Factsheet for Os05t0545000-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G384500.1	Wheat	cytosol, nucleus, plastid	83.85	82.77
KXG22454	Sorghum	cytosol	83.36	82.55
Zm00001d038880_P001	Maize	cytosol	81.89	81.23
Zm00001d009439_P004	Maize	cytosol	81.73	81.07
GSMUA_Achr3P28830_001	Banana	nucleus	32.63	75.47
TraesCS1A01G366700.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole	84.18	72.47
TraesCS1D01G372200.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole	83.69	71.85
HORVU1Hr1G078880.9	Barley	cytosol, nucleus	83.85	70.51
CDY15888	Canola	cytosol	30.51	66.08
Bra030295.1-P	Field mustard	cytosol	30.51	66.08
GSMUA_Achr9P22020_001	Banana	cytosol	67.7	65.77
CDX99587	Canola	cytosol, mitochondrion	30.02	65.02
KRH29416	Soybean	cytosol	61.5	59.94
KRH60804	Soybean	cytosol	61.01	59.94
Os01t0701900-01	Rice	nucleus	65.42	59.76
Solyc01g109870.2.1	Tomato	cytosol	60.52	59.36
VIT_03s0038g04470.t01	Wine grape	cytosol	60.52	59.36
KRH24438	Soybean	cytosol	60.85	59.3
PGSC0003DMT400001942	Potato	cytosol	60.03	58.88
AT4G39170.1	Thale cress	cytosol, nucleus, plastid	58.73	58.63
CDY12125	Canola	cytosol	58.56	58.28
CDX82040	Canola	cytosol	57.26	58.21
Solyc10g053970.1.1	Tomato	cytosol	58.89	57.95
Bra010700.1-P	Field mustard	cytosol	58.4	57.93
CDX90316	Canola	cytosol	58.4	57.93
CDY13810	Canola	cytosol	59.71	57.91
AT2G21520.3	Thale cress	cytosol	60.03	57.77
KRH51499	Soybean	cytosol	59.87	57.25
PGSC0003DMT400043545	Potato	cytosol	59.38	56.61
Os02t0133100-01	Rice	cytosol	38.99	56.5
Bra031196.1-P	Field mustard	cytosol	58.24	56.49
GSMUA_Achr3P28840_001	Banana	mitochondrion	33.77	56.25
GSMUA_Achr1P25320_001	Banana	cytosol	53.51	50.15
Os10t0122600-01	Rice	cytosol, nucleus, plastid	46.82	47.99
Os02t0440900-00	Rice	cytosol	46.82	47.99
Os08t0341700-01	Rice	nucleus	46.98	45.21
Os02t0133200-01	Rice	plasma membrane	45.19	43.83
Os02t0721800-01	Rice	cytosol	43.07	43.14
Os08t0497300-01	Rice	cytosol, plastid	41.27	41.89
Os07t0456500-01	Rice	cytosol	16.15	41.77
Os09t0481100-01	Rice	nucleus	40.13	40.26
Os09t0258000-01	Rice	cytosol	14.52	26.57
Os02t0200000-01	Rice	cytosol	13.7	25.69
Os06t0607200-01	Rice	cytosol	4.57	19.31

Protein Annotations

Gene3D:1.10.8.20	Gene3D:3.40.525.10	MapMan:35.1	EntrezGene:4339494	ProteinID:AAU43984.1	EMBL:AK066240
ProteinID:BAF18123.1	ProteinID:BAS95159.1	InterPro:CRAL-TRIO_dom	InterPro:CRAL-TRIO_dom_sf	InterPro:CRAL/TRIO_N_dom	InterPro:CRAL/TRIO_N_dom_sf
ncoils:Coil	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	InterPro:IPR001251	InterPro:IPR036865
EnsemblPlantsGene:Os05g0545000	EnsemblPlants:Os05t0545000-01	PFAM:PF00650	PFAM:PF03765	PRINTS:PR00180	PFscan:PS50191
PANTHER:PTHR23324	PANTHER:PTHR23324:SF72	UniProt:Q65X38	SMART:SM00516	SMART:SM01100	SUPFAM:SSF46938
SUPFAM:SSF52087	TMHMM:TMhelix	UniParc:UPI000043F497	RefSeq:XP_015640193.1	SEG:seg	:

