Factsheet for TraesCS6B01G313500.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G265200.1	Wheat	cytosol	98.87	98.87
TraesCS6A01G284800.1	Wheat	cytosol	98.71	98.55
HORVU6Hr1G071770.19	Barley	cytosol	97.25	97.41
Zm00001d012531_P001	Maize	mitochondrion	18.09	85.5
Os02t0721800-01	Rice	cytosol	83.04	83.99
Zm00001d031251_P001	Maize	cytosol, mitochondrion	17.45	83.72
KXG30865	Sorghum	cytosol	82.55	82.82
Zm00001d017876_P018	Maize	cytosol	81.26	81.52
Zm00001d051674_P037	Maize	cytosol	79.97	80.88
GSMUA_Achr3P04130_001	Banana	nucleus	60.74	60.35
GSMUA_Achr4P09770_001	Banana	cytosol	44.26	60.09
GSMUA_Achr5P04200_001	Banana	plastid	57.51	56.96
TraesCS2B01G533900.1	Wheat	nucleus	54.93	53.97
GSMUA_Achr8P24430_001	Banana	endoplasmic reticulum	57.03	53.48
TraesCS7B01G135600.2	Wheat	plastid	55.09	51.12
KRH45371	Soybean	cytosol	35.54	50.0
VIT_19s0015g01160.t01	Wine grape	cytosol	49.27	49.11
KRH62508	Soybean	cytosol	48.95	48.87
KRH56402	Soybean	cytosol	48.3	48.23
Solyc07g066090.2.1	Tomato	nucleus	47.98	47.9
PGSC0003DMT400057292	Potato	nucleus	47.33	47.41
AT1G55690.4	Thale cress	nucleus	47.17	46.72
CDY10540	Canola	cytosol, nucleus, plastid	48.3	46.5
CDY11957	Canola	cytosol	33.28	46.29
KRH07662	Soybean	cytosol	46.2	46.2
CDY42378	Canola	nucleus	47.82	46.03
Solyc10g005740.1.1	Tomato	nucleus	45.88	45.95
TraesCS6B01G125600.1	Wheat	cytosol, nucleus, plastid	46.69	45.87
CDY11954	Canola	cytosol	14.22	45.13
Bra030841.1-P	Field mustard	nucleus	43.3	44.74
CDY50018	Canola	vacuole	45.72	44.29
PGSC0003DMT400022405	Potato	cytosol, nucleus	41.2	43.81
TraesCS1B01G384500.1	Wheat	cytosol, nucleus, plastid	43.3	43.16
AT5G56160.1	Thale cress	cytosol	40.06	42.98
CDY51073	Canola	mitochondrion, nucleus	35.22	42.66
Bra002841.1-P	Field mustard	cytosol	35.86	42.45
CDY51966	Canola	cytosol	40.39	42.02
TraesCS2B01G354800.2	Wheat	nucleus	40.06	41.96
CDY17397	Canola	cytosol	40.23	41.85
TraesCS3B01G287000.6	Wheat	cytosol	40.39	39.19
TraesCS2B01G527900.2	Wheat	mitochondrion	24.39	38.32
TraesCS6B01G125700.1	Wheat	plastid	37.96	38.21
CDY36780	Canola	plastid	35.06	38.07
Bra038012.1-P	Field mustard	cytosol	45.56	26.65
Bra028944.1-P	Field mustard	plastid	29.89	26.58
TraesCS5B01G166800.1	Wheat	cytosol	13.73	25.37
TraesCS6B01G188100.1	Wheat	cytosol	13.25	25.08
TraesCS7B01G280200.2	Wheat	cytosol	12.28	23.38
Bra002840.1-P	Field mustard	cytosol	0.32	2.6
CDY36781	Canola	extracellular	0.32	1.19

Protein Annotations

EnsemblPlants:TraesCS6B01G313500.1	EnsemblPlantsGene:TraesCS6B01G313500	Gene3D:1.10.8.20	Gene3D:3.40.525.10	InterPro:CRAL-TRIO_dom	InterPro:CRAL-TRIO_dom_sf
InterPro:CRAL/TRIO_N_dom	InterPro:CRAL/TRIO_N_dom_sf	InterPro:IPR001251	InterPro:IPR036865	PANTHER:PTHR23324	PANTHER:PTHR23324:SF73
PFAM:PF00650	PFAM:PF03765	PFscan:PS50191	PRINTS:PR00180	SMART:SM00516	SMART:SM01100
SUPFAM:SSF46938	SUPFAM:SSF52087	TIGR:cd00170	MapMan:35.1	:	:

Description

No Description!

