Factsheet for TraesCS2B01G533900.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 2
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G506400.1	Wheat	nucleus	96.51	96.05
HORVU7Hr1G037200.1	Barley	nucleus	32.54	95.79
HORVU1Hr1G088100.1	Barley	cytosol	24.29	95.03
HORVU3Hr1G112740.3	Barley	nucleus	32.86	92.41
HORVU7Hr1G040650.2	Barley	cytosol, nucleus, plastid	31.75	89.29
KXG40069	Sorghum	nucleus	83.81	83.81
Os08t0341700-01	Rice	nucleus	84.44	83.52
Zm00001d050131_P002	Maize	cytosol	74.29	73.24
GSMUA_Achr7P06190_001	Banana	cytosol	58.57	63.95
GSMUA_Achr3P11960_001	Banana	cytosol, plastid	60.32	62.3
TraesCS6B01G313500.1	Wheat	cytosol	53.97	54.93
VIT_19s0015g01160.t01	Wine grape	cytosol	52.86	53.62
KRH62508	Soybean	cytosol	51.9	52.74
KRH45371	Soybean	cytosol	36.83	52.73
KRH56402	Soybean	cytosol	51.59	52.42
HORVU1Hr1G091860.1	Barley	cytosol	13.33	51.53
TraesCS7B01G135600.2	Wheat	plastid	54.29	51.27
Solyc07g066090.2.1	Tomato	nucleus	49.52	50.32
PGSC0003DMT400057292	Potato	nucleus	49.21	50.16
KRH07662	Soybean	cytosol	48.73	49.6
CDY11954	Canola	cytosol	15.08	48.72
CDY11957	Canola	cytosol	34.29	48.54
TraesCS6B01G125600.1	Wheat	cytosol, nucleus, plastid	48.25	48.25
AT1G55690.4	Thale cress	nucleus	47.62	48.0
CDY42378	Canola	nucleus	48.1	47.12
CDY10540	Canola	cytosol, nucleus, plastid	48.1	47.12
Solyc10g005740.1.1	Tomato	nucleus	46.03	46.93
Bra030841.1-P	Field mustard	nucleus	43.81	46.08
TraesCS1B01G384500.1	Wheat	cytosol, nucleus, plastid	44.92	45.57
CDY50018	Canola	vacuole	46.03	45.38
PGSC0003DMT400022405	Potato	cytosol, nucleus	41.11	44.5
CDY51073	Canola	mitochondrion, nucleus	34.92	43.05
TraesCS2B01G354800.2	Wheat	nucleus	40.0	42.64
AT5G56160.1	Thale cress	cytosol	38.57	42.11
CDY51966	Canola	cytosol	39.68	42.02
Bra002841.1-P	Field mustard	cytosol	34.76	41.87
CDY17397	Canola	cytosol	39.52	41.85
TraesCS3B01G287000.6	Wheat	cytosol	41.9	41.38
TraesCS2B01G527900.2	Wheat	mitochondrion	25.71	41.12
CDY36780	Canola	plastid	35.4	39.12
TraesCS6B01G125700.1	Wheat	plastid	37.46	38.37
Bra038012.1-P	Field mustard	cytosol	45.87	27.32
Bra028944.1-P	Field mustard	plastid	29.68	26.87
TraesCS5B01G166800.1	Wheat	cytosol	13.97	26.27
TraesCS6B01G188100.1	Wheat	cytosol	13.17	25.38
TraesCS7B01G280200.2	Wheat	cytosol	12.86	24.92
Bra002840.1-P	Field mustard	cytosol	0.16	1.3
CDY36781	Canola	extracellular	0.16	0.6

Protein Annotations

EnsemblPlants:TraesCS2B01G533900.1	EnsemblPlantsGene:TraesCS2B01G533900	Gene3D:1.10.8.20	Gene3D:3.40.525.10	InterPro:CRAL-TRIO_dom	InterPro:CRAL-TRIO_dom_sf
InterPro:CRAL/TRIO_N_dom	InterPro:CRAL/TRIO_N_dom_sf	InterPro:IPR001251	InterPro:IPR036865	PANTHER:PTHR23324	PANTHER:PTHR23324:SF95
PFAM:PF00650	PFAM:PF03765	PFscan:PS50191	PRINTS:PR00180	SEG:seg	SMART:SM00516
SMART:SM01100	SUPFAM:SSF46938	SUPFAM:SSF52087	TIGR:cd00170	MapMan:35.1	:

Description

No Description!