Description

Sec14-nodulin domain-containing protein 6, Sec14-nodulin domain protein 6Similar to Phosphatidylinositol transfer-like protein IV. (Os05t0545000-01);Similar to Phosphatidylinositol transfer-like protein III. (Os05t0545000-02)

Coordinates

chr5:+:27043471..27048544

Molecular Weight (calculated)

70007.4 Da

IEP (calculated)

8.339

GRAVY (calculated)

-0.621

Length

613 amino acids

Sequence
(BLAST)

001: MSGPLDRFAR PCFEGFTHND EKKEIRSDAD NSEGEKKTKI GSFKKKAINA GNKFRHSLRR RSKKKNEPRG SIEDIRDVQD LQAVDAFRQC LVDEDLLPQQ
101: HDDYHTMLRF LKARKFDVEK AKSMWSDMLK WRKEFGADNI EEFDYTEADE VMKYYPQFYH GVDKEGRPIY IELIGKVDAN KLMQVTTIER YVKYHVKEFE
201: RCFQMRFPAC SIAAKRPIDS STTILDVQGV GLKNFSKAAR DLITRLQKID NDNYPETLRR MYIINAGQGF KMLWSTVKSF LDPKTASKIH VLGSKYQNKL
301: LEIIDENELP EFFGGKCKCE AFGGCKKSDK GPWKDPNIIK RVLNGEANYG RQIVTISSTD GKIIRYAGPQ YPTRKGSDGS AESGSEVEDG ASPMASRNLI
401: TNPLLTPVHE ESKLAAHGFT SASPSIIEES IPVVDKVVDD GWGSPRASSS PSRSLPITFD GLWTQVITWL TVLIVSLFAM VRSVPSRMAK RFSSQSTDHD
501: HSYVEYPQEA EYKEEFRPPS PAPSYTEKDV LSSMVRRLGE LEEKVQALET KPSEMPFEKE ELLNAAVRRV DALEAELIST KKALYEALMR QDELLAYIDK
601: QDMIKFRKKK FCF

Best Arabidopsis Sequence Match ( AT2G21520.1 )
(BLAST)

001: MSGPLDRFAR PCFEGFLSSD EKKERKSDFE NSEDERRTRI GSLKKKAINA STKFKHSLKK KSGRRKSDGR VSSVSIEDVR DVEELQAVDA FRQSLLMDEL
101: LPDRHDDYHM MLRFLKARKF DVEKAKQMWA DMIQWRKEFG TDTIIQDFDF EEINEVLKHY PQCYHGVDKE GRPIYIERLG KVDPNRLMQV TSMDRYVRYH
201: VKEFERSFMI KFPSCTISAK RHIDSSTTIL DVQGVGLKNF NKSARDLITR LQKIDGDNYP ETLHQMFIIN AGPGFRLLWN TVKSFLDPKT SAKIHVLGYK
301: YLSKLLEVID VNELPEFLGG ACTCADQGGC MLSDKGPWKN PEIVKMVLHG GAHRARQVVK VLNSEGKVIA YAKPSYTWIK GSDTSTAESG SDAEDIGSPK
401: AIKSFSHLRL TPVREEAKIA GETSLAGSFP GYDEYVPMVD KAVDATWKVK PAIQRVASRG ALMSPTVPKD HEGIKARVLV MFMAFLMAVF TFFRTVTKKL
501: PATTTSSPAE TQGNAIELGS NGEGVKEECR PPSPVPDLTE TDLLNCVTKK LTELEGKIGT LQSKPNEMPY EKEELLNAAV CRVDALEAEL IATKKALYEA
601: LMRQEELLAY IDRQEEAQFQ KMKKKKKKHL FCF

Arabidopsis Description

Sec14p-like phosphatidylinositol transfer family protein [Source:UniProtKB/TrEMBL;Acc:B3H588]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.