Subcellular Localization
min:
: max
Winner_takes_all: golgi, plastid, extracellular
Predictor Summary:
Predictor Summary:
- plastid 3
- golgi 3
- extracellular 3
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d053333_P001 | Maize | cytosol | 49.58 | 95.9 |
| Zm00001d024390_P001 | Maize | cytosol | 50.0 | 92.19 |
| Zm00001d015625_P001 | Maize | cytosol | 48.31 | 87.69 |
| Zm00001d019834_P003 | Maize | cytosol, extracellular, plastid | 37.71 | 87.25 |
| Zm00001d020031_P001 | Maize | cytosol | 38.14 | 57.32 |
| Zm00001d050144_P001 | Maize | cytosol | 38.56 | 52.6 |
| Zm00001d051318_P001 | Maize | cytosol | 38.98 | 48.42 |
| Zm00001d015785_P001 | Maize | extracellular | 38.14 | 27.52 |
| Zm00001d043774_P001 | Maize | cytosol | 7.63 | 21.18 |
| Zm00001d046538_P003 | Maize | cytosol | 33.47 | 20.1 |
| Zm00001d053648_P005 | Maize | cytosol, endoplasmic reticulum, plastid | 25.42 | 17.39 |
| Zm00001d039981_P001 | Maize | cytosol | 8.9 | 17.07 |
| Zm00001d031251_P001 | Maize | cytosol, mitochondrion | 8.9 | 16.28 |
| Zm00001d012531_P001 | Maize | mitochondrion | 7.63 | 13.74 |
| Zm00001d005118_P002 | Maize | cytosol | 21.61 | 12.94 |
| Zm00001d008240_P001 | Maize | cytosol, extracellular, mitochondrion, nucleus | 7.2 | 8.59 |
| Zm00001d014589_P001 | Maize | cytosol | 2.97 | 7.22 |
| Zm00001d019582_P001 | Maize | cytosol | 9.32 | 6.88 |
| Zm00001d038880_P001 | Maize | cytosol | 16.1 | 6.15 |
| Zm00001d009439_P004 | Maize | cytosol | 16.1 | 6.15 |
| Zm00001d043733_P002 | Maize | mitochondrion | 13.56 | 5.83 |
| Zm00001d015174_P005 | Maize | cytosol | 16.1 | 5.81 |
| Zm00001d053994_P008 | Maize | cytosol, mitochondrion | 16.1 | 5.71 |
| Zm00001d017876_P018 | Maize | cytosol | 14.83 | 5.67 |
| Zm00001d051674_P037 | Maize | cytosol | 14.41 | 5.56 |
| Zm00001d011663_P003 | Maize | cytosol | 14.41 | 5.54 |
| Zm00001d016601_P006 | Maize | cytosol | 13.98 | 5.45 |
| Zm00001d005995_P003 | Maize | nucleus | 13.56 | 5.34 |
| Zm00001d050131_P002 | Maize | cytosol | 13.98 | 5.16 |
| Zm00001d031316_P020 | Maize | cytosol | 13.98 | 5.12 |
| Zm00001d052840_P016 | Maize | plastid | 13.14 | 4.28 |
| Zm00001d035770_P002 | Maize | cytosol, endoplasmic reticulum | 5.08 | 4.04 |
| Zm00001d015175_P002 | Maize | plastid | 10.17 | 3.72 |
| Zm00001d045670_P001 | Maize | cytosol | 2.12 | 2.66 |
| Zm00001d010393_P001 | Maize | plastid | 3.39 | 2.2 |
| Zm00001d005778_P001 | Maize | plastid | 2.54 | 2.14 |
| Zm00001d035370_P003 | Maize | plastid | 3.39 | 1.96 |
| Zm00001d045718_P001 | Maize | cytosol | 1.27 | 1.19 |
| Zm00001d037983_P001 | Maize | cytosol | 0.85 | 0.85 |
| Zm00001d047488_P001 | Maize | nucleus | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:Zm00001d023995_P002 | EnsemblPlants:Zm00001d023995_T002 | EnsemblPlantsGene:Zm00001d023995 | Gene3D:3.40.525.10 | InterPro:CRAL-TRIO_dom_sf | InterPro:CRAL/TRIO_N_dom |
| InterPro:CRAL/TRIO_N_dom_sf | InterPro:IPR036865 | PANTHER:PTHR23324 | PANTHER:PTHR23324:SF90 | PFAM:PF03765 | ProteinID:AQK40509.1 |
| SignalP:SignalP-noTM | SMART:SM01100 | SUPFAM:SSF46938 | UniParc:UPI0008445768 | UniProt:A0A1D6IX63 | MapMan:35.2 |
Description
Sec14p-like phosphatidylinositol transfer family protein
Coordinates
chr10:-:35301876..35306863
Molecular Weight (calculated)
26148.9 Da
IEP (calculated)
9.568
GRAVY (calculated)
0.116
Length
236 amino acids
Sequence
(BLAST)
(BLAST)
001: MFISCALLFF LPGARSLLSG LHAHRVQLPP PAVSAARPSL ELRSASNSGA RPSSLLPLFI TLYGWSLENM HQGYPKETLV RFLKAREWNV AKAHKMIVEC
101: LNWRIQNEID SVLERPIAPV DLYKSIRDSQ LIGLSRYTKE ILLYNFDGGT ICSVVILKEW LGIHRVAAAE ISKGLPIFGI GVGHSTYDKA SVITLMLAIC
201: LVGYSYSQNH KSAWFEAIST KPNKGFRLSS SDSPSC
101: LNWRIQNEID SVLERPIAPV DLYKSIRDSQ LIGLSRYTKE ILLYNFDGGT ICSVVILKEW LGIHRVAAAE ISKGLPIFGI GVGHSTYDKA SVITLMLAIC
201: LVGYSYSQNH KSAWFEAIST KPNKGFRLSS SDSPSC
001: MSITNEEAVK QLRALMEDVD DSLRESYRNI HQGYPTENLL RFLKARDGNV QKAHKMLLEC LEWRTQNEID KILTKPIVPV DLYRGIRDTQ LVGVSGYSKE
101: GLPVIAIGVG LSTYDKASVH YYVQSHIQMN EYRDRVVLPS ASKKQGRPIC TCLKILDMSG LKLSALSQIK LMTAITTIDD LNYPEKTETY YVVNVPYIFS
201: ACWKTIKPLL QERTKKKIQV LKGCGKDELL KIMDYESLPH FCRREGSGSG RHISNGTVDN CFSLDHSFHQ DLYDYVKQQA LVKGSGAPIR HGSVHVKFPE
301: PDTEGNKIFD TLENEFQKLG NDQKI
101: GLPVIAIGVG LSTYDKASVH YYVQSHIQMN EYRDRVVLPS ASKKQGRPIC TCLKILDMSG LKLSALSQIK LMTAITTIDD LNYPEKTETY YVVNVPYIFS
201: ACWKTIKPLL QERTKKKIQV LKGCGKDELL KIMDYESLPH FCRREGSGSG RHISNGTVDN CFSLDHSFHQ DLYDYVKQQA LVKGSGAPIR HGSVHVKFPE
301: PDTEGNKIFD TLENEFQKLG NDQKI
Arabidopsis Description
At1g55840/F14J16_2 [Source:UniProtKB/TrEMBL;Acc:Q8W580]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.