Factsheet for Solyc01g109870.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400001942	Potato	cytosol	96.48	96.48
Solyc10g053970.1.1	Tomato	cytosol	81.92	82.18
GSMUA_Achr3P28830_001	Banana	nucleus	33.44	78.87
VIT_03s0038g04470.t01	Wine grape	cytosol	78.08	78.08
KRH29416	Soybean	cytosol	77.12	76.63
KRH24438	Soybean	cytosol	76.48	75.99
KRH60804	Soybean	cytosol	74.24	74.36
Bra030295.1-P	Field mustard	cytosol	33.6	74.2
CDY15888	Canola	cytosol	33.6	74.2
CDX99587	Canola	cytosol, mitochondrion	33.12	73.14
AT4G39170.1	Thale cress	cytosol, nucleus, plastid	71.68	72.96
GSMUA_Achr1P12050_001	Banana	cytosol	72.32	72.2
CDX82040	Canola	cytosol	69.44	71.97
CDY12125	Canola	cytosol	70.56	71.59
CDY13810	Canola	cytosol	72.32	71.52
CDX90316	Canola	cytosol	70.24	71.04
AT2G21520.3	Thale cress	cytosol	72.32	70.96
Bra010700.1-P	Field mustard	cytosol	70.08	70.87
KRH51499	Soybean	cytosol	72.32	70.51
GSMUA_Achr2P09690_001	Banana	cytosol	70.56	70.45
Bra031196.1-P	Field mustard	cytosol	70.88	70.09
GSMUA_Achr9P22020_001	Banana	cytosol	69.12	68.46
KXG29407	Sorghum	cytosol, nucleus, plastid	66.72	66.61
TraesCS6B01G125600.1	Wheat	cytosol, nucleus, plastid	65.12	64.6
TraesCS6A01G097100.2	Wheat	cytosol, nucleus, plastid	65.12	64.6
GSMUA_Achr10P...	Banana	cytosol	57.6	64.52
Os02t0133100-01	Rice	cytosol	43.36	64.07
Zm00001d015174_P005	Maize	cytosol	66.56	63.61
Zm00001d053994_P008	Maize	cytosol, mitochondrion	66.56	62.46
Os05t0545000-01	Rice	cytosol, nucleus, plastid	59.36	60.52
TraesCS6D01G085300.6	Wheat	cytosol, nucleus, plastid	62.4	59.91
Zm00001d009439_P004	Maize	cytosol	58.56	59.22
Solyc04g080690.1.1	Tomato	cytosol	26.88	58.95
KXG22454	Sorghum	cytosol	58.24	58.8
Zm00001d038880_P001	Maize	cytosol	58.08	58.74
TraesCS1B01G384500.1	Wheat	cytosol, nucleus, plastid	57.92	58.29
GSMUA_Achr3P28840_001	Banana	mitochondrion	34.08	57.88
Solyc01g109860.2.1	Tomato	cytosol, nucleus, plastid	51.36	55.92
Solyc10g053900.1.1	Tomato	cytosol, plastid	49.76	54.66
HORVU6Hr1G017570.5	Barley	cytosol, nucleus, plastid	65.12	54.63
KXG33199	Sorghum	cytosol	52.64	54.38
TraesCS3D01G255900.4	Wheat	cytosol	52.0	52.85
GSMUA_Achr1P25320_001	Banana	cytosol	54.72	52.29
Zm00001d011663_P003	Maize	cytosol	51.36	52.28
Solyc11g040280.1.1	Tomato	cytosol	49.76	52.01
TraesCS3A01G255000.6	Wheat	cytosol	52.48	51.41
TraesCS3B01G287000.6	Wheat	cytosol	52.48	51.41
TraesCS1D01G372200.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole	57.6	50.42
TraesCS1A01G366700.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole	57.12	50.14
HORVU3Hr1G065830.17	Barley	cytosol, mitochondrion, plastid	53.28	49.78
Zm00001d043733_P002	Maize	mitochondrion	43.68	49.73
HORVU1Hr1G078880.9	Barley	cytosol, nucleus	57.44	49.25
Os01t0701900-01	Rice	nucleus	51.04	47.54
Solyc09g060090.2.1	Tomato	cytosol	41.44	43.68
Solyc07g066090.2.1	Tomato	nucleus	42.56	42.9
Solyc10g005740.1.1	Tomato	nucleus	39.84	40.29
Solyc08g078680.2.1	Tomato	cytosol	25.44	33.12
Solyc07g065700.2.1	Tomato	cytosol	8.16	27.72
Solyc11g012790.1.1	Tomato	cytosol	14.08	26.04

