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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 7
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 5
  • golgi 5
  • plastid 2
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:plastid, secretory
BaCelLo:secretory
ChloroP:plastid
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra028944.1-P Field mustard plastid 98.81 23.85
Zm00001d045670_P001 Maize cytosol 1.79 1.6
CDY11957 Canola cytosol 1.79 0.67
CDX69225 Canola mitochondrion 2.38 0.66
CDY02262 Canola cytosol, plastid 5.36 0.62
CDY36780 Canola plastid 1.79 0.53
AT5G56160.1 Thale cress cytosol 1.79 0.52
CDY51966 Canola cytosol 1.79 0.5
CDY17730 Canola cytosol 1.19 0.5
CDX77773 Canola cytosol 1.19 0.49
CDY51073 Canola mitochondrion, nucleus 1.19 0.39
CDY52084 Canola cytosol 1.19 0.34
CDY17397 Canola cytosol 1.19 0.34
Os02t0721800-01 Rice cytosol 1.19 0.33
Zm00001d051674_P037 Maize cytosol 1.19 0.33
KXG30865 Sorghum cytosol 1.19 0.32
Zm00001d017876_P018 Maize cytosol 1.19 0.32
HORVU6Hr1G071770.19 Barley cytosol 1.19 0.32
TraesCS6B01G313500.1 Wheat cytosol 1.19 0.32
CDX77382 Canola cytosol 1.19 0.32
TraesCS6D01G265200.1 Wheat cytosol 1.19 0.32
TraesCS6A01G284800.1 Wheat cytosol 1.19 0.32
GSMUA_Achr3P04130_001 Banana nucleus 1.19 0.32
CDX89709 Canola cytosol, mitochondrion 0.6 0.22
CDX90317 Canola cytosol 0.6 0.19
GSMUA_Achr7P06190_001 Banana cytosol 0.6 0.17
CDY39363 Canola cytosol 0.6 0.17
Zm00001d005995_P003 Maize nucleus 0.6 0.17
EER96946 Sorghum cytosol, nucleus, plastid 0.6 0.17
CDX82040 Canola cytosol 0.6 0.17
Os08t0497300-01 Rice cytosol, plastid 0.6 0.17
TraesCS7D01G238000.2 Wheat cytosol 0.6 0.17
CDX85889 Canola cytosol 0.6 0.16
OQU80990 Sorghum cytosol 0.6 0.16
CDX68133 Canola cytosol 0.6 0.16
GSMUA_Achr3P11960_001 Banana cytosol, plastid 0.6 0.16
Os09t0481100-01 Rice nucleus 0.6 0.16
CDY29415 Canola nucleus 0.6 0.16
CDY12125 Canola cytosol 0.6 0.16
CDX90316 Canola cytosol 0.6 0.16
KXG40069 Sorghum nucleus 0.6 0.16
TraesCS2B01G533900.1 Wheat nucleus 0.6 0.16
CDY13810 Canola cytosol 0.6 0.16
TraesCS2D01G506400.1 Wheat nucleus 0.6 0.16
Os08t0341700-01 Rice nucleus 0.6 0.16
CDY50018 Canola vacuole 0.6 0.16
Zm00001d050131_P002 Maize cytosol 0.6 0.16
CDY42378 Canola nucleus 0.6 0.16
CDY10540 Canola cytosol, nucleus, plastid 0.6 0.16
Zm00001d031316_P020 Maize cytosol 0.6 0.16
HORVU7Hr1G048880.11 Barley mitochondrion 0.6 0.15
TraesCS7B01G135600.2 Wheat plastid 0.6 0.15
TraesCS7A01G240000.3 Wheat endoplasmic reticulum, plastid 0.6 0.15
Zm00001d052840_P016 Maize plastid 0.6 0.14
Zm00001d035770_P002 Maize cytosol, endoplasmic reticulum 0.0 0.0
Zm00001d005778_P001 Maize plastid 0.0 0.0
CDY17710 Canola cytosol 0.0 0.0
