Factsheet for Solyc11g012790.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400034789	Potato	cytosol	94.67	94.67
KRH51210	Soybean	cytosol	68.64	71.38
VIT_10s0116g00400.t01	Wine grape	cytosol	71.01	71.01
KRH36621	Soybean	cytosol	68.64	70.52
KRH01941	Soybean	cytosol	67.46	70.37
KRH11617	Soybean	cytosol	68.34	70.21
CDY40544	Canola	cytosol	64.79	66.36
Bra022153.1-P	Field mustard	cytosol	64.79	66.16
Bra017468.1-P	Field mustard	cytosol	65.09	66.07
CDY41066	Canola	cytosol	64.79	65.77
Solyc07g065700.2.1	Tomato	cytosol	35.8	65.76
CDY25949	Canola	cytosol	64.5	65.47
CDY28908	Canola	cytosol	63.91	65.26
AT5G47730.1	Thale cress	cytosol	65.09	64.52
CDX77792	Canola	cytosol	62.72	63.47
CDY17710	Canola	cytosol	62.43	63.17
Bra024920.1-P	Field mustard	cytosol	62.43	63.17
Solyc04g080690.1.1	Tomato	cytosol	19.23	22.81
Solyc08g078680.2.1	Tomato	cytosol	22.19	15.62
Solyc11g040280.1.1	Tomato	cytosol	25.44	14.38
Solyc01g109860.2.1	Tomato	cytosol, nucleus, plastid	23.96	14.11
Solyc01g109870.2.1	Tomato	cytosol	26.04	14.08
Solyc10g053900.1.1	Tomato	cytosol, plastid	23.67	14.06
Solyc10g005740.1.1	Tomato	nucleus	25.15	13.75
Solyc09g060090.2.1	Tomato	cytosol	23.96	13.66
Solyc10g053970.1.1	Tomato	cytosol	25.15	13.64
Solyc07g066090.2.1	Tomato	nucleus	24.85	13.55

Protein Annotations

EnsemblPlants:Solyc11g012790.1.1	EnsemblPlantsGene:Solyc11g012790.1	Gene3D:3.40.525.10	InterPro:CRAL-TRIO_dom	InterPro:CRAL-TRIO_dom_sf	InterPro:CRAL/TRIO_N_dom
InterPro:CRAL/TRIO_N_dom_sf	InterPro:IPR001251	InterPro:IPR036865	PANTHER:PTHR23324	PANTHER:PTHR23324:SF140	PFAM:PF00650
PFscan:PS50191	SEG:seg	SMART:SM00516	SMART:SM01100	SUPFAM:SSF46938	SUPFAM:SSF52087
UniParc:UPI000276A10D	UniProt:K4D683	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chr11:-:5558186..5562111

Molecular Weight (calculated)

38353.9 Da

IEP (calculated)

8.114

GRAVY (calculated)

-0.335

Length

338 amino acids

Sequence
(BLAST)

001: MCVISEESIA QFEALMEQVD ESLKTTFQNV HQGCTRDTYL RFLIAREGNV ANAHKMLVDS LNWRVKNEID DILSKPIIPT ELYRSIRDSQ LIGMPGYTKE
101: GLPVFAFGAG LSTYDKASVH YYVQSHIQFN EYRDRVILPA ASKKYGKRIS KSLKVLDMTG LKLSALNQIK LLTIISSIDD LNYPEKVVAY YIVNAPYIFS
201: ACWKVVKPLL QERTRKKVQV LSGCGQDDLL KIMDYSSLPH FCRREGSGSS KYSGSSSENC YSLDHPFHQQ LYDYIKQQAL LRRPVRPVKQ GSVHVDFPDA
301: VTEGTEFVQT LASEFQKFGK QNGLSQSLDD LNINDHQA

Best Arabidopsis Sequence Match ( AT1G55840.1 )
(BLAST)

001: MSITNEEAVK QLRALMEDVD DSLRESYRNI HQGYPTENLL RFLKARDGNV QKAHKMLLEC LEWRTQNEID KILTKPIVPV DLYRGIRDTQ LVGVSGYSKE
101: GLPVIAIGVG LSTYDKASVH YYVQSHIQMN EYRDRVVLPS ASKKQGRPIC TCLKILDMSG LKLSALSQIK LMTAITTIDD LNYPEKTETY YVVNVPYIFS
201: ACWKTIKPLL QERTKKKIQV LKGCGKDELL KIMDYESLPH FCRREGSGSG RHISNGTVDN CFSLDHSFHQ DLYDYVKQQA LVKGSGAPIR HGSVHVKFPE
301: PDTEGNKIFD TLENEFQKLG NDQKI

Arabidopsis Description

At1g55840/F14J16_2 [Source:UniProtKB/TrEMBL;Acc:Q8W580]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.