Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 3
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d019582_P001 | Maize | cytosol | 75.95 | 56.25 |
| TraesCS2D01G500100.2 | Wheat | mitochondrion | 75.11 | 45.52 |
| OQU88968 | Sorghum | cytosol | 78.9 | 45.5 |
| TraesCS2B01G527900.2 | Wheat | mitochondrion | 75.53 | 45.43 |
| TraesCS2A01G499900.1 | Wheat | mitochondrion | 74.26 | 44.78 |
| HORVU2Hr1G111160.14 | Barley | mitochondrion | 73.42 | 44.16 |
| GSMUA_AchrUn_... | Banana | mitochondrion | 54.01 | 34.5 |
| CDX77773 | Canola | cytosol | 50.21 | 29.24 |
| Bra024938.1-P | Field mustard | cytosol | 49.37 | 29.1 |
| CDY17730 | Canola | cytosol | 49.37 | 29.1 |
| AT5G47510.4 | Thale cress | cytosol | 45.99 | 28.91 |
| KRH28067 | Soybean | cytosol | 51.48 | 26.52 |
| KRH77370 | Soybean | cytosol | 51.48 | 26.35 |
| VIT_02s0154g00510.t01 | Wine grape | cytosol | 40.08 | 24.68 |
| Solyc08g078680.2.1 | Tomato | cytosol | 49.79 | 24.58 |
| Os08t0497300-01 | Rice | cytosol, plastid | 45.99 | 18.05 |
| Os09t0481100-01 | Rice | nucleus | 44.3 | 17.18 |
| Os02t0440900-00 | Rice | cytosol | 43.04 | 17.06 |
| Os02t0721800-01 | Rice | cytosol | 43.04 | 16.67 |
| Os10t0122600-01 | Rice | cytosol, nucleus, plastid | 41.77 | 16.56 |
| Os08t0341700-01 | Rice | nucleus | 44.3 | 16.48 |
| Os05t0545000-01 | Rice | cytosol, nucleus, plastid | 41.77 | 16.15 |
| Os01t0701900-01 | Rice | nucleus | 44.3 | 15.65 |
| Os02t0133200-01 | Rice | plasma membrane | 39.66 | 14.87 |
| Os06t0607200-01 | Rice | cytosol | 8.86 | 14.48 |
| Os09t0258000-01 | Rice | cytosol | 18.14 | 12.84 |
| Os02t0200000-01 | Rice | cytosol | 16.46 | 11.93 |
| Os02t0133100-01 | Rice | cytosol | 12.66 | 7.09 |
Protein Annotations
| EnsemblPlants:Os07t0456500-01 | EnsemblPlantsGene:Os07g0456500 | Gene3D:1.10.8.20 | Gene3D:3.40.525.10 | InterPro:CRAL-TRIO_dom | InterPro:CRAL-TRIO_dom_sf |
| InterPro:CRAL/TRIO_N_dom | InterPro:CRAL/TRIO_N_dom_sf | InterPro:IPR001251 | InterPro:IPR036865 | PANTHER:PTHR23324 | PANTHER:PTHR23324:SF63 |
| PFAM:PF00650 | PFscan:PS50191 | ProteinID:BAT01342.1 | SMART:SM01100 | SUPFAM:SSF46938 | SUPFAM:SSF52087 |
| UniParc:UPI000393B5D3 | UniProt:A0A0P0X5P6 | MapMan:35.1 | : | : | : |
Description
Hypothetical conserved gene. (Os07t0456500-01)
Coordinates
chr7:-:15875835..15881340
Molecular Weight (calculated)
27810.7 Da
IEP (calculated)
9.080
GRAVY (calculated)
-0.370
Length
237 amino acids
Sequence
(BLAST)
(BLAST)
001: MSFKSIDRLI RRNSKTKLSR NIVDGIYDQK EEQYVQSLRE LLLANNQLPE KFDDYHVLLR FLKMRGFNIV KAKEMFLNML KWREECAVDA IAKDFKFEEY
101: DAVKRCYPHG FHGVDRFGRP LYIERIGLVD LNKLMQVSST DRYVKYHISE QEKTLSLRYP ACSLVAKKHI GSTTAIFDVK GLGMNNFSKS GRDLFIEIQK
201: IDSNYYPEVC MPCLNFNVLS VSYDIISESF RQYACRS
101: DAVKRCYPHG FHGVDRFGRP LYIERIGLVD LNKLMQVSST DRYVKYHISE QEKTLSLRYP ACSLVAKKHI GSTTAIFDVK GLGMNNFSKS GRDLFIEIQK
201: IDSNYYPEVC MPCLNFNVLS VSYDIISESF RQYACRS
001: MTDTMSAHMD RHNKLDYDGS EDEKKTKLCS LKKKAINASN KFKHSFTKRT RRNSRVMSVS IVDDIDLEEL QAVDAFRQAL ILDELLPSKH DDHHMMLRFL
101: RARKFDLEKA KQMWTDMIHW RKEFGVDTIM EDFDFKEIDE VLKYYPQGYH GVDKDGRPVY IERLGQVDAT KLMQVTTIDR YVKYHVREFE KTFNIKLPAC
201: SIAAKKHIDQ STTILDVQGV GLKSFSKAAR DLLQRIQKID SDNYPETLNR MFIINAGSGF RLLWSTVKSF LDPKTTAKIH VLGNKYQSKL LEIIDSNELP
301: EFLGGNCTCA DKGGCMRSDK GPWNDPDIFK MVQNGEGKCP RKTLSNIEEK TISVDENTTM KSDSFAKNKF DAENTKFIPM IDKTVNASTW PTNLHKSNYP
401: EPEDLYSAVK PSQRRGGEGY LFGGVMSLVM GLMTVVRLTK NMPRKLTEAA IYGGEVDKAE TTMVSNQEYM SMVKRMAELE EKCRSLDNQP AAFSPEKEQI
501: LTAALSRVDE LELQLAQTKK TLEETMATQH VIMAYIDKKK KKKKFFGF
101: RARKFDLEKA KQMWTDMIHW RKEFGVDTIM EDFDFKEIDE VLKYYPQGYH GVDKDGRPVY IERLGQVDAT KLMQVTTIDR YVKYHVREFE KTFNIKLPAC
201: SIAAKKHIDQ STTILDVQGV GLKSFSKAAR DLLQRIQKID SDNYPETLNR MFIINAGSGF RLLWSTVKSF LDPKTTAKIH VLGNKYQSKL LEIIDSNELP
301: EFLGGNCTCA DKGGCMRSDK GPWNDPDIFK MVQNGEGKCP RKTLSNIEEK TISVDENTTM KSDSFAKNKF DAENTKFIPM IDKTVNASTW PTNLHKSNYP
401: EPEDLYSAVK PSQRRGGEGY LFGGVMSLVM GLMTVVRLTK NMPRKLTEAA IYGGEVDKAE TTMVSNQEYM SMVKRMAELE EKCRSLDNQP AAFSPEKEQI
501: LTAALSRVDE LELQLAQTKK TLEETMATQH VIMAYIDKKK KKKKFFGF
Arabidopsis Description
SFH3Phosphatidylinositol/phosphatidylcholine transfer protein SFH3 [Source:UniProtKB/Swiss-Prot;Acc:Q93ZE9]
SUBAcon: [vacuole,nucleus,cytosol]
SUBAcon: [vacuole,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.