Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr3P12050_001 | Banana | cytosol | 73.67 | 74.55 |
| KRG82898 | Soybean | cytosol | 41.12 | 73.94 |
| GSMUA_Achr1P19200_001 | Banana | cytosol | 73.08 | 73.29 |
| GSMUA_Achr7P06060_001 | Banana | cytosol | 72.19 | 73.27 |
| Solyc07g065700.2.1 | Tomato | cytosol | 39.65 | 72.83 |
| VIT_10s0116g00400.t01 | Wine grape | cytosol | 72.78 | 72.78 |
| KRH46406 | Soybean | cytosol | 55.62 | 72.59 |
| KRH46410 | Soybean | cytosol | 72.19 | 72.19 |
| KRH14208 | Soybean | cytosol | 68.05 | 71.43 |
| PGSC0003DMT400057025 | Potato | cytosol | 70.71 | 70.92 |
| GSMUA_Achr3P28070_001 | Banana | cytosol | 69.82 | 70.24 |
| Os02t0200000-01 | Rice | cytosol | 67.75 | 70.03 |
| EER90026 | Sorghum | cytosol | 67.46 | 69.09 |
| TraesCS6A01G164200.1 | Wheat | cytosol | 65.98 | 68.2 |
| TraesCS6B01G188100.1 | Wheat | cytosol | 65.98 | 68.2 |
| TraesCS6D01G149100.1 | Wheat | cytosol | 65.98 | 68.2 |
| KRH73923 | Soybean | cytosol | 42.01 | 67.62 |
| GSMUA_Achr4P13090_001 | Banana | cytosol | 67.16 | 67.56 |
| Zm00001d015785_P001 | Maize | extracellular | 64.79 | 66.97 |
| EES04709 | Sorghum | cytosol | 64.79 | 66.97 |
| TraesCS7A01G378400.1 | Wheat | cytosol | 63.91 | 66.46 |
| TraesCS7B01G280200.2 | Wheat | cytosol | 63.61 | 66.15 |
| TraesCS7D01G375200.1 | Wheat | cytosol | 63.31 | 65.85 |
| KRH46400 | Soybean | cytosol | 51.48 | 64.68 |
| HORVU6Hr1G032510.1 | Barley | cytosol, nucleus, peroxisome | 65.68 | 64.53 |
| HORVU7Hr1G090330.11 | Barley | cytosol, nucleus, plastid | 63.91 | 63.53 |
| KRH65859 | Soybean | cytosol | 26.33 | 62.24 |
| GSMUA_Achr1P09480_001 | Banana | cytosol | 61.54 | 62.09 |
| KRH75081 | Soybean | extracellular, mitochondrion | 21.89 | 60.16 |
| KRG98457 | Soybean | cytosol | 70.41 | 58.05 |
| Zm00001d046538_P003 | Maize | cytosol | 66.86 | 57.51 |
| KRG82897 | Soybean | cytosol | 17.75 | 55.05 |
| Zm00001d053648_P005 | Maize | cytosol, endoplasmic reticulum, plastid | 55.33 | 54.2 |
| Os06t0607200-01 | Rice | cytosol | 21.89 | 51.03 |
| VIT_02s0154g00510.t01 | Wine grape | cytosol | 17.75 | 15.58 |
| VIT_03s0038g04470.t01 | Wine grape | cytosol | 26.33 | 14.24 |
| VIT_18s0001g12950.t01 | Wine grape | cytosol | 26.04 | 14.13 |
| VIT_03s0038g04480.t01 | Wine grape | cytosol | 24.85 | 13.55 |
| VIT_07s0005g06640.t01 | Wine grape | endoplasmic reticulum | 24.26 | 13.42 |
| VIT_19s0015g01160.t01 | Wine grape | cytosol | 22.78 | 12.4 |
| VIT_04s0023g02400.t01 | Wine grape | cytosol, nucleus, plastid | 19.53 | 12.31 |
Protein Annotations
| EntrezGene:100253176 | wikigene:100253176 | Gene3D:3.40.525.10 | MapMan:35.1 | EMBL:AM477619 | ProteinID:CAN64059 |
| ProteinID:CAN64059.1 | ProteinID:CBI39760 | ProteinID:CBI39760.3 | InterPro:CRAL-TRIO_dom | InterPro:CRAL-TRIO_dom_sf | InterPro:CRAL/TRIO_N_dom |
| InterPro:CRAL/TRIO_N_dom_sf | ncoils:Coil | UniProt:D7UAJ5 | EMBL:FN596747 | InterPro:IPR001251 | InterPro:IPR036865 |
| EntrezGene:LOC100253176 | wikigene:LOC100253176 | PFAM:PF00650 | PFAM:PF03765 | PFscan:PS50191 | PANTHER:PTHR23324 |
| PANTHER:PTHR23324:SF140 | SMART:SM00516 | SMART:SM01100 | SUPFAM:SSF46938 | SUPFAM:SSF52087 | TIGR:TC62733 |
| TIGR:TC68279 | TIGR:TC69246 | UniParc:UPI00019857F4 | ArrayExpress:VIT_19s0015g00760 | EnsemblPlantsGene:VIT_19s0015g00760 | EnsemblPlants:VIT_19s0015g00760.t01 |
| unigene:Vvi.21020 | unigene:Vvi.7904 | RefSeq:XP_002270197 | RefSeq:XP_002270197.1 | SEG:seg | : |
Description
No Description!
Coordinates
chr19:-:8885002..8891598
Molecular Weight (calculated)
38297.9 Da
IEP (calculated)
8.084
GRAVY (calculated)
-0.397
Length
338 amino acids
Sequence
(BLAST)
(BLAST)
001: MGIVNQEAVK QLQLLLDEVE ETLKNSFENV HQGYVRETLA RFLKARDGNV PKAHKMLVDC LNWRIQNEID NILTKPILPP NLYRAVRDSQ LTGLSGYTKE
101: GLPVIAVGVG QSTFDKASVH YYVQSHIQMN EYRDRVVLPA ATKKHGRYIG TCVKVLDMTG LKLSALNQIK LLTVISTIDD LNYPEKTDTY YIVNVPYIFS
201: ACWKVVKPLL QERTRRKVQV LQGCGRDELL KIMDYASLPH FCRREGSGSS HHSENGTTDN CFCLDHVFHQ HVYNYVNQQA ALVESVGPWK QGSFHVAFPE
301: PDPEGKKIAK TIESEFHKIG DHKNGLSNSM SNLKVNDD
101: GLPVIAVGVG QSTFDKASVH YYVQSHIQMN EYRDRVVLPA ATKKHGRYIG TCVKVLDMTG LKLSALNQIK LLTVISTIDD LNYPEKTDTY YIVNVPYIFS
201: ACWKVVKPLL QERTRRKVQV LQGCGRDELL KIMDYASLPH FCRREGSGSS HHSENGTTDN CFCLDHVFHQ HVYNYVNQQA ALVESVGPWK QGSFHVAFPE
301: PDPEGKKIAK TIESEFHKIG DHKNGLSNSM SNLKVNDD
001: MSITNEEAVK QLRALMEDVD DSLRESYRNI HQGYPTENLL RFLKARDGNV QKAHKMLLEC LEWRTQNEID KILTKPIVPV DLYRGIRDTQ LVGVSGYSKE
101: GLPVIAIGVG LSTYDKASVH YYVQSHIQMN EYRDRVVLPS ASKKQGRPIC TCLKILDMSG LKLSALSQIK LMTAITTIDD LNYPEKTETY YVVNVPYIFS
201: ACWKTIKPLL QERTKKKIQV LKGCGKDELL KIMDYESLPH FCRREGSGSG RHISNGTVDN CFSLDHSFHQ DLYDYVKQQA LVKGSGAPIR HGSVHVKFPE
301: PDTEGNKIFD TLENEFQKLG NDQKI
101: GLPVIAIGVG LSTYDKASVH YYVQSHIQMN EYRDRVVLPS ASKKQGRPIC TCLKILDMSG LKLSALSQIK LMTAITTIDD LNYPEKTETY YVVNVPYIFS
201: ACWKTIKPLL QERTKKKIQV LKGCGKDELL KIMDYESLPH FCRREGSGSG RHISNGTVDN CFSLDHSFHQ DLYDYVKQQA LVKGSGAPIR HGSVHVKFPE
301: PDTEGNKIFD TLENEFQKLG NDQKI
Arabidopsis Description
At1g55840/F14J16_2 [Source:UniProtKB/TrEMBL;Acc:Q8W580]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.