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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 4
  • mitochondrion 1
  • plastid 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400045517 Potato cytosol 98.48 98.48
VIT_07s0005g06640.t01 Wine grape endoplasmic reticulum 61.05 59.25
KRG99773 Soybean cytosol, nucleus, plastid 57.67 57.58
KRH46724 Soybean cytosol, nucleus, plastid 57.0 56.9
AT3G24840.3 Thale cress cytosol 52.28 53.45
CDY52084 Canola cytosol 52.28 52.81
Solyc04g080690.1.1 Tomato cytosol 24.62 51.23
GSMUA_Achr9P01730_001 Banana plastid 29.51 50.72
CDX77382 Canola cytosol 51.94 49.76
Bra015089.1-P Field mustard cytosol 41.82 46.36
Solyc10g053970.1.1 Tomato cytosol 44.35 42.22
Solyc07g066090.2.1 Tomato nucleus 43.84 41.94
Solyc10g053900.1.1 Tomato cytosol, plastid 39.8 41.48
Solyc01g109870.2.1 Tomato cytosol 43.68 41.44
Solyc10g005740.1.1 Tomato nucleus 43.0 41.26
Solyc01g109860.2.1 Tomato cytosol, nucleus, plastid 39.29 40.59
GSMUA_Achr6P06610_001 Banana mitochondrion 29.34 40.0
Solyc11g040280.1.1 Tomato cytosol 39.46 39.13
Solyc08g078680.2.1 Tomato cytosol 27.66 34.17
Solyc07g065700.2.1 Tomato cytosol 8.09 26.09
Solyc11g012790.1.1 Tomato cytosol 13.66 23.96
Protein Annotations
EnsemblPlants:Solyc09g060090.2.1EnsemblPlantsGene:Solyc09g060090.2Gene3D:1.10.8.20Gene3D:3.40.525.10InterPro:CRAL-TRIO_domInterPro:CRAL-TRIO_dom_sf
InterPro:CRAL/TRIO_N_domInterPro:CRAL/TRIO_N_dom_sfInterPro:IPR001251InterPro:IPR036865PANTHER:PTHR23324PANTHER:PTHR23324:SF100
PFAM:PF00650PFAM:PF03765PFscan:PS50191PRINTS:PR00180SMART:SM00516SMART:SM01100
SUPFAM:SSF46938SUPFAM:SSF52087UniParc:UPI000276B94FUniProt:K4CTU2MapMan:35.1:
Description
Phosphatidylinositol/phosphatidylcholine transfer protein SFH9 [Source:Projected from Arabidopsis thaliana (AT3G24840) UniProtKB/Swiss-Prot;Acc:F4J7S8]
Coordinates
chr9:-:57567756..57575663
Molecular Weight (calculated)
68256.8 Da
IEP (calculated)
9.170
GRAVY (calculated)
-0.594
Length
593 amino acids
Sequence
(BLAST)
001: MPEIVGIHDH ERTKRYYFEA SEDEKRRTRI RSLKKKAMSA STKLTHSLKR RSKRVAHCRF ASISTEDFRD EKEEEAVNSF RQALIEKDLL PVRHDDYHTM
101: LRFLKARKFD LDKAMLMWSE MLNWRKEQGV DTIIEDFAYE EYEEVQSYYP HGYHGVDRGG RPVYIERLGK IEPTKLMNVT TIERFLKYHI QGFERTFAEK
201: FPACSIAARR HIDSSTTILD VQGLNWRSFG KLAHDLVMRM QKIDGDNYPE TLHQMFIVNA GNGFRFLWNT AKGFLDPKTT AKIHVLGNKF QSNLAEVIDP
301: SQLPDFLGGT CSCPNPDGCL RSDKGPWNDP ELMKLVHALH GEALYPRRIT SYSDSDIEIK PVSPQLLRNE IGSAESDVEV GVSAYSIMQS KQLSDKVPTR
401: RSVSFGSLVQ EDYGPMLTDE HLNSPNRATV SVQRRSPEKS IFSLMINMMV KSLAWICFLF HGVGRLFVKN SDANRSRNGR VSVNASSVEQ NVSSPKKEDL
501: LHPCCQRLQH LENVVADLLK KPTKIPPEKE HMLLDSMDRI KFIEYDLQRT KKALLATASQ QVELAESMES LKENKLKVTN SCWRRGRPSQ YKT
Best Arabidopsis Sequence Match ( AT3G24840.2 )
(BLAST)
001: MPALGEILLV PETDKGKSKD YIEVSEDEKI TRTRSRSLKK KAIKASNKLT HSLRKRGKRV ADQYAPIVIE DVRDEEEEKA VNVFRKALVS LDLLPPRHDD
101: YHTMLRFLKA RRFDLEKTVQ MWEEMLKWRK ENGVDTIIQD FVYDEYEEVQ QYYPHGYHGV DREGRPVYIE RLGKIDPGKL MKVTTLERFL RYHVQGFEKT
201: FSEKFPACSI AAKRHINSST TIIDVHGVSW MSFRKLAQDL VMRMQKIDGD NYPETLNQMY IINAGNGFKL VWNTVKGFLD PKTTSKIHVL GNKYRSHLLE
301: IIDPSELPEF LGGNCKCAHE GGCMRFNKGP WNDPEIMKLV RSRDAMYKPK EMGLLENGEV AKLFSLRHVN TDMSSPDGGH VRERESHPEH DKRAQLSNQA
401: EAVGVGRMEQ SDSTSPLPNN LAVERSLTTS LQKVASFLAR FILQLLGSLC LMFRILGRLV NKQPENQLRP ELSVSVSQQQ VPPPQVHPCW LRLQNLETMV
501: TVLCDKPSSI PQEKEDILRD SLDRIKSIEQ DLQKTKKALF LTASKQIELA ECFENLKESS STGMRSCWPR HCRNFQAET
Arabidopsis Description
Sec14p-like phosphatidylinositol transfer family protein [Source:UniProtKB/TrEMBL;Acc:A0A178VMA9]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.