Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6D01G149100.1 | Wheat | cytosol | 100.0 | 100.0 |
| TraesCS6B01G188100.1 | Wheat | cytosol | 100.0 | 100.0 |
| HORVU6Hr1G032510.1 | Barley | cytosol, nucleus, peroxisome | 97.25 | 92.44 |
| Os02t0200000-01 | Rice | cytosol | 88.38 | 88.38 |
| Zm00001d015785_P001 | Maize | extracellular | 83.49 | 83.49 |
| EES04709 | Sorghum | cytosol | 83.49 | 83.49 |
| TraesCS7A01G378400.1 | Wheat | cytosol | 75.84 | 76.31 |
| Zm00001d053648_P005 | Maize | cytosol, endoplasmic reticulum, plastid | 71.25 | 67.54 |
| Solyc07g065700.2.1 | Tomato | cytosol | 37.92 | 67.39 |
| VIT_19s0015g00760.t01 | Wine grape | cytosol | 68.2 | 65.98 |
| PGSC0003DMT400057025 | Potato | cytosol | 67.58 | 65.58 |
| KRG82898 | Soybean | cytosol | 37.0 | 64.36 |
| CDY40544 | Canola | cytosol | 64.22 | 63.64 |
| TraesCS5A01G170000.1 | Wheat | cytosol | 64.83 | 63.28 |
| CDY28908 | Canola | cytosol | 63.61 | 62.84 |
| Bra022153.1-P | Field mustard | cytosol | 63.61 | 62.84 |
| KRH46406 | Soybean | cytosol | 49.54 | 62.55 |
| Bra017468.1-P | Field mustard | cytosol | 63.61 | 62.46 |
| KRH46410 | Soybean | cytosol | 64.53 | 62.43 |
| CDX77792 | Canola | cytosol | 63.61 | 62.28 |
| CDY41066 | Canola | cytosol | 63.3 | 62.16 |
| Bra024920.1-P | Field mustard | cytosol | 63.3 | 61.98 |
| CDY17710 | Canola | cytosol | 63.3 | 61.98 |
| CDY25949 | Canola | cytosol | 63.0 | 61.86 |
| AT5G47730.1 | Thale cress | cytosol | 63.61 | 61.0 |
| KRH14208 | Soybean | cytosol | 59.02 | 59.94 |
| GSMUA_Achr1P09480_001 | Banana | cytosol | 60.86 | 59.4 |
| KRH73923 | Soybean | cytosol | 36.09 | 56.19 |
| KRH46400 | Soybean | cytosol | 44.34 | 53.9 |
| KRH65859 | Soybean | cytosol | 23.55 | 53.85 |
| KRG98457 | Soybean | cytosol | 62.69 | 50.0 |
| KRH75081 | Soybean | extracellular, mitochondrion | 18.04 | 47.97 |
| KRG82897 | Soybean | cytosol | 15.29 | 45.87 |
| TraesCS2A01G499900.1 | Wheat | mitochondrion | 20.8 | 17.3 |
| TraesCS6A01G097100.2 | Wheat | cytosol, nucleus, plastid | 26.91 | 13.97 |
| TraesCS2A01G327200.2 | Wheat | nucleus | 24.16 | 13.37 |
| TraesCS6A01G284800.1 | Wheat | cytosol | 25.08 | 13.23 |
| TraesCS3A01G255000.6 | Wheat | cytosol | 24.46 | 12.54 |
| TraesCS6A01G097200.1 | Wheat | plastid | 23.24 | 12.4 |
| TraesCS7A01G240000.3 | Wheat | endoplasmic reticulum, plastid | 25.38 | 12.37 |
| TraesCS1A01G366700.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole | 25.08 | 11.52 |
Protein Annotations
| EnsemblPlants:TraesCS6A01G164200.1 | EnsemblPlantsGene:TraesCS6A01G164200 | Gene3D:3.40.525.10 | InterPro:CRAL-TRIO_dom | InterPro:CRAL-TRIO_dom_sf | InterPro:CRAL/TRIO_N_dom |
| InterPro:CRAL/TRIO_N_dom_sf | InterPro:IPR001251 | InterPro:IPR036865 | PANTHER:PTHR23324 | PANTHER:PTHR23324:SF90 | PFAM:PF00650 |
| PFAM:PF03765 | PFscan:PS50191 | SEG:seg | SMART:SM00516 | SMART:SM01100 | SUPFAM:SSF46938 |
| SUPFAM:SSF52087 | TIGR:cd00170 | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chr6A:-:162089254..162099787
Molecular Weight (calculated)
37091.6 Da
IEP (calculated)
7.964
GRAVY (calculated)
-0.416
Length
327 amino acids
Sequence
(BLAST)
(BLAST)
001: MGAAAEDAVR QLGILMDQVD APLRRTFQNV HQGHPRETML RFLKAREWNV SKAHKMLVDS LNWRIENEID SVLERPILPV DLYRSIRDSQ LVGLSGYTKE
101: GLPVFGIGVG QSTYDKASVH YYVQSHIQIN EYRDRIILPM LTEKFGRPIT TCVKVLDMTG LKLSALSQMK MLSSISTVDD LNYPEKSETY YIVNVPYIFS
201: ACWKVVKPLL QERTKKKVKV LSGCGRDELL KIMDYSALPH FCRREGSGSS KHSSSNADDC FSPDHPFHKE LYELTNQQSS HKELLKMGSL HVSIPEPDPN
301: DAKIVEVIQA EFHKMGEQNG STNGHKV
101: GLPVFGIGVG QSTYDKASVH YYVQSHIQIN EYRDRIILPM LTEKFGRPIT TCVKVLDMTG LKLSALSQMK MLSSISTVDD LNYPEKSETY YIVNVPYIFS
201: ACWKVVKPLL QERTKKKVKV LSGCGRDELL KIMDYSALPH FCRREGSGSS KHSSSNADDC FSPDHPFHKE LYELTNQQSS HKELLKMGSL HVSIPEPDPN
301: DAKIVEVIQA EFHKMGEQNG STNGHKV
001: MSITNEEAVK QLRALMEDVD DSLRESYRNI HQGYPTENLL RFLKARDGNV QKAHKMLLEC LEWRTQNEID KILTKPIVPV DLYRGIRDTQ LVGVSGYSKE
101: GLPVIAIGVG LSTYDKASVH YYVQSHIQMN EYRDRVVLPS ASKKQGRPIC TCLKILDMSG LKLSALSQIK LMTAITTIDD LNYPEKTETY YVVNVPYIFS
201: ACWKTIKPLL QERTKKKIQV LKGCGKDELL KIMDYESLPH FCRREGSGSG RHISNGTVDN CFSLDHSFHQ DLYDYVKQQA LVKGSGAPIR HGSVHVKFPE
301: PDTEGNKIFD TLENEFQKLG NDQKI
101: GLPVIAIGVG LSTYDKASVH YYVQSHIQMN EYRDRVVLPS ASKKQGRPIC TCLKILDMSG LKLSALSQIK LMTAITTIDD LNYPEKTETY YVVNVPYIFS
201: ACWKTIKPLL QERTKKKIQV LKGCGKDELL KIMDYESLPH FCRREGSGSG RHISNGTVDN CFSLDHSFHQ DLYDYVKQQA LVKGSGAPIR HGSVHVKFPE
301: PDTEGNKIFD TLENEFQKLG NDQKI
Arabidopsis Description
At1g55840/F14J16_2 [Source:UniProtKB/TrEMBL;Acc:Q8W580]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.