Coordinates

chr2B:+:730187679..730191682

Molecular Weight (calculated)

71972.2 Da

IEP (calculated)

8.765

GRAVY (calculated)

-0.561

Length

630 amino acids

Sequence
(BLAST)

001: MSVRRRSEST EGLFLFDERK DRRSDVENSE DERRRLSIGG SLKKKALNAS SKLTHSLKKR GKRKVEHRAS SFTIEDVRDE EEERAVFTFQ QELLSRNLLC
101: DKQNDYHMLL RFLKARKFDT EKAIHMWAEM LQWRKEFGAD TILEDFVFEE LDEVLSYYPQ GYHGVDRQGR PVYIERLGKV DPNKLMNITT VDRYIKYHVQ
201: EFERAFLDKF PACSIAAKRH IDSTTTILDV EGVGFKNFSK TAREMLTRMQ KIDSDYYPET LHQMFVVNAG GGFKLLWNSV KGFLDPKTVS KIHVLGTKFQ
301: SKLLEVIDGS QLPEFLGGTC TCAGEGGCLK SNKGPWNDPN IMKVAHNKEA KFVRHTRRLS EIEQRRGSFA RLHLLKGRNS DTSTAESGSD VDDLGSPMMR
401: STLGCSRLAP VREEMQMRAR ESAAYYSCDD HFVVVDKTVD YGRGGSMPDK SSAPQVRVQA QPLGTQNTPG SSRNSRGILV PKEIPEEGKF YRFLRLLLVL
501: VVRVFTFLRT VCSQPETTIV NNPLPPAPEF EPISGDNPAV EAFSVDRVSP VIERLQKLEG RVDELGSKPP EIPLEKERSL LDSWDRIKCI ESDLERTKKV
601: LQATVMKQLE IADSVEEVIL SKLHRRRFCA

Best Arabidopsis Sequence Match ( AT2G21520.1 )
(BLAST)

001: MSGPLDRFAR PCFEGFLSSD EKKERKSDFE NSEDERRTRI GSLKKKAINA STKFKHSLKK KSGRRKSDGR VSSVSIEDVR DVEELQAVDA FRQSLLMDEL
101: LPDRHDDYHM MLRFLKARKF DVEKAKQMWA DMIQWRKEFG TDTIIQDFDF EEINEVLKHY PQCYHGVDKE GRPIYIERLG KVDPNRLMQV TSMDRYVRYH
201: VKEFERSFMI KFPSCTISAK RHIDSSTTIL DVQGVGLKNF NKSARDLITR LQKIDGDNYP ETLHQMFIIN AGPGFRLLWN TVKSFLDPKT SAKIHVLGYK
301: YLSKLLEVID VNELPEFLGG ACTCADQGGC MLSDKGPWKN PEIVKMVLHG GAHRARQVVK VLNSEGKVIA YAKPSYTWIK GSDTSTAESG SDAEDIGSPK
401: AIKSFSHLRL TPVREEAKIA GETSLAGSFP GYDEYVPMVD KAVDATWKVK PAIQRVASRG ALMSPTVPKD HEGIKARVLV MFMAFLMAVF TFFRTVTKKL
501: PATTTSSPAE TQGNAIELGS NGEGVKEECR PPSPVPDLTE TDLLNCVTKK LTELEGKIGT LQSKPNEMPY EKEELLNAAV CRVDALEAEL IATKKALYEA
601: LMRQEELLAY IDRQEEAQFQ KMKKKKKKHL FCF

Arabidopsis Description

Sec14p-like phosphatidylinositol transfer family protein [Source:UniProtKB/TrEMBL;Acc:B3H588]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.