CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH77370	Soybean	cytosol	93.26	92.66
VIT_02s0154g00510.t01	Wine grape	cytosol	46.74	55.84
Zm00001d019582_P001	Maize	cytosol	37.61	54.06
Os07t0456500-01	Rice	cytosol	26.52	51.48
AT5G47510.4	Thale cress	cytosol	42.17	51.46
Solyc08g078680.2.1	Tomato	cytosol	53.26	51.04
Bra024938.1-P	Field mustard	cytosol	42.83	49.01
CDY17730	Canola	cytosol	42.83	49.01
GSMUA_AchrUn_...	Banana	mitochondrion	39.35	48.79
CDX77773	Canola	cytosol	43.04	48.65
TraesCS2D01G500100.2	Wheat	mitochondrion	41.09	48.34
TraesCS2B01G527900.2	Wheat	mitochondrion	41.09	47.97
HORVU2Hr1G111160.14	Barley	mitochondrion	40.87	47.72
TraesCS2A01G499900.1	Wheat	mitochondrion	40.65	47.58
OQU88968	Sorghum	cytosol	40.65	45.5
KRH28724	Soybean	plastid	39.13	37.27
KRH76738	Soybean	plastid	38.91	37.21
KRG99756	Soybean	cytosol	30.65	36.62
KRH24439	Soybean	plastid	26.09	36.59
KRH29420	Soybean	cytosol, nucleus, plastid	39.35	32.15
KRH69861	Soybean	plastid	38.7	32.07
KRH08168	Soybean	plastid	38.48	31.89
KRH51809	Soybean	nucleus	40.65	31.59
KRH61132	Soybean	cytosol	40.0	31.08
KRH45371	Soybean	cytosol	29.13	30.45
KRH24438	Soybean	cytosol	41.3	30.21
KRH29416	Soybean	cytosol	41.3	30.21
KRH60804	Soybean	cytosol	40.87	30.13
KRH51503	Soybean	cytosol	37.39	30.02
KRH60806	Soybean	cytosol	36.74	29.55
KRH15161	Soybean	cytosol	40.22	29.37
KRH05860	Soybean	cytosol	39.78	29.28
KRH46724	Soybean	cytosol, nucleus, plastid	37.61	29.12
KRG99773	Soybean	cytosol, nucleus, plastid	37.61	29.12
KRH51499	Soybean	cytosol	40.22	28.86
KRH62508	Soybean	cytosol	36.52	27.1
KRH56402	Soybean	cytosol	36.09	26.77
KRH07662	Soybean	cytosol	34.78	25.85
KRH51210	Soybean	cytosol	17.61	24.92
KRH01941	Soybean	cytosol	17.39	24.69
KRH36621	Soybean	cytosol	16.52	23.1
KRH65859	Soybean	cytosol	7.17	23.08
KRH11617	Soybean	cytosol	16.09	22.49
KRH14208	Soybean	cytosol	15.65	22.36
KRG82898	Soybean	cytosol	9.13	22.34
KRH75081	Soybean	extracellular, mitochondrion	5.87	21.95
KRH46410	Soybean	cytosol	16.09	21.89
KRH46406	Soybean	cytosol	12.17	21.62
KRH73923	Soybean	cytosol	9.57	20.95
KRH46400	Soybean	cytosol	11.52	19.7
KRG98457	Soybean	cytosol	16.3	18.29
KRG82897	Soybean	cytosol	3.48	14.68
KRG99659	Soybean	cytosol, nucleus, plastid	2.17	13.16
KRG99658	Soybean	cytosol, nucleus, plastid	2.17	13.16
KRG99755	Soybean	endoplasmic reticulum	3.48	8.16

Protein Annotations

Gene3D:1.10.8.20	EntrezGene:100807344	Gene3D:3.40.525.10	MapMan:35.1	EMBL:ACUP02006740	InterPro:CRAL-TRIO_dom
InterPro:CRAL-TRIO_dom_sf	InterPro:CRAL/TRIO_N_dom	InterPro:CRAL/TRIO_N_dom_sf	ncoils:Coil	EnsemblPlantsGene:GLYMA_11G032100	GO:GO:0003674
GO:GO:0005215	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006810	GO:GO:0008150
InterPro:IPR001251	InterPro:IPR036865	UniProt:K7LMS7	EnsemblPlants:KRH28067	ProteinID:KRH28067	ProteinID:KRH28067.1
PFAM:PF00650	PRINTS:PR00180	PFscan:PS50191	PANTHER:PTHR23324	PANTHER:PTHR23324:SF63	SMART:SM00516
SMART:SM01100	SUPFAM:SSF46938	SUPFAM:SSF52087	UniParc:UPI000233CB57	SEG:seg	:

Description

hypothetical protein

Coordinates

chr11:-:2340593..2344324

Molecular Weight (calculated)

52052.8 Da

IEP (calculated)

7.277

GRAVY (calculated)

-0.403

Length

460 amino acids

Sequence
(BLAST)

001: MAEPGDRDVI IGRGDGEEES CSGFLGLRFD IGGSSKSRTK SFHPPIETHW DLNSAAAAAA GKKASSPIKS LLSYPLMKFR KTKSLIMILE GAHDPKDKQI
101: VDSFREMLLR EGLLPPKHND YHTLLRFLRM RDFDMSKSKE MFQNYLKWRK DFRVDVLPKE FNFTEYDEVK KCYPHGYHGV DRYGRPVYIE RIGMVDLNNL
201: GQVTTFERFI KHHVSEQEKT LKVRFPACSL AAKRHIASTT SILDVNGVGM SNFSKPARYL FMEIQKIDSC YYPETLNQLF IINAGSGFRM LWKAVKAFLD
301: VRTMAKIHVL GSNYLSVLLE AIDPSNLPTF LGGNCTCSDY GGCLMSDRGP WKNPEVLEMI QVVNLREEIN GKCEDGDVDI EDSSMPKMVD MQNKDGNIMN
401: LLEEAACPGS DSACSCRLVL QKIDCLEASL GDIKNKIKTL EDALQDTKMA LKQHEERPKT

Best Arabidopsis Sequence Match ( AT5G47510.4 )
(BLAST)

001: MMQETDRDIH ISDGTMNKEE QSPNNEEMVE AFRNLLLLHG HLPDKHGDHN TLRRFLKMRD FDLEKSKEAF LNYMKWRVDY KVDLISQKFK FEEYGEVKKH
101: YPHGFHKVDK TGRPIYIERL GMTDLNAFLK ATTIERYVNY HIKEQEKTMS LRYPACSIAS DKHVSSTTTI LDVSGVGMSN FSKPARSLFM EIQKIDSNYY
201: PETLHRLFVV NASSGFRMLW LALKTFLDAR TLAKVQVLGP NYLGELLEAI EPSNLPTFLG GNCTCSDHGG CLFSDEGPWN DPGIKEKIEE PSTIEDAHSE
301: TMDKVSENAP ANQKESLGEV MITMEKYAAL KTAVKDSQKR IEMLEISLHE TKKVLNGLAE IIEAIQPNQP ITKCKPV

Arabidopsis Description

Sec14p-like phosphatidylinositol transfer family protein [Source:TAIR;Acc:AT5G47510]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.