CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:

nucleus 2
mitochondrion 1
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, plastid
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH24439	Soybean	plastid	43.52	74.7
KRH60806	Soybean	cytosol	75.13	73.95
KRH51503	Soybean	cytosol	74.6	73.3
AT2G21540.2	Thale cress	cytosol, nucleus, vacuole	61.28	62.96
CDY15887	Canola	cytosol	60.92	62.48
CDX99586	Canola	cytosol	60.92	62.36
KRH76738	Soybean	plastid	53.11	62.16
PGSC0003DMT400001903	Potato	cytosol, nucleus, plastid	63.06	61.85
KRH28724	Soybean	plastid	52.93	61.7
Solyc01g109860.2.1	Tomato	cytosol, nucleus, plastid	62.7	61.5
Bra030294.1-P	Field mustard	cytosol, nucleus, plastid	52.93	61.07
CDY12126	Canola	cytosol	56.66	59.63
PGSC0003DMT400043532	Potato	cytosol	58.61	59.25
Bra010699.1-P	Field mustard	cytosol	56.31	59.03
KRH08168	Soybean	plastid	58.08	58.92
CDX90317	Canola	cytosol	56.13	58.85
AT4G39180.1	Thale cress	cytosol	57.9	58.84
KRH69861	Soybean	plastid	57.9	58.74
Solyc10g053900.1.1	Tomato	cytosol, plastid	58.79	58.17
CDX75444	Canola	cytosol	54.71	57.68
CDX69071	Canola	cytosol	54.35	57.3
Bra034638.1-P	Field mustard	cytosol	55.06	56.99
Solyc11g040280.1.1	Tomato	cytosol	60.21	56.69
PGSC0003DMT400021690	Potato	nucleus	60.75	56.62
AT4G34580.2	Thale cress	cytosol	55.59	56.5
CDY45318	Canola	cytosol, plastid	49.2	55.4
Bra011544.1-P	Field mustard	cytosol, plastid	48.67	55.35
CDX89709	Canola	cytosol, mitochondrion	44.58	55.16
CDY17469	Canola	cytosol	55.24	54.47
Bra017663.1-P	Field mustard	cytosol, plastid	43.52	53.73
GSMUA_Achr5P23630_001	Banana	cytosol	57.37	53.65
AT2G16380.1	Thale cress	cytosol	51.33	52.83
CDX76291	Canola	cytosol	55.42	52.7
GSMUA_Achr6P03210_001	Banana	cytosol	55.24	52.36
Os02t0440900-00	Rice	cytosol	54.0	50.84
TraesCS2B01G354800.2	Wheat	nucleus	53.29	50.76
HORVU2Hr1G082530.1	Barley	cytosol	52.04	50.6
Os10t0122600-01	Rice	cytosol, nucleus, plastid	53.64	50.5
TraesCS2A01G327200.2	Wheat	nucleus	52.75	50.25
TraesCS2D01G335700.2	Wheat	nucleus	52.58	50.08
OQU84321	Sorghum	cytosol	50.09	50.0
KRH24438	Soybean	cytosol	55.77	49.92
KRH29416	Soybean	cytosol	55.59	49.76
KRH51809	Soybean	nucleus	52.04	49.49
KRH60804	Soybean	cytosol	54.53	49.2
OQU85018	Sorghum	nucleus	53.29	48.94
GSMUA_Achr2P14280_001	Banana	cytosol, nucleus, plastid	57.37	48.94
KRH61132	Soybean	cytosol	51.15	48.65
Zm00001d016601_P006	Maize	cytosol	52.22	48.59
KRH05860	Soybean	cytosol	53.11	47.84
KRG99756	Soybean	cytosol	32.68	47.79
KRH15161	Soybean	cytosol	53.29	47.62
TraesCS6B01G125700.1	Wheat	plastid	51.69	47.32
KRH51499	Soybean	cytosol	53.82	47.27
TraesCS6D01G085200.1	Wheat	plastid	51.33	46.99
TraesCS6A01G097200.1	Wheat	plastid	50.98	46.82
Os02t0133200-01	Rice	plasma membrane	52.22	46.52
Zm00001d015175_P002	Maize	plastid	52.58	45.89
HORVU6Hr1G017580.5	Barley	plastid	51.15	45.86
KRG99773	Soybean	cytosol, nucleus, plastid	42.45	40.24
KRH46724	Soybean	cytosol, nucleus, plastid	42.1	39.9
KRH77370	Soybean	cytosol	32.68	39.74
KRH45371	Soybean	cytosol	30.91	39.55
KRH28067	Soybean	cytosol	32.15	39.35
KRH62508	Soybean	cytosol	39.25	35.65
KRH56402	Soybean	cytosol	38.72	35.16
KRH07662	Soybean	cytosol	38.54	35.06
KRG99658	Soybean	cytosol, nucleus, plastid	3.73	27.63
KRG99659	Soybean	cytosol, nucleus, plastid	3.73	27.63
KRH51210	Soybean	cytosol	15.28	26.46
KRH01941	Soybean	cytosol	15.1	26.23
KRH36621	Soybean	cytosol	14.92	25.53
KRH11617	Soybean	cytosol	14.56	24.92
KRH14208	Soybean	cytosol	14.03	24.53
KRH73923	Soybean	cytosol	9.06	24.29
KRH46410	Soybean	cytosol	14.21	23.67
KRH65859	Soybean	cytosol	5.86	23.08
KRG82898	Soybean	cytosol	7.64	22.87
KRH46406	Soybean	cytosol	10.48	22.78
KRH75081	Soybean	extracellular, mitochondrion	4.97	22.76
KRH46400	Soybean	cytosol	10.12	21.19
KRG98457	Soybean	cytosol	14.39	19.76
CDY02262	Canola	cytosol, plastid	50.44	19.71
Bra013077.1-P	Field mustard	cytosol, plastid	50.44	19.47
KRG99755	Soybean	endoplasmic reticulum	6.39	18.37
KRG82897	Soybean	cytosol	3.37	17.43