Zm00001d008240_P001 Maize cytosol, extracellular, mitochondrion, nucleus 0.0 0.0
Zm00001d010393_P001 Maize plastid 0.0 0.0
Zm00001d012531_P001 Maize mitochondrion 0.0 0.0
Zm00001d014589_P001 Maize cytosol 0.0 0.0
CDX75444 Canola cytosol 0.0 0.0
Zm00001d031251_P001 Maize cytosol, mitochondrion 0.0 0.0
CDY17469 Canola cytosol 0.0 0.0
Zm00001d035370_P003 Maize plastid 0.0 0.0
CDY11954 Canola cytosol 0.0 0.0
Zm00001d037983_P001 Maize cytosol 0.0 0.0
Zm00001d039981_P001 Maize cytosol 0.0 0.0
Zm00001d043774_P001 Maize cytosol 0.0 0.0
CDX69071 Canola cytosol 0.0 0.0
Zm00001d045718_P001 Maize cytosol 0.0 0.0
Zm00001d047488_P001 Maize nucleus 0.0 0.0
CDY15888 Canola cytosol 0.0 0.0
CDY15887 Canola cytosol 0.0 0.0
CDY12126 Canola cytosol 0.0 0.0
CDX99587 Canola cytosol, mitochondrion 0.0 0.0
HORVU1Hr1G091860.1 Barley cytosol 0.0 0.0
HORVU3Hr1G112740.3 Barley nucleus 0.0 0.0
GSMUA_Achr8P24430_001 Banana endoplasmic reticulum 0.0 0.0
HORVU7Hr1G037200.1 Barley nucleus 0.0 0.0
HORVU7Hr1G040650.2 Barley cytosol, nucleus, plastid 0.0 0.0
GSMUA_Achr5P04200_001 Banana plastid 0.0 0.0
GSMUA_Achr4P09770_001 Banana cytosol 0.0 0.0
CDY53762 Canola cytosol 0.0 0.0
CDY52903 Canola cytosol 0.0 0.0
CDX99586 Canola cytosol 0.0 0.0
HORVU1Hr1G088100.1 Barley cytosol 0.0 0.0
CDY10527 Canola cytosol 0.0 0.0
CDY45318 Canola cytosol, plastid 0.0 0.0
CDY42389 Canola cytosol 0.0 0.0
CDY41066 Canola cytosol 0.0 0.0
CDY40544 Canola cytosol 0.0 0.0
CDX77792 Canola cytosol 0.0 0.0
CDX76291 Canola cytosol 0.0 0.0
CDY28908 Canola cytosol 0.0 0.0
CDY25949 Canola cytosol 0.0 0.0
Protein Annotations
EnsemblPlants:CDY36781EnsemblPlantsGene:GSBRNA2T00062613001GO:A0A078HGA4GO:GO:0005575GO:GO:0016020GO:GO:0016021
PANTHER:PTHR31533PANTHER:PTHR31533:SF2ProteinID:CDY36781ProteinID:CDY36781.1SEG:segSignalP:SignalP-noTM
TMHMM:TMhelixUniParc:UPI0004EEDBDDUniProt:A0A078HGA4MapMan:11.10.2.4.3::
Description
BnaA03g11050DBnaA03g11050D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HGA4]
Coordinates
chrLK032383:+:240043..241428
Molecular Weight (calculated)
18180.0 Da
IEP (calculated)
6.265
GRAVY (calculated)
0.403
Length
168 amino acids
Sequence
(BLAST)
001: MSLKFVSGAL FFCLLLSIFP SFSSSSFISD GVFGSQALVT GRNLLQTKKT CPVNFEFMNY TIITSQCKGP KFPVKECCSA FLDFACPYTE QLNDLSNDCA
101: TTMFSYINLY GQYPPGLFAN QCKGGKEGLE CPAMSPASAA DVNAAVNTAS TSLWLTIFAA LLVFVKLL
Best Arabidopsis Sequence Match ( AT5G56170.1 )
(BLAST)
001: MELLSRALFF FLLLSVLSSF SSSSFISDGV FESQSLVLGR NLLQTKKTCP VNFEFMNYTI ITSKCKGPKY PPKECCGAFK DFACPYTDQL NDLSSDCATT
101: MFSYINLYGK YPPGLFANQC KEGKEGLECP AGSQLPPETS AEVNAATTSS SRLWLTVSAA LLVFVKLF
Arabidopsis Description
LLG1LLG1 [Source:UniProtKB/TrEMBL;Acc:A0A178USL6]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.