CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d038880_P001	Maize	cytosol	92.41	92.56
Zm00001d009439_P004	Maize	cytosol	91.6	91.75
Os05t0545000-01	Rice	cytosol, nucleus, plastid	82.55	83.36
TraesCS1B01G384500.1	Wheat	cytosol, nucleus, plastid	80.13	79.87
GSMUA_Achr3P28830_001	Banana	nucleus	30.69	71.7
TraesCS1A01G366700.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole	80.78	70.22
TraesCS1D01G372200.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole	80.45	69.75
HORVU1Hr1G078880.9	Barley	cytosol, nucleus	80.45	68.31
KXG33199	Sorghum	cytosol	64.46	65.95
Bra030295.1-P	Field mustard	cytosol	29.73	65.02
CDY15888	Canola	cytosol	29.73	65.02
GSMUA_Achr9P22020_001	Banana	cytosol	65.75	64.5
CDX99587	Canola	cytosol, mitochondrion	29.24	63.96
KRH60804	Soybean	cytosol	60.26	59.78
KRH29416	Soybean	cytosol	60.1	59.14
VIT_03s0038g04470.t01	Wine grape	cytosol	59.45	58.88
KRH24438	Soybean	cytosol	59.77	58.82
Solyc01g109870.2.1	Tomato	cytosol	58.8	58.24
AT4G39170.1	Thale cress	cytosol, nucleus, plastid	57.67	58.14
KXG29407	Sorghum	cytosol, nucleus, plastid	58.64	57.99
GSMUA_Achr3P28840_001	Banana	mitochondrion	34.41	57.88
CDY12125	Canola	cytosol	57.35	57.63
PGSC0003DMT400001942	Potato	cytosol	58.16	57.6
Bra010700.1-P	Field mustard	cytosol	57.19	57.28
CDX90316	Canola	cytosol	57.19	57.28
Solyc10g053970.1.1	Tomato	cytosol	57.51	57.14
CDX82040	Canola	cytosol	55.57	57.05
CDY13810	Canola	cytosol	58.16	56.96
KRH51499	Soybean	cytosol	58.64	56.63
AT2G21520.3	Thale cress	cytosol	58.0	56.36
PGSC0003DMT400043545	Potato	cytosol	58.16	55.99
Bra031196.1-P	Field mustard	cytosol	57.03	55.85
GSMUA_Achr1P25320_001	Banana	cytosol	52.67	49.85
OQU85018	Sorghum	nucleus	45.88	46.33
KXG40069	Sorghum	nucleus	45.72	44.92
OQU84321	Sorghum	cytosol	40.55	44.5
EER96946	Sorghum	cytosol, nucleus, