CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, mitochondrion

Predictor Summary:

cytosol 3
mitochondrion 3
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT2G16380.1	Thale cress	cytosol	81.54	67.82
CDX69071	Canola	cytosol	74.07	63.11
CDX75444	Canola	cytosol	74.07	63.11
CDY15888	Canola	cytosol	38.46	61.84
CDX99587	Canola	cytosol, mitochondrion	38.02	61.13
CDY45318	Canola	cytosol, plastid	66.81	60.8
CDY17469	Canola	cytosol	75.16	59.89
CDX76291	Canola	cytosol	75.16	57.77
CDY15887	Canola	cytosol	59.12	49.0
CDX99586	Canola	cytosol	59.12	48.91
CDY12126	Canola	cytosol	57.14	48.6
CDX90317	Canola	cytosol	56.92	48.23
CDY11954	Canola	cytosol	19.56	45.64
KRH24439	Soybean	plastid	32.31	44.82
PGSC0003DMT400001903	Potato	cytosol, nucleus, plastid	56.48	44.77
PGSC0003DMT400043532	Potato	cytosol	54.73	44.7
Solyc01g109860.2.1	Tomato	cytosol, nucleus, plastid	56.26	44.6
KRH29420	Soybean	cytosol, nucleus, plastid	55.16	44.58
Solyc10g053900.1.1	Tomato	cytosol, plastid	55.6	44.46
KRH51503	Soybean	cytosol	55.38	43.98
OQU84321	Sorghum	cytosol	54.07	43.62
PGSC0003DMT400021690	Potato	nucleus	57.58	43.38
Solyc11g040280.1.1	Tomato	cytosol	56.92	43.31
KRH60806	Soybean	cytosol	53.85	42.83
TraesCS2D01G335700.2	Wheat	nucleus	54.95	42.3
TraesCS2A01G327200.2	Wheat	nucleus	54.73	42.13
Os02t0440900-00	Rice	cytosol	55.16	41.97
TraesCS2B01G354800.2	Wheat	nucleus	54.51	41.96
HORVU2Hr1G082530.1	Barley	cytosol	52.97	41.62
Os10t0122600-01	Rice	cytosol, nucleus, plastid	54.29	41.3
GSMUA_Achr6P03210_001	Banana	cytosol	53.85	41.25
Zm00001d016601_P006	Maize	cytosol	54.51	40.99
GSMUA_Achr5P23630_001	Banana	cytosol	54.07	40.86
OQU85018	Sorghum	nucleus	54.73	40.62
Os02t0133200-01	Rice	plasma membrane	54.07	38.92
TraesCS6A01G097200.1	Wheat	plastid	52.09	38.66
Zm00001d015175_P002	Maize	plastid	54.29	38.29
CDY39363	Canola	cytosol	49.67	38.18
HORVU6Hr1G017580.5	Barley	plastid	52.53	38.06
TraesCS6D01G085200.1	Wheat	plastid	51.43	38.05
TraesCS6B01G125700.1	Wheat	plastid	51.43	38.05
CDX90316	Canola	cytosol	51.43	37.86
CDY12125	Canola	cytosol	51.21	37.82
CDX69225	Canola	mitochondrion	50.11	37.56
GSMUA_Achr2P14280_001	Banana	cytosol, nucleus, plastid	53.63	36.97
CDY17730	Canola	cytosol	32.53	36.82
CDY29415	Canola	nucleus	49.67	36.75
CDX82040	Canola	cytosol	48.57	36.65
CDX68133	Canola	cytosol	48.35	36.18
CDX77773	Canola	cytosol	32.31	36.12
CDX85889	Canola	cytosol	48.13	36.08
CDY13810	Canola	cytosol	49.45	35.6
CDY11957	Canola	cytosol	34.51	35.28
CDY52084	Canola	cytosol	39.56	30.66
CDY02262	Canola	cytosol, plastid	96.7	30.53
CDY51966	Canola	cytosol	38.46	29.41
CDX77382	Canola	cytosol	39.78	29.24
CDY50018	Canola	vacuole	40.66	28.95
CDY17397	Canola	cytosol	37.8	28.91
CDY36780	Canola	plastid	35.82	28.6
CDY42378	Canola	nucleus	39.78	28.15
CDY10540	Canola	cytosol, nucleus, plastid	39.34	27.84
CDY51073	Canola	mitochondrion, nucleus	31.21	27.79
CDY52903	Canola	cytosol	15.82	22.02
CDY53762	Canola	cytosol	15.82	22.02
CDY28908	Canola	cytosol	15.82	21.75
CDY42389	Canola	cytosol	15.38	21.54
CDY40544	Canola	cytosol	15.6	21.52
CDX77792	Canola	cytosol	15.6	21.26
CDY25949	Canola	cytosol	15.38	21.02
CDY41066	Canola	cytosol	15.38	21.02
CDY10527	Canola	cytosol	14.95	20.92
CDY17710	Canola	cytosol	15.16	20.66
CDY36781	Canola	extracellular	0.22	0.6

Protein Annotations

Gene3D:1.10.8.20	Gene3D:3.40.525.10	MapMan:35.1	GO:A0A078DMC3	EnsemblPlants:CDX89709	ProteinID:CDX89709
ProteinID:CDX89709.1	InterPro:CRAL-TRIO_dom	InterPro:CRAL-TRIO_dom_sf	InterPro:CRAL/TRIO_N_dom_sf	ncoils:Coil	EnsemblPlantsGene:GSBRNA2T00150117001
InterPro:IPR001251	InterPro:IPR036865	PFAM:PF00650	PRINTS:PR00180	PFscan:PS50191	PANTHER:PTHR23324
PANTHER:PTHR23324:SF77	SMART:SM00516	SUPFAM:SSF46938	SUPFAM:SSF52087	TMHMM:TMhelix	UniParc:UPI0004EE9895
SEG:seg	:	:	:	:	:

Description

BnaC03g46230DPhosphatidylinositol/phosphatidylcholine transfer protein SFH7 [Source:Projected from Arabidopsis thaliana (AT2G16380) UniProtKB/Swiss-Prot;Acc:Q9SIW3]

Coordinates

chrLK031860:+:998864..1002882

Molecular Weight (calculated)

52384.6 Da

IEP (calculated)

9.456

GRAVY (calculated)

-0.595

Length

455 amino acids

Sequence
(BLAST)

001: MMLRFLRARK LDTEKAKQMW SDMLQWRKDF GADTIIEDFE FEEIDEVVKH YPQGYHGVDK EGRPVYIERL GQIDANKLLQ VTTMDRYEKY HVKEFEKMFN
101: IKFPSCSAAA KKHIDQSTTI FDVQGVGLKN FNKCARELLQ RLLKIDNDNY PETLNRMFII NAGPGFRLLW GPVKSFLDPK TTSKIHVLGN KYQSKLLEAI
201: DASELPHFFG GRCTCEDKGG CMRSDKGPWN DPEILKMVKN PEAKFSTISE DERILVEDER LMVFEPLERK KKRTIKVNVS EKHIATVDKF MALSLPEKPP
301: KTVKRGNGLP KKDDGFLVGG VIAFVMGILA MVRLSKHVPR KLTEAALFGN SVYNDESKIT KPYQDQLSTP VSSSEYVLMA KRMSDLEEKY MSLDSKPADD
401: GLEKEDKLQA ALNRVQVLEQ ELSETKRALD ETITKQNGIL EYIEKKKKKK KRLVR

Best Arabidopsis Sequence Match ( AT2G16380.1 )
(BLAST)

001: MADTKQDMEN SEDGRKLVKM SSLKQKAISA SNRFKNSFKK KTRRTSSKIV SVANTDDING DDYLSVEAFR QVLVLDDLLP PKHDDLHMML RFLRARKFDK
101: EKAKQMWSDM LQWRMDFGVD TIIEDFEFEE IDQVLKHYPQ GYHGVDKEGR PVYIERLGQI DANKLLQATT MDRYEKYHVK EFEKMFKIKF PSCSAAAKKH
201: IDQSTTIFDV QGVGLKNFNK SARELLQRLL KIDNDNYPET LNRMFIINAG PGFRLLWAPI KKFLDPKTTS KIHVLGNKYQ PKLLEAIDAS ELPYFFGGLC
301: TCADKGGCLR SDKGPWNDPE LLKIARNPEA RFSTISEEDY LLVEEGTSMS MVFEPLERNK MKTIEENVSE KHIDAVDKFM ALSLPPKPHL KTLRKGKEPQ
401: KKDDSFLVGG VIAFVMGIVA MLRLSKAVPR KLTDVALLTN SVYYEEAKMS KPNQDEVSAP PVSSSEYVIM VKRMAELEEK YKSLDSKSAD EALEKDDKLQ
501: AALNRVQVLE HELSETKKAL DETMVNQQGI LAYIEKKNKK KRMFFRF

Arabidopsis Description

SFH7Phosphatidylinositol/phosphatidylcholine transfer protein SFH7 [Source:UniProtKB/Swiss-Prot;Acc:Q9SIW3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.