Protein Annotations

Gene3D:1.10.8.20	Gene3D:3.40.525.10	MapMan:35.1	InterPro:CRAL-TRIO_dom	InterPro:CRAL-TRIO_dom_sf	InterPro:CRAL/TRIO_N_dom
InterPro:CRAL/TRIO_N_dom_sf	ncoils:Coil	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	InterPro:IPR001251
InterPro:IPR036865	UniProt:K4B3K0	PFAM:PF00650	PFAM:PF03765	PRINTS:PR00180	PFscan:PS50191
PANTHER:PTHR23324	PANTHER:PTHR23324:SF145	SMART:SM00516	SMART:SM01100	SUPFAM:SSF46938	SUPFAM:SSF52087
EnsemblPlantsGene:Solyc01g109870.2	EnsemblPlants:Solyc01g109870.2.1	TMHMM:TMhelix	UniParc:UPI0002768BAD	SEG:seg	:

Description

No Description!

Coordinates

chr1:-:96702646..96708085

Molecular Weight (calculated)

71285.6 Da

IEP (calculated)

8.612

GRAVY (calculated)

-0.553

Length

625 amino acids

Sequence
(BLAST)

001: MSGPLDRFAR PCFEGSSTHD ERRERKSDFE NSEDERRTRI GSLKKKALNA STKFKHSLKK KSSRRKSNGR LSSLSIEDIR DAEELQAVDQ FRQSLLLDEL
101: LPERHDDYYM MLRFLKARKF DIERAKHMWA DMLQWRKDFG ADTITEDFEF PELEEVVKYY PQGYHGIDKE GRPVYIERLG KVDPNKLMQV TTMDRYIKYH
201: VREFEQCFSI KFPACTIAAK RQIDCSTTIL DVQGVGLKNF SKSARELILR LQKIDGDNYP ETLNQMFIIN AGAGFRLLWN TVKSFLDPKT ASKIHVLGNK
301: YQNKLLEIID ASELPDFIGG SCTCADRGGC MRSDKGPWQN PDILKMIGEA RRAKQLVKVL NSEGKIVYAK PRYPTVKGSS DTSTAESGSE AEDIASPKAL
401: RSYSHLRLTP VREEAKTIGM PGYTSNFPGY DEYVPMVDKA VDSAWKKEPS LHRPSTPKVM LPPASSEKPV EGLHARVLGL LMAFFMTVLM LFRSVTCRVT
501: KKLQDVSTVE NQDIQDFTFD ASPKEEFRPP SPTPAFTEAQ LLSVVLKRLG ELEDKVNTLQ EKPSEMPYEK AELLNAAVCR VDALEAELIA TKKALHEALM
601: RQEELLAYID SQEAAKFQKK KKFCF

Best Arabidopsis Sequence Match ( AT2G21520.1 )
(BLAST)

001: MSGPLDRFAR PCFEGFLSSD EKKERKSDFE NSEDERRTRI GSLKKKAINA STKFKHSLKK KSGRRKSDGR VSSVSIEDVR DVEELQAVDA FRQSLLMDEL
101: LPDRHDDYHM MLRFLKARKF DVEKAKQMWA DMIQWRKEFG TDTIIQDFDF EEINEVLKHY PQCYHGVDKE GRPIYIERLG KVDPNRLMQV TSMDRYVRYH
201: VKEFERSFMI KFPSCTISAK RHIDSSTTIL DVQGVGLKNF NKSARDLITR LQKIDGDNYP ETLHQMFIIN AGPGFRLLWN TVKSFLDPKT SAKIHVLGYK
301: YLSKLLEVID VNELPEFLGG ACTCADQGGC MLSDKGPWKN PEIVKMVLHG GAHRARQVVK VLNSEGKVIA YAKPSYTWIK GSDTSTAESG SDAEDIGSPK
401: AIKSFSHLRL TPVREEAKIA GETSLAGSFP GYDEYVPMVD KAVDATWKVK PAIQRVASRG ALMSPTVPKD HEGIKARVLV MFMAFLMAVF TFFRTVTKKL
501: PATTTSSPAE TQGNAIELGS NGEGVKEECR PPSPVPDLTE TDLLNCVTKK LTELEGKIGT LQSKPNEMPY EKEELLNAAV CRVDALEAEL IATKKALYEA
601: LMRQEELLAY IDRQEEAQFQ KMKKKKKKHL FCF

Arabidopsis Description

Sec14p-like phosphatidylinositol transfer family protein [Source:UniProtKB/TrEMBL;Acc:B3H588]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.