Factsheet for Zm00001d017876_P018

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d012531_P001	Maize	mitochondrion	20.26	95.42
KXG30865	Sorghum	cytosol	94.81	94.81
Zm00001d031251_P001	Maize	cytosol, mitochondrion	19.12	91.47
Zm00001d051674_P037	Maize	cytosol	90.6	91.34
Os02t0721800-01	Rice	cytosol	82.01	82.68
TraesCS6A01G284800.1	Wheat	cytosol	82.01	81.61
TraesCS6D01G265200.1	Wheat	cytosol	81.85	81.58
TraesCS6B01G313500.1	Wheat	cytosol	81.52	81.26
HORVU6Hr1G071770.19	Barley	cytosol	81.36	81.23
Zm00001d039981_P001	Maize	cytosol	15.23	76.42
GSMUA_Achr4P09770_001	Banana	cytosol	45.54	61.62
GSMUA_Achr3P04130_001	Banana	nucleus	59.97	59.39
GSMUA_Achr5P04200_001	Banana	plastid	56.89	56.16
Zm00001d043774_P001	Maize	cytosol	7.62	55.29
Zm00001d014589_P001	Maize	cytosol	8.59	54.64
GSMUA_Achr8P24430_001	Banana	endoplasmic reticulum	57.7	53.94
Zm00001d005995_P003	Maize	nucleus	51.86	53.42
Zm00001d045670_P001	Maize	cytosol	16.21	53.19
Zm00001d035770_P002	Maize	cytosol, endoplasmic reticulum	24.96	51.85
Zm00001d045718_P001	Maize	cytosol	21.23	51.78
Zm00001d008240_P001	Maize	cytosol, extracellular, mitochondrion, nucleus	16.53	51.52
Zm00001d031316_P020	Maize	cytosol	52.84	50.54
KRH62508	Soybean	cytosol	49.43	49.19
KRH45371	Soybean	cytosol	35.01	49.09
VIT_19s0015g01160.t01	Wine grape	cytosol	49.27	48.95
KRH56402	Soybean	cytosol	48.46	48.23
Solyc07g066090.2.1	Tomato	nucleus	47.81	47.58
CDY11954	Canola	cytosol	14.91	47.18
PGSC0003DMT400057292	Potato	nucleus	47.0	46.93
KRH07662	Soybean	cytosol	47.0	46.85
AT1G55690.4	Thale cress	nucleus	47.33	46.72
CDY10540	Canola	cytosol, nucleus, plastid	48.3	46.35
CDY42378	Canola	nucleus	48.3	46.35
Solyc10g005740.1.1	Tomato	nucleus	45.54	45.47
CDY11957	Canola	cytosol	32.74	45.39
Bra030841.1-P	Field mustard	nucleus	43.76	45.08
Zm00001d052840_P016	Maize	plastid	52.84	44.97
Zm00001d050131_P002	Maize	cytosol	46.52	44.91
Zm00001d015174_P005	Maize	cytosol	46.84	44.19
CDY50018	Canola	vacuole	45.38	43.82
Zm00001d053994_P008	Maize	cytosol, mitochondrion	46.84	43.39
PGSC0003DMT400022405	Potato	cytosol, nucleus	40.52	42.96
Zm00001d019582_P001	Maize	cytosol	22.2	42.81
Zm00001d010393_P001	Maize	plastid	24.96	42.31
CDY51073	Canola	mitochondrion, nucleus	35.01	42.27
Zm00001d009439_P004	Maize	cytosol	41.98	41.91
Zm00001d038880_P001	Maize	cytosol	41.98	41.91
AT5G56160.1	Thale cress	cytosol	38.74	41.42
Bra002841.1-P	Field mustard	cytosol	34.85	41.11
CDY51966	Canola	cytosol	39.38	40.84
Zm00001d011663_P003	Maize	cytosol	40.52	40.72
CDY17397	Canola	cytosol	39.06	40.5
Zm00001d016601_P006	Maize	cytosol	39.55	40.33
Zm00001d043733_P002	Maize	mitochondrion	35.49	39.89
Zm00001d037983_P001	Maize	cytosol	15.07	39.41
CDY36780	Canola	plastid	34.68	37.54
Zm00001d047488_P001	Maize	nucleus	9.24	35.62
Zm00001d015175_P002	Maize	plastid	37.12	35.5
Bra038012.1-P	Field mustard	cytosol	45.22	26.37
Zm00001d015785_P001	Maize	extracellular	13.94	26.3
Bra028944.1-P	Field mustard	plastid	29.34	26.01
Zm00001d053333_P001	Maize	cytosol	4.86	24.59
Zm00001d015625_P001	Maize	cytosol	5.02	23.85
Zm00001d024390_P001	Maize	cytosol	4.86	23.44
Zm00001d035370_P003	Maize	plastid	15.23	23.04
Zm00001d046538_P003	Maize	cytosol	14.26	22.39
Zm00001d005118_P002	Maize	cytosol	13.78	21.57
Zm00001d019834_P003	Maize	cytosol, extracellular, plastid	3.4	20.59
Zm00001d053648_P005	Maize	cytosol, endoplasmic reticulum, plastid	11.35	20.29
Zm00001d005778_P001	Maize	plastid	9.24	20.28
Zm00001d050144_P001	Maize	cytosol	5.19	18.5
Zm00001d051318_P001	Maize	cytosol	5.19	16.84
Zm00001d023995_P002	Maize	extracellular, golgi, plastid	5.67	14.83
Zm00001d020031_P001	Maize	cytosol	3.08	12.1
Bra002840.1-P	Field mustard	cytosol	0.32	2.6
CDY36781	Canola	extracellular	0.32	1.19

Protein Annotations

Gene3D:1.10.8.20	EntrezGene:100381849	Gene3D:3.40.525.10	MapMan:35.1	UniProt:A0A1D6HIQ7	ProteinID:AQK74391.1
InterPro:CRAL-TRIO_dom	InterPro:CRAL-TRIO_dom_sf	InterPro:CRAL/TRIO_N_dom	InterPro:CRAL/TRIO_N_dom_sf	InterPro:IPR001251	InterPro:IPR036865
PFAM:PF00650	PFAM:PF03765	PRINTS:PR00180	PFscan:PS50191	PANTHER:PTHR23324	PANTHER:PTHR23324:SF73
SMART:SM00516	SMART:SM01100	SUPFAM:SSF46938	SUPFAM:SSF52087	UniParc:UPI000221CF08	EnsemblPlantsGene:Zm00001d017876
EnsemblPlants:Zm00001d017876_P018	EnsemblPlants:Zm00001d017876_T018	:	:	:	:

Description

Phosphatidylinositol/phosphatidylcholine transfer protein SFH13

Coordinates

chr5:-:209361981..209367855

Molecular Weight (calculated)

70158.5 Da

IEP (calculated)

7.865

GRAVY (calculated)

-0.589

Length

617 amino acids

Sequence
(BLAST)

001: MSEGNVDSIQ ISVSNDERRN RADAEISEDE PRHTRMRSLK KKALHASTRL THSLKKRGKR KVDCRVPRIA IEDVRDAEEE QAVNSFREVL FARGLLPVKH
101: DNYHTMLRFL KARKFDFEKA AQMWADMLQW RKEFGTDTIF EDFEFHELEE VLQYYPHGYH GVDKEGRPVY IELLGKVEPN KLIQITTVER YIKYHVQEFE
201: RAFREKFPAC SISAKRHIDT TTTILDVHGV GWKNFSKIAR DLVRCMQKID GDYYPETLHQ MFIVNAGPGF KLIWSTVKGL LDPKTSSKIH VLGTKYQSRL
301: LEAIDASQLP EYFGGSCTCS NHGGCLRSNK GPWSDPSIMK LVHSMESLKE IGQVSDIEET VTGSMRLRAL KLPERISDTS NAESGSDVDD LGSPVAPEDV
401: EYPSLAPVRE EARESGSTTY SGSIGMSRMA DKVVGSNGRY NSTGNETRQV NAEQGSLING GLLAPAGQRA PNDAVGNDDG FLKYISRRVV AIFLEVLSFL
501: RFFIRRRQHS ENVHSHTATA PSSLANLQTI KEDRVNPCLE RLDRLESMFN QLSKKPPELP EDKDRAIQDS FDRIKSIEFD LQKTKKVLHA TVIKQMQMAE
601: TLEAVTEPDL RRRKFCT

Best Arabidopsis Sequence Match ( AT2G21520.1 )
(BLAST)

001: MSGPLDRFAR PCFEGFLSSD EKKERKSDFE NSEDERRTRI GSLKKKAINA STKFKHSLKK KSGRRKSDGR VSSVSIEDVR DVEELQAVDA FRQSLLMDEL
101: LPDRHDDYHM MLRFLKARKF DVEKAKQMWA DMIQWRKEFG TDTIIQDFDF EEINEVLKHY PQCYHGVDKE GRPIYIERLG KVDPNRLMQV TSMDRYVRYH
201: VKEFERSFMI KFPSCTISAK RHIDSSTTIL DVQGVGLKNF NKSARDLITR LQKIDGDNYP ETLHQMFIIN AGPGFRLLWN TVKSFLDPKT SAKIHVLGYK
301: YLSKLLEVID VNELPEFLGG ACTCADQGGC MLSDKGPWKN PEIVKMVLHG GAHRARQVVK VLNSEGKVIA YAKPSYTWIK GSDTSTAESG SDAEDIGSPK
401: AIKSFSHLRL TPVREEAKIA GETSLAGSFP GYDEYVPMVD KAVDATWKVK PAIQRVASRG ALMSPTVPKD HEGIKARVLV MFMAFLMAVF TFFRTVTKKL
501: PATTTSSPAE TQGNAIELGS NGEGVKEECR PPSPVPDLTE TDLLNCVTKK LTELEGKIGT LQSKPNEMPY EKEELLNAAV CRVDALEAEL IATKKALYEA
601: LMRQEELLAY IDRQEEAQFQ KMKKKKKKHL FCF

Arabidopsis Description

Sec14p-like phosphatidylinositol transfer family protein [Source:UniProtKB/TrEMBL;Acc:B3H588]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.