Factsheet for Zm00001d038880_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG22454	Sorghum	cytosol	92.56	92.41
Zm00001d009439_P004	Maize	cytosol	90.13	90.13
Os05t0545000-01	Rice	cytosol, nucleus, plastid	81.23	81.89
TraesCS1B01G384500.1	Wheat	cytosol, nucleus, plastid	78.8	78.42
GSMUA_Achr3P28830_001	Banana	nucleus	30.26	70.57
TraesCS1A01G366700.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole	79.13	68.68
Zm00001d039981_P001	Maize	cytosol	13.59	68.29
TraesCS1D01G372200.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole	78.48	67.93
HORVU1Hr1G078880.9	Barley	cytosol, nucleus	79.45	67.35
CDY15888	Canola	cytosol	30.58	66.78
Bra030295.1-P	Field mustard	cytosol	30.58	66.78
CDX99587	Canola	cytosol, mitochondrion	30.1	65.72
GSMUA_Achr9P22020_001	Banana	cytosol	63.92	62.6
Zm00001d011663_P003	Maize	cytosol	62.14	62.54
Zm00001d031251_P001	Maize	cytosol, mitochondrion	12.95	62.02
Zm00001d043733_P002	Maize	mitochondrion	53.4	60.11
KRH60804	Soybean	cytosol	60.52	59.94
KRH29416	Soybean	cytosol	60.84	59.78
KRH24438	Soybean	cytosol	60.19	59.14
VIT_03s0038g04470.t01	Wine grape	cytosol	59.71	59.04
AT4G39170.1	Thale cress	cytosol, nucleus, plastid	57.93	58.31
Solyc01g109870.2.1	Tomato	cytosol	58.74	58.08
CDY12125	Canola	cytosol	57.77	57.95
PGSC0003DMT400001942	Potato	cytosol	58.41	57.76
CDX82040	Canola	cytosol	56.31	57.71
CDX90316	Canola	cytosol	57.61	57.61
Bra010700.1-P	Field mustard	cytosol	57.61	57.61
CDY13810	Canola	cytosol	58.9	57.59
Solyc10g053970.1.1	Tomato	cytosol	57.77	57.3
GSMUA_Achr3P28840_001	Banana	mitochondrion	33.98	57.07
KRH51499	Soybean	cytosol	58.74	56.63
AT2G21520.3	Thale cress	cytosol	58.25	56.51
Bra031196.1-P	Field mustard	cytosol	57.44	56.17
PGSC0003DMT400043545	Potato	cytosol	58.25	55.99
Zm00001d015174_P005	Maize	cytosol	58.9	55.66
Zm00001d053994_P008	Maize	cytosol, mitochondrion	57.61	53.45
Zm00001d012531_P001	Maize	mitochondrion	11.0	51.91
Zm00001d035770_P002	Maize	cytosol, endoplasmic reticulum	23.79	49.49
GSMUA_Achr1P25320_001	Banana	cytosol	51.94	49.08
Zm00001d008240_P001	Maize	cytosol, extracellular, mitochondrion, nucleus	15.37	47.98
Zm00001d045670_P001	Maize	cytosol	14.56	47.87
Zm00001d016601_P006	Maize	cytosol	45.31	46.28
Zm00001d043774_P001	Maize	cytosol	6.31	45.88
Zm00001d019582_P001	Maize	cytosol	23.3	45.0
Zm00001d045718_P001	Maize	cytosol	17.8	43.48
Zm00001d005995_P003	Maize	nucleus	41.42	42.74
Zm00001d017876_P018	Maize	cytosol	41.91	41.98
Zm00001d051674_P037	Maize	cytosol	41.26	41.67
Zm00001d014589_P001	Maize	cytosol	6.47	41.24
Zm00001d031316_P020	Maize	cytosol	41.26	39.53
Zm00001d015175_P002	Maize	plastid	41.26	39.53
Zm00001d050131_P002	Maize	cytosol	39.0	37.72
Zm00001d037983_P001	Maize	cytosol	14.08	36.86
Zm00001d010393_P001	Maize	plastid	21.2	35.99
Zm00001d052840_P016	Maize	plastid	40.45	34.48
Zm00001d047488_P001	Maize	nucleus	8.58	33.12
Zm00001d015785_P001	Maize	extracellular	13.59	25.69
Zm00001d053333_P001	Maize	cytosol	4.85	24.59
Zm00001d015625_P001	Maize	cytosol	5.02	23.85
Zm00001d024390_P001	Maize	cytosol	4.85	23.44
Zm00001d046538_P003	Maize	cytosol	14.08	22.14
Zm00001d019834_P003	Maize	cytosol, extracellular, plastid	3.4	20.59
Zm00001d053648_P005	Maize	cytosol, endoplasmic reticulum, plastid	11.49	20.58
Zm00001d005118_P002	Maize	cytosol	12.46	19.54
Zm00001d005778_P001	Maize	plastid	8.58	18.86
Zm00001d035370_P003	Maize	plastid	11.97	18.14
Zm00001d050144_P001	Maize	cytosol	4.85	17.34
Zm00001d051318_P001	Maize	cytosol	5.18	16.84
Zm00001d023995_P002	Maize	extracellular, golgi, plastid	6.15	16.1
Zm00001d020031_P001	Maize	cytosol	3.07	12.1

