Factsheet for VIT_02s0154g00510.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d019582_P001	Maize	cytosol	40.0	48.12
KRH28067	Soybean	cytosol	55.84	46.74
KRH77370	Soybean	cytosol	54.29	45.14
Solyc08g078680.2.1	Tomato	cytosol	55.58	44.58
AT5G47510.4	Thale cress	cytosol	42.6	43.5
Bra024938.1-P	Field mustard	cytosol	43.12	41.29
CDY17730	Canola	cytosol	43.12	41.29
CDX77773	Canola	cytosol	43.12	40.79
TraesCS2D01G500100.2	Wheat	mitochondrion	41.3	40.66
TraesCS2B01G527900.2	Wheat	mitochondrion	41.56	40.61
TraesCS2A01G499900.1	Wheat	mitochondrion	41.3	40.46
OQU88968	Sorghum	cytosol	42.86	40.15
HORVU2Hr1G111160.14	Barley	mitochondrion	41.04	40.1
Os07t0456500-01	Rice	cytosol	24.68	40.08
GSMUA_AchrUn_...	Banana	mitochondrion	37.14	38.54
VIT_03s0038g04470.t01	Wine grape	cytosol	40.78	25.12
VIT_03s0038g04480.t01	Wine grape	cytosol	40.26	25.0
VIT_18s0001g12950.t01	Wine grape	cytosol	40.26	24.88
VIT_19s0015g01160.t01	Wine grape	cytosol	36.36	22.54
VIT_07s0005g06640.t01	Wine grape	endoplasmic reticulum	35.58	22.42
VIT_04s0023g02400.t01	Wine grape	cytosol, nucleus, plastid	28.31	20.34
VIT_10s0116g00400.t01	Wine grape	cytosol	16.62	18.93
VIT_19s0015g00760.t01	Wine grape	cytosol	15.58	17.75

Protein Annotations

ArrayExpress:VIT_02s0154g00510	EMBL:FN596001	EnsemblPlants:VIT_02s0154g00510.t01	EnsemblPlantsGene:VIT_02s0154g00510	Gene3D:3.40.525.10	InterPro:CRAL-TRIO_dom
InterPro:CRAL-TRIO_dom_sf	InterPro:IPR001251	InterPro:IPR036865	ncoils:Coil	PANTHER:PTHR23324	PANTHER:PTHR23324:SF63
PFAM:PF00650	PFscan:PS50191	ProteinID:CCB56519	ProteinID:CCB56519.1	SEG:seg	SMART:SM00516
SUPFAM:SSF52087	UniParc:UPI000210855C	UniProt:F6HPB3	MapMan:35.1	:	:

Description

No Description!

Coordinates

chr2:-:5263175..5271218

Molecular Weight (calculated)

44094.4 Da

IEP (calculated)

6.518

GRAVY (calculated)

-0.557

Length

385 amino acids

Sequence
(BLAST)

001: MYKSKEKVKD IVISRVGEGD PSSGLGEDQF STRRTKLIHP PIETHWNFPS REEYKRSSVS KLSMLAYPLK FRESLKKFKK RKDLKAILEG VHDPKDEQLF
101: EIHLQEFKFE ECPEVKKCYP HGFHGVDRKG RPLYIERTGL VDLNALLQLT TIERFVKYHV SEQEKTLKLR FPACSVAAKR HIASSTSIID VKGVGVSNFS
201: RPARHLFMEI QKIDSNYYPE TLNRLFIVNA GSGFRALWKA IKAFLDARTI AKIEVLGSNY QSNLVEFIDP SNLPSFLCGN CTCSGYGGCL FSDKGPWNDP
301: EIIEMLQAAV ENEDENNDEE DGDEASEEMG KKQIRDFYNA DVEQYSEQNY MDKSVLDNIK ELETALHDTK RVSCANIYSS KFLEI

Best Arabidopsis Sequence Match ( AT5G47510.1 )
(BLAST)

001: MQETDRDIHI SDGTMNKEEQ SPNNEEMVEA FRNLLLLHGH LPDKHGDHNT LRRFLKMRDF DLEKSKEAFL NYMKWRVDYK VDLISQKFKF EEYGEVKKHY
101: PHGFHKVDKT GRPIYIERLG MTDLNAFLKA TTIERYVNYH IKEQEKTMSL RYPACSIASD KHVSSTTTIL DVSGVGMSNF SKPARSLFME IQKIDSNYYP
201: ETLHRLFVVN ASSGFRMLWL ALKTFLDART LAKVQVLGPN YLGELLEAIE PSNLPTFLGG NCTCSDHGGC LFSDEGPWND PGIKEKIEEP STIEDAHSET
301: MDKVSENAPA NQKESLGEVM ITMEKYAALK TAVKDSQKRI EMLEISLHET KKVLNGLAEI IEAIQPNQPI TKCKPV

Arabidopsis Description

Sec14p-like phosphatidylinositol transfer family protein [Source:TAIR;Acc:AT5G47510]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.