Coordinates

chr6B:-:561287606..561293080

Molecular Weight (calculated)

70594.0 Da

IEP (calculated)

7.453

GRAVY (calculated)

-0.633

Length

619 amino acids

Sequence
(BLAST)

001: VSESNIDGIE ISVSNDERRD RADAENSEDE PKHRRMRSLR KKALHASTKL THSLKKRGKR KVDCRVPRIP IEDVRDAGEE QAVSSFREVL FARNLLPERH
101: DDYHMMLRFL KARKFDVEKA AQMWDEMLQW RNEFGTDTIL EDFEFHELEE VLQYYPQGYH GVDKDGRPVY IELLGKVEPN KLVQTTTVER YIKYHVQEFE
201: RAFREKFPAC SISAQKHIDT TTTILDVHGV GWKNFGKIAR DLVRCMQKID GDYYPETLHQ MFIVNAGAGF KLIWSTIKGL LDPKTSSKIH VLGAKYQSRL
301: LEAIDASQLP EFFGGLCTCS NQGGCLRSNK GPWSDPLIMK IVHSMESSAL RDIVQVSDIE ETITGSVRLR ALKLPERISD TSNAESGSDV DDLGSPVAPE
401: DVEYHSLAPV REEARESGST TYGCSDDRPL SVDKAVESNK RSNVAGNVLR QYNTRQNSSM NRVSPEPAGR APNVREGDAD DGILKLFSRK VLAVILKVLS
501: LLRLFTRHQR QLENVHPHTA AVPSNQPNLQ IVKEDRVNPC LERLERLESM CNQLSRKPPE IPQDKDRAIQ DSFDRIKSIE FDLEKTKKVL HATVIKQMQM
601: AETLESVTES GHRRRKFCT

Best Arabidopsis Sequence Match ( AT2G21520.1 )
(BLAST)

001: MSGPLDRFAR PCFEGFLSSD EKKERKSDFE NSEDERRTRI GSLKKKAINA STKFKHSLKK KSGRRKSDGR VSSVSIEDVR DVEELQAVDA FRQSLLMDEL
101: LPDRHDDYHM MLRFLKARKF DVEKAKQMWA DMIQWRKEFG TDTIIQDFDF EEINEVLKHY PQCYHGVDKE GRPIYIERLG KVDPNRLMQV TSMDRYVRYH
201: VKEFERSFMI KFPSCTISAK RHIDSSTTIL DVQGVGLKNF NKSARDLITR LQKIDGDNYP ETLHQMFIIN AGPGFRLLWN TVKSFLDPKT SAKIHVLGYK
301: YLSKLLEVID VNELPEFLGG ACTCADQGGC MLSDKGPWKN PEIVKMVLHG GAHRARQVVK VLNSEGKVIA YAKPSYTWIK GSDTSTAESG SDAEDIGSPK
401: AIKSFSHLRL TPVREEAKIA GETSLAGSFP GYDEYVPMVD KAVDATWKVK PAIQRVASRG ALMSPTVPKD HEGIKARVLV MFMAFLMAVF TFFRTVTKKL
501: PATTTSSPAE TQGNAIELGS NGEGVKEECR PPSPVPDLTE TDLLNCVTKK LTELEGKIGT LQSKPNEMPY EKEELLNAAV CRVDALEAEL IATKKALYEA
601: LMRQEELLAY IDRQEEAQFQ KMKKKKKKHL FCF

Arabidopsis Description

Sec14p-like phosphatidylinositol transfer family protein [Source:UniProtKB/TrEMBL;Acc:B3H588]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.