Factsheet for Solyc08g078680.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_02s0154g00510.t01	Wine grape	cytosol	44.58	55.58
Zm00001d019582_P001	Maize	cytosol	36.46	54.69
KRH28067	Soybean	cytosol	51.04	53.26
AT5G47510.4	Thale cress	cytosol	40.62	51.72
KRH77370	Soybean	cytosol	49.79	51.62
Os07t0456500-01	Rice	cytosol	24.58	49.79
CDX77773	Canola	cytosol	41.88	49.39
Bra024938.1-P	Field mustard	cytosol	41.25	49.25
CDY17730	Canola	cytosol	41.25	49.25
TraesCS2D01G500100.2	Wheat	mitochondrion	38.75	47.57
TraesCS2B01G527900.2	Wheat	mitochondrion	38.96	47.46
GSMUA_AchrUn_...	Banana	mitochondrion	36.46	47.17
HORVU2Hr1G111160.14	Barley	mitochondrion	38.54	46.95
TraesCS2A01G499900.1	Wheat	mitochondrion	38.33	46.82
OQU88968	Sorghum	cytosol	39.17	45.74
Solyc04g080690.1.1	Tomato	cytosol	26.46	44.56
Solyc10g053900.1.1	Tomato	cytosol, plastid	34.17	28.82
Solyc11g040280.1.1	Tomato	cytosol	35.0	28.09
Solyc01g109860.2.1	Tomato	cytosol, nucleus, plastid	33.33	27.87
Solyc09g060090.2.1	Tomato	cytosol	34.17	27.66
Solyc07g066090.2.1	Tomato	nucleus	34.17	26.45
Solyc10g053970.1.1	Tomato	cytosol	34.17	26.32
Solyc01g109870.2.1	Tomato	cytosol	33.12	25.44
Solyc10g005740.1.1	Tomato	nucleus	32.29	25.08
Solyc11g012790.1.1	Tomato	cytosol	15.62	22.19
Solyc07g065700.2.1	Tomato	cytosol	7.92	20.65

Protein Annotations

EnsemblPlants:Solyc08g078680.2.1	EnsemblPlantsGene:Solyc08g078680.2	Gene3D:1.10.8.20	Gene3D:3.40.525.10	InterPro:CRAL-TRIO_dom	InterPro:CRAL-TRIO_dom_sf
InterPro:CRAL/TRIO_N_dom	InterPro:CRAL/TRIO_N_dom_sf	InterPro:IPR001251	InterPro:IPR036865	ncoils:Coil	PANTHER:PTHR23324
PANTHER:PTHR23324:SF63	PFAM:PF00650	PFscan:PS50191	SEG:seg	SMART:SM00516	SMART:SM01100
SUPFAM:SSF46938	SUPFAM:SSF52087	UniParc:UPI000276ACE3	UniProt:K4CNM7	MapMan:35.1	:

Description

Phosphatidylinositol/phosphatidylcholine transfer protein SFH11 [Source:Projected from Arabidopsis thaliana (AT5G47510) UniProtKB/Swiss-Prot;Acc:F4JYJ3]

Coordinates

chr8:+:62459928..62463228

Molecular Weight (calculated)

54938.3 Da

IEP (calculated)

8.517

GRAVY (calculated)

-0.362

Length

480 amino acids

Sequence
(BLAST)

001: MRTSKGTFKE ILISAGIKGS SHKEGESTKQ KSKILHPPIE TFWQLPPKKD QKKKSIKSRT AKTIMSLALK KKSKSLQVIL GGSHDPKDEQ IVDSFRQLVF
101: LEGQLIDKNN DYHTLLRFLR MRDYDLQKAK NMYLNFLKWR EEFHVDEISK YFLIENLPYV RQLFDSLSIM MLQEFMFEEF NEVKQCYPHG FHGVDRYGRP
201: IYIERIGMVN LTRLLEVTTI ERFVKYHVSE QEKTLNWRFP SCSLAAKKHI ASTVSIVDVK DVGISNFSKP ARLLFLEIQK IDSHYYPETL HRLFIINAGS
301: GFRVLWKAIK AFLDQRTLAK IQVLGSNYTK TLLEVIDPSN LPTFLGGNCK CSEYGGCLFS DKGPWNDPSV TTLLQAMLEV EEENIDDEEQ NCSASKDSFD
401: GLTPDNVSIK DVYDVTPSRD DTFGQPVLQK ILTLQSAVND TKSKIQALEA ALTDMTSVIE GLGQPIEELK KQILVSKLRA

Best Arabidopsis Sequence Match ( AT5G47510.1 )
(BLAST)

001: MQETDRDIHI SDGTMNKEEQ SPNNEEMVEA FRNLLLLHGH LPDKHGDHNT LRRFLKMRDF DLEKSKEAFL NYMKWRVDYK VDLISQKFKF EEYGEVKKHY
101: PHGFHKVDKT GRPIYIERLG MTDLNAFLKA TTIERYVNYH IKEQEKTMSL RYPACSIASD KHVSSTTTIL DVSGVGMSNF SKPARSLFME IQKIDSNYYP
201: ETLHRLFVVN ASSGFRMLWL ALKTFLDART LAKVQVLGPN YLGELLEAIE PSNLPTFLGG NCTCSDHGGC LFSDEGPWND PGIKEKIEEP STIEDAHSET
301: MDKVSENAPA NQKESLGEVM ITMEKYAALK TAVKDSQKRI EMLEISLHET KKVLNGLAEI IEAIQPNQPI TKCKPV

Arabidopsis Description

Sec14p-like phosphatidylinositol transfer family protein [Source:TAIR;Acc:AT5G47510]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.