Protein Annotations

Gene3D:1.10.8.20	EntrezGene:100274573	Gene3D:3.40.525.10	MapMan:35.1	UniProt:A0A1D6MBK0	ProteinID:AQK88142.1
ProteinID:AQK88147.1	InterPro:CRAL-TRIO_dom	InterPro:CRAL-TRIO_dom_sf	InterPro:CRAL/TRIO_N_dom	InterPro:CRAL/TRIO_N_dom_sf	ncoils:Coil
GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	InterPro:IPR001251	InterPro:IPR036865	PFAM:PF00650
PFAM:PF03765	PFscan:PS50191	PANTHER:PTHR23324	PANTHER:PTHR23324:SF72	SMART:SM00516	SMART:SM01100
SUPFAM:SSF46938	SUPFAM:SSF52087	TMHMM:TMhelix	UniParc:UPI00018C6A68	EnsemblPlantsGene:Zm00001d038880	EnsemblPlants:Zm00001d038880_P001
EnsemblPlants:Zm00001d038880_T001	SEG:seg	:	:	:	:

Description

Putative CRAL/TRIO domain containing%2C Sec14p-like phosphatidylinositol transfer family protein

Coordinates

chr6:+:166312844..166318245

Molecular Weight (calculated)

70803.3 Da

IEP (calculated)

7.576

GRAVY (calculated)

-0.647

Length

618 amino acids

Sequence
(BLAST)

001: MSGPLDRFAR PCFEGFVHND ERKESRSDAD NSEGDKKTKI GSFKKKAINA GNKFRHSLRR RSKKKTERGD SIKDIRDVKE LQDVETFRQC LIDEDLLPPQ
101: HDDYHMMLRF LKARKFEVEK AKSMWSDMIN WRKEFGVDKI EEFDYTELDE VTEYYPQFYH GVDKEGRPVY IELVGKVDAN KLIQVTTLDR YVKYHVKEFE
201: KCFQMKFPAC TIAAKKHIDS STTILDVQGV GFKNFSKSAR ELITRLQKID SDNYPETLCR MYIINAGQGF KMLWSTIKSF LDPKTASKIH VLGNKYQHKL
301: LEIIDECELP EFLGGKCNCI EGCQRSDKGP WKDPNIIKRV LNDEANYGRQ IVTISSIDGK IIRYARPDHP TRKGSDASAE SGSEVEDVTS PTASRNLITH
401: PILTPVHEES KLSPHGSTFV AHASIEENIP VVDKVVDDGW GTPRGSLQAS SGSLPSRNTH GTFEGLRVQA VAWLTFLITA LFATLCSVPS KMARRISSQS
501: SKHDDYRGEY PQEEEEHKEE FRPPSPAPSY TEKDVLSSML RRLGELEGRV QVLETKPSEM PFEKEELLNA AVRRVDALEA ELISTKKALY DALMRQDELL
601: AYIDRQELIK FRKKKFCF

Best Arabidopsis Sequence Match ( AT2G21520.1 )
(BLAST)

001: MSGPLDRFAR PCFEGFLSSD EKKERKSDFE NSEDERRTRI GSLKKKAINA STKFKHSLKK KSGRRKSDGR VSSVSIEDVR DVEELQAVDA FRQSLLMDEL
101: LPDRHDDYHM MLRFLKARKF DVEKAKQMWA DMIQWRKEFG TDTIIQDFDF EEINEVLKHY PQCYHGVDKE GRPIYIERLG KVDPNRLMQV TSMDRYVRYH
201: VKEFERSFMI KFPSCTISAK RHIDSSTTIL DVQGVGLKNF NKSARDLITR LQKIDGDNYP ETLHQMFIIN AGPGFRLLWN TVKSFLDPKT SAKIHVLGYK
301: YLSKLLEVID VNELPEFLGG ACTCADQGGC MLSDKGPWKN PEIVKMVLHG GAHRARQVVK VLNSEGKVIA YAKPSYTWIK GSDTSTAESG SDAEDIGSPK
401: AIKSFSHLRL TPVREEAKIA GETSLAGSFP GYDEYVPMVD KAVDATWKVK PAIQRVASRG ALMSPTVPKD HEGIKARVLV MFMAFLMAVF TFFRTVTKKL
501: PATTTSSPAE TQGNAIELGS NGEGVKEECR PPSPVPDLTE TDLLNCVTKK LTELEGKIGT LQSKPNEMPY EKEELLNAAV CRVDALEAEL IATKKALYEA
601: LMRQEELLAY IDRQEEAQFQ KMKKKKKKHL FCF

Arabidopsis Description

Sec14p-like phosphatidylinositol transfer family protein [Source:UniProtKB/TrEMBL;Acc:B3H588]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.