Protein Annotations

Gene3D:1.10.8.20	EntrezGene:100792335	Gene3D:3.40.525.10	MapMan:35.1	UniProt:A0A0R0HFM1	EMBL:ACUP02006800
InterPro:CRAL-TRIO_dom	InterPro:CRAL-TRIO_dom_sf	InterPro:CRAL/TRIO_N_dom	InterPro:CRAL/TRIO_N_dom_sf	ncoils:Coil	EnsemblPlantsGene:GLYMA_11G115100
GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006810
GO:GO:0008150	InterPro:IPR001251	InterPro:IPR036865	EnsemblPlants:KRH29420	ProteinID:KRH29420	ProteinID:KRH29420.1
PFAM:PF00650	PFAM:PF03765	PRINTS:PR00180	PFscan:PS50191	PANTHER:PTHR23324	PANTHER:PTHR23324:SF144
SMART:SM00516	SMART:SM01100	SUPFAM:SSF46938	SUPFAM:SSF52087	TMHMM:TMhelix	UniParc:UPI0006EDA5FB
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr11:-:8797813..8801835

Molecular Weight (calculated)

64085.7 Da

IEP (calculated)

8.584

GRAVY (calculated)

-0.475

Length

563 amino acids

Sequence
(BLAST)

001: MCDTMSMSSA PITDHRPVKG LEMEYVEDDK KKKLGSLKKV AISASSKFRH SLQMKGRRHS RVVSVAIEDN VDAQELQVVD AFRQALILEE LLPAKYDDHH
101: TMLRFLRARK FDIEKTKQMW ADMLQWRREF GADTIMEDFE FKERDEVQKY YPQGHHGVDK EGRPVYIEKL GQVDSNKLMQ VTTMDRYLKY HVREFEKTFV
201: VKFPACSISA KKHIDQSTTI LDVQGVGLKS LNKAARDLIQ RLQKIDGDNY PESLNSMFII NAGSGFRMLW NSIKSFLDPK TTSKIHVLGN KYQSKLLEII
301: DASELPEFLG GTCTCADKGG CMLSDKGPWN DIEILKMVQN GEGKCKRKTL SGIEEKTIIQ DEIACQKEHD PFNKESVQLG AVPEVAFVPV IDKQVNASWE
401: KAVQNNQLAA SKAADCFPSD ASNTFNGFRI PFTGGIITIL MGVITMLRMT RNMPRKVTEA TALYANPLYC DGNMMKAPAI SMNDQMALMK RMAELEEKVN
501: VLSMKPTMPP EMEELLNNAL NRVNTLEQEL DSTKKSLDDA LARQVELQAH LDKKKKKKKF FRW

Best Arabidopsis Sequence Match ( AT2G21540.1 )
(BLAST)

001: MTDTMSAHMD RHNKLDYDGS EDEKKTKLCS LKKKAINASN KFKHSFTKRT RRNSRVMSVS IVDDIDLEEL QAVDAFRQAL ILDELLPSKH DDHHMMLRFL
101: RARKFDLEKA KQMWTDMIHW RKEFGVDTIM EDFDFKEIDE VLKYYPQGYH GVDKDGRPVY IERLGQVDAT KLMQVTTIDR YVKYHVREFE KTFNIKLPAC
201: SIAAKKHIDQ STTILDVQGV GLKSFSKAAR DLLQRIQKID SDNYPETLNR MFIINAGSGF RLLWSTVKSF LDPKTTAKIH VLGNKYQSKL LEIIDSNELP
301: EFLGGNCTCA DKGGCMRSDK GPWNDPDIFK MVQNGEGKCP RKTLSNIEEK TISVDENTTM KSDSFAKNKF DAENTKFIPM IDKTVNASTW PTNLHKSNYP
401: EPEDLYSAVK PSQRRGGEGY LFGGVMSLVM GLMTVVRLTK NMPRKLTEAA IYGGEVDKAE TTMVSNQEYM SMVKRMAELE EKCRSLDNQP AAFSPEKEQI
501: LTAALSRVDE LELQLAQTKK TLEETMATQH VIMAYIDKKK KKKKFFGF

Arabidopsis Description

SFH3Phosphatidylinositol/phosphatidylcholine transfer protein SFH3 [Source:UniProtKB/Swiss-Prot;Acc:Q93ZE9]
SUBAcon: [vacuole,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.