Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY28908 | Canola | cytosol | 96.67 | 96.37 |
| CDY41066 | Canola | cytosol | 90.91 | 90.09 |
| CDY25949 | Canola | cytosol | 90.3 | 89.49 |
| CDX77792 | Canola | cytosol | 89.09 | 88.02 |
| CDY17710 | Canola | cytosol | 88.79 | 87.72 |
| AT5G47730.1 | Thale cress | cytosol | 90.61 | 87.68 |
| KRH51210 | Soybean | cytosol | 73.94 | 75.08 |
| KRH01941 | Soybean | cytosol | 72.73 | 74.07 |
| KRH11617 | Soybean | cytosol | 73.64 | 73.86 |
| KRH36621 | Soybean | cytosol | 73.03 | 73.25 |
| VIT_10s0116g00400.t01 | Wine grape | cytosol | 73.64 | 71.89 |
| GSMUA_Achr7P06060_001 | Banana | cytosol | 69.39 | 68.77 |
| GSMUA_Achr3P12050_001 | Banana | cytosol | 68.48 | 67.66 |
| GSMUA_Achr3P28070_001 | Banana | cytosol | 66.67 | 65.48 |
| Os02t0200000-01 | Rice | cytosol | 64.55 | 65.14 |
| EER90026 | Sorghum | cytosol | 64.85 | 64.85 |
| PGSC0003DMT400034789 | Potato | cytosol | 66.36 | 64.79 |
| Solyc11g012790.1.1 | Tomato | cytosol | 66.36 | 64.79 |
| GSMUA_Achr1P19200_001 | Banana | cytosol | 66.06 | 64.69 |
| CDY52903 | Canola | cytosol | 63.64 | 64.22 |
| TraesCS6A01G164200.1 | Wheat | cytosol | 63.64 | 64.22 |
| TraesCS6B01G188100.1 | Wheat | cytosol | 63.64 | 64.22 |
| TraesCS6D01G149100.1 | Wheat | cytosol | 63.64 | 64.22 |
| CDY10527 | Canola | cytosol | 63.03 | 64.0 |
| CDY42389 | Canola | cytosol | 63.03 | 64.0 |
| CDY53762 | Canola | cytosol | 63.33 | 63.91 |
| TraesCS7A01G378400.1 | Wheat | cytosol | 62.73 | 63.69 |
| GSMUA_Achr4P13090_001 | Banana | cytosol | 64.55 | 63.39 |
| TraesCS7B01G280200.2 | Wheat | cytosol | 62.42 | 63.38 |
| TraesCS7D01G375200.1 | Wheat | cytosol | 62.12 | 63.08 |
| Zm00001d015785_P001 | Maize | extracellular | 62.42 | 63.0 |
| EES04709 | Sorghum | cytosol | 62.12 | 62.69 |
| GSMUA_Achr1P09480_001 | Banana | cytosol | 62.73 | 61.79 |
| HORVU6Hr1G032510.1 | Barley | cytosol, nucleus, peroxisome | 63.33 | 60.76 |
| HORVU7Hr1G090330.11 | Barley | cytosol, nucleus, plastid | 62.12 | 60.29 |
| Zm00001d046538_P003 | Maize | cytosol | 65.45 | 54.96 |
| Zm00001d053648_P005 | Maize | cytosol, endoplasmic reticulum, plastid | 53.33 | 51.01 |
| Os06t0607200-01 | Rice | cytosol | 21.21 | 48.28 |
| CDX99587 | Canola | cytosol, mitochondrion | 20.3 | 23.67 |
| CDY15888 | Canola | cytosol | 20.0 | 23.32 |
| CDY17730 | Canola | cytosol | 23.33 | 19.15 |
| CDY11954 | Canola | cytosol | 11.21 | 18.97 |
| CDX77773 | Canola | cytosol | 23.33 | 18.92 |
| CDY11957 | Canola | cytosol | 21.21 | 15.73 |
| CDX89709 | Canola | cytosol, mitochondrion | 21.52 | 15.6 |
| CDY15887 | Canola | cytosol | 25.76 | 15.48 |
| CDX90317 | Canola | cytosol | 25.15 | 15.46 |
| CDX99586 | Canola | cytosol | 25.76 | 15.45 |
| CDY12126 | Canola | cytosol | 24.85 | 15.33 |
| CDX75444 | Canola | cytosol | 23.94 | 14.79 |
| CDX69071 | Canola | cytosol | 23.94 | 14.79 |
| CDY52084 | Canola | cytosol | 25.76 | 14.48 |
| CDX82040 | Canola | cytosol | 26.06 | 14.26 |
| CDY45318 | Canola | cytosol, plastid | 21.21 | 14.0 |
| CDY12125 | Canola | cytosol | 26.06 | 13.96 |
| CDY13810 | Canola | cytosol | 26.67 | 13.92 |
| CDX90316 | Canola | cytosol | 26.06 | 13.92 |
