RRNSRVMSVS IVDDIDLEEL QAVDAFRQAL ILDELLPSKH DDHHMMLRFL
101: RARKFDLEKA KQMWTDMIHW RKEFGVDTIM EDFDFKEIDE VLKYYPQGYH GVDKDGRPVY IERLGQVDAT KLMQVTTIDR YVKYHVREFE KTFNIKLPAC
201: SIAAKKHIDQ STTILDVQGV GLKSFSKAAR DLLQRIQKID SDNYPETLNR MFIINAGSGF RLLWSTVKSF LDPKTTAKIH VLGNKYQSKL LEIIDSNELP
301: EFLGGNCTCA DKGGCMRSDK GPWNDPDIFK MVQNGEGKCP RKTLSNIEEK TISVDENTTM KNKFDAENTK FIPMIDKTVN ASTWPTNLHK SNYPEPEDLY
401: SAVKPSQRRG GEGYLFGGVM SLVMGLMTVV RLTKNMPRKL TEAAIYGGEV DKAETTMVSN QEYMSMVKRM AELEEKCRSL DNQPAAFSPE KEQILTAALS
501: RVDELELQLA QTKKTLEETM ATQHVIMAYI DKKKKKKKFF GF
101: RARKFDLEKA KQMWTDMIHW RKEFGVDTIM EDFDFKEIDE VLKYYPQGYH GVDKDGRPVY IERLGQVDAT KLMQVTTIDR YVKYHVREFE KTFNIKLPAC
201: SIAAKKHIDQ STTILDVQGV GLKSFSKAAR DLLQRIQKID SDNYPETLNR MFIINAGSGF RLLWSTVKSF LDPKTTAKIH VLGNKYQSKL LEIIDSNELP
301: EFLGGNCTCA DKGGCMRSDK GPWNDPDIFK MVQNGEGKCP RKTLSNIEEK TISVDENTTM KNKFDAENTK FIPMIDKTVN ASTWPTNLHK SNYPEPEDLY
401: SAVKPSQRRG GEGYLFGGVM SLVMGLMTVV RLTKNMPRKL TEAAIYGGEV DKAETTMVSN QEYMSMVKRM AELEEKCRSL DNQPAAFSPE KEQILTAALS
501: RVDELELQLA QTKKTLEETM ATQHVIMAYI DKKKKKKKFF GF
Arabidopsis Description
SFH3Phosphatidylinositol/phosphatidylcholine transfer protein SFH3 [Source:UniProtKB/Swiss-Prot;Acc:Q93ZE9]
SUBAcon: [vacuole,nucleus,cytosol]
SUBAcon: [vacuole,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.