CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 5
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH28067	Soybean	cytosol	92.66	93.26
Zm00001d019582_P001	Maize	cytosol	37.58	54.38
VIT_02s0154g00510.t01	Wine grape	cytosol	45.14	54.29
AT5G47510.4	Thale cress	cytosol	42.55	52.25
Os07t0456500-01	Rice	cytosol	26.35	51.48
Solyc08g078680.2.1	Tomato	cytosol	51.62	49.79
Bra024938.1-P	Field mustard	cytosol	43.2	49.75
CDY17730	Canola	cytosol	43.2	49.75
GSMUA_AchrUn_...	Banana	mitochondrion	39.74	49.6
CDX77773	Canola	cytosol	42.98	48.89
TraesCS2D01G500100.2	Wheat	mitochondrion	40.39	47.83
TraesCS2B01G527900.2	Wheat	mitochondrion	40.6	47.72
TraesCS2A01G499900.1	Wheat	mitochondrion	40.39	47.58
HORVU2Hr1G111160.14	Barley	mitochondrion	40.39	47.46
OQU88968	Sorghum	cytosol	40.39	45.5
KRH28724	Soybean	plastid	39.31	37.68
KRG99756	Soybean	cytosol	31.32	37.66
KRH76738	Soybean	plastid	39.09	37.63
KRH24439	Soybean	plastid	26.57	37.5
KRH69861	Soybean	plastid	39.31	32.79
KRH29420	Soybean	cytosol, nucleus, plastid	39.74	32.68
KRH08168	Soybean	plastid	39.09	32.61
KRH51809	Soybean	nucleus	41.25	32.26
KRH61132	Soybean	cytosol	40.82	31.93
KRH45371	Soybean	cytosol	29.37	30.91
KRH24438	Soybean	cytosol	41.9	30.84
KRH29416	Soybean	cytosol	41.9	30.84
KRH60804	Soybean	cytosol	41.25	30.61
KRH51503	Soybean	cytosol	37.8	30.54
KRG99773	Soybean	cytosol, nucleus, plastid	38.88	30.3
KRH46724	Soybean	cytosol, nucleus, plastid	38.88	30.3
KRH60806	Soybean	cytosol	37.15	30.07
KRH15161	Soybean	cytosol	40.82	30.0
KRH05860	Soybean	cytosol	40.39	29.92
KRH51499	Soybean	cytosol	40.6	29.33
KRH62508	Soybean	cytosol	37.15	27.74
KRH56402	Soybean	cytosol	36.5	27.26
KRH07662	Soybean	cytosol	35.85	26.82
KRH51210	Soybean	cytosol	17.49	24.92
KRH01941	Soybean	cytosol	17.28	24.69
KRH36621	Soybean	cytosol	16.41	23.1
KRH65859	Soybean	cytosol	7.13	23.08
KRH11617	Soybean	cytosol	15.98	22.49
KRH14208	Soybean	cytosol	15.55	22.36
KRG82898	Soybean	cytosol	9.07	22.34
KRH75081	Soybean	extracellular, mitochondrion	5.83	21.95
KRH46410	Soybean	cytosol	15.98	21.89
KRH46406	Soybean	cytosol	12.1	21.62
KRH73923	Soybean	cytosol	9.5	20.95
KRH46400	Soybean	cytosol	11.45	19.7
KRG98457	Soybean	cytosol	16.2	18.29
KRG99659	Soybean	cytosol, nucleus, plastid	2.59	15.79
KRG99658	Soybean	cytosol, nucleus, plastid	2.59	15.79
KRG82897	Soybean	cytosol	3.46	14.68
KRG99755	Soybean	endoplasmic reticulum	3.89	9.18

Protein Annotations

Gene3D:1.10.8.20	EntrezGene:100797170	Gene3D:3.40.525.10	MapMan:35.1	EMBL:ACUP02000669	InterPro:CRAL-TRIO_dom
InterPro:CRAL-TRIO_dom_sf	InterPro:CRAL/TRIO_N_dom	InterPro:CRAL/TRIO_N_dom_sf	ncoils:Coil	EnsemblPlantsGene:GLYMA_01G209900	GO:GO:0003674
GO:GO:0005215	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006810	GO:GO:0008150
UniProt:I1J9W5	InterPro:IPR001251	InterPro:IPR036865	ProteinID:KRH77369.1	EnsemblPlants:KRH77370	ProteinID:KRH77370
ProteinID:KRH77370.1	ProteinID:KRH77371.1	PFAM:PF00650	PRINTS:PR00180	PFscan:PS50191	PANTHER:PTHR23324
PANTHER:PTHR23324:SF63	SMART:SM00516	SMART:SM01100	SUPFAM:SSF46938	SUPFAM:SSF52087	UniParc:UPI00023379EF
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:+:54143424..54147364

Molecular Weight (calculated)

52374.0 Da

IEP (calculated)

7.497

GRAVY (calculated)

-0.414

Length

463 amino acids

Sequence
(BLAST)

001: MAEPGGRDVI IGRGDGEEES CSGFQGLRFD IGGGSSSSGK SRTKSFHPPI ETHWDLNSAA GKKTSSPIKS LLSYPLMKFR KTKSLIMILE GARDPKDKQI
101: VESFRQMLLR EGLLPPKHDD YHTLLRFLRM RDFDMLKSKE MFQNYLKWRK DFRVDVLSKE FNFTEYDEVK KCYPHGYHGV DRYGRPVYIE RIGMVDLNKL
201: GQVTTFERFI KHHVSEQEKT LKVRFPACSL AAKRHIASTT SILDVNGVGI SNFSKPARYL FMEIQKIDSC YYPETLNQLF IINAGSGFRM LWKAVKTFLD
301: VRTVAKIHVL GFNYLSVLLE AIDSSNLPTF LGGNCTCSDY GGCLMSDRGP WKNPEVLEMI QVVNLREEID GKSEDGDVDI EDSSMPKKVD MQNKDGNSLS
401: LLEEAACAGS DSACSCRLAL QKIDCLEASL GDIKNKIKTL EDVLQDTKMA LIEHAQHEER PKM

Best Arabidopsis Sequence Match ( AT5G47510.4 )
(BLAST)

001: MMQETDRDIH ISDGTMNKEE QSPNNEEMVE AFRNLLLLHG HLPDKHGDHN TLRRFLKMRD FDLEKSKEAF LNYMKWRVDY KVDLISQKFK FEEYGEVKKH
101: YPHGFHKVDK TGRPIYIERL GMTDLNAFLK ATTIERYVNY HIKEQEKTMS LRYPACSIAS DKHVSSTTTI LDVSGVGMSN FSKPARSLFM EIQKIDSNYY
201: PETLHRLFVV NASSGFRMLW LALKTFLDAR TLAKVQVLGP NYLGELLEAI EPSNLPTFLG GNCTCSDHGG CLFSDEGPWN DPGIKEKIEE PSTIEDAHSE
301: TMDKVSENAP ANQKESLGEV MITMEKYAAL KTAVKDSQKR IEMLEISLHE TKKVLNGLAE IIEAIQPNQP ITKCKPV

Arabidopsis Description

Sec14p-like phosphatidylinositol transfer family protein [Source:TAIR;Acc:AT5G47510]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.