| CDX77382 | Canola | cytosol | 26.06 | 13.89 |
| CDY17469 | Canola | cytosol | 23.64 | 13.66 |
| CDY10540 | Canola | cytosol, nucleus, plastid | 26.36 | 13.53 |
| CDY42378 | Canola | nucleus | 26.06 | 13.37 |
| CDY39363 | Canola | cytosol | 23.94 | 13.34 |
| CDX85889 | Canola | cytosol | 24.55 | 13.34 |
| CDX76291 | Canola | cytosol | 23.64 | 13.18 |
| CDX68133 | Canola | cytosol | 23.94 | 12.99 |
| CDY29415 | Canola | nucleus | 23.94 | 12.85 |
| CDY50018 | Canola | vacuole | 24.55 | 12.68 |
| CDY36780 | Canola | plastid | 21.52 | 12.46 |
| CDY17397 | Canola | cytosol | 22.42 | 12.44 |
| CDY51966 | Canola | cytosol | 21.82 | 12.1 |
| CDX69225 | Canola | mitochondrion | 22.12 | 12.03 |
| CDY51073 | Canola | mitochondrion, nucleus | 16.06 | 10.37 |
| CDY02262 | Canola | cytosol, plastid | 23.94 | 5.48 |
| CDY36781 | Canola | extracellular | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDY40544 | EnsemblPlantsGene:GSBRNA2T00069865001 | Gene3D:3.40.525.10 | InterPro:CRAL-TRIO_dom | InterPro:CRAL-TRIO_dom_sf | InterPro:CRAL/TRIO_N_dom |
| InterPro:CRAL/TRIO_N_dom_sf | InterPro:IPR001251 | InterPro:IPR036865 | PANTHER:PTHR23324 | PANTHER:PTHR23324:SF140 | PFAM:PF00650 |
| PFAM:PF03765 | PFscan:PS50191 | ProteinID:CDY40544 | ProteinID:CDY40544.1 | SMART:SM00516 | SMART:SM01100 |
| SUPFAM:SSF46938 | SUPFAM:SSF52087 | UniParc:UPI0004EE570C | UniProt:A0A078HTD9 | MapMan:35.1 | : |
Description
BnaC02g33480DBnaC02g33480D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HTD9]
Coordinates
chrLK032474:+:7597..10118
Molecular Weight (calculated)
37611.0 Da
IEP (calculated)
7.424
GRAVY (calculated)
-0.395
Length
330 amino acids
Sequence
(BLAST)
(BLAST)
001: MGVVSEEAID EFLELIDQVE EPLKKTFESV HQGYRREHLS RFLKARDWNV SKAHTMLVEC LRWRVNNEID SILSKPIVPS ELYRGVRDSQ LIGMSGYTRE
101: GLPVFAIGVG LSTFDKASVH YYVQSHIQIN EYRDRVLLPS MSKKNGRPIT TCVKVLDMTG LKLSALSQIK LVTIISTIDD LNYPEKTNTY YVVNAPYIFS
201: ACWKVVKPLL QERTRKKVHV LSGCGRDELL KIMDITSLPH FCRRGSSGSS HHTEGVDCFS FDHPFHQQLY NYVKHHYETH GQAEPAKQGS FHVGFPEPEA
301: EIAKTIESEL HKFENCNGLC QPADDRKASP
101: GLPVFAIGVG LSTFDKASVH YYVQSHIQIN EYRDRVLLPS MSKKNGRPIT TCVKVLDMTG LKLSALSQIK LVTIISTIDD LNYPEKTNTY YVVNAPYIFS
201: ACWKVVKPLL QERTRKKVHV LSGCGRDELL KIMDITSLPH FCRRGSSGSS HHTEGVDCFS FDHPFHQQLY NYVKHHYETH GQAEPAKQGS FHVGFPEPEA
301: EIAKTIESEL HKFENCNGLC QPADDRKASP
001: MGIVSEEAID EFQELMDQVE EPLKKTYERV HQGYLRENLG RFLKARDWNV CKAHTMLVEC LRWRVDNEID SILSKPIVPT ELYRDVRDSQ LIGMSGYTKE
101: GLPVFAIGVG LSTFDKASVH YYVQSHIQIN EYRDRVLLPS ISKKNGRPIT TCVKVLDMTG LKLSALSQIK LVTIISTIDD LNYPEKTNTY YVVNAPYIFS
201: ACWKVVKPLL QERTRKKVHV LSGCGRDELL KIMDFTSLPH FCRSGSSGSS HHTQSANCFS INHPFHQQLY NYVKHHYETQ GQAEPAKQGS FHVGFPEPEA
301: ERCVIAKTIE SELHKFENRN GLAVSIDDRK SSHETLANGD L
101: GLPVFAIGVG LSTFDKASVH YYVQSHIQIN EYRDRVLLPS ISKKNGRPIT TCVKVLDMTG LKLSALSQIK LVTIISTIDD LNYPEKTNTY YVVNAPYIFS
201: ACWKVVKPLL QERTRKKVHV LSGCGRDELL KIMDFTSLPH FCRSGSSGSS HHTQSANCFS INHPFHQQLY NYVKHHYETQ GQAEPAKQGS FHVGFPEPEA
301: ERCVIAKTIE SELHKFENRN GLAVSIDDRK SSHETLANGD L
Arabidopsis Description
At5g47730 [Source:UniProtKB/TrEMBL;Acc:Q9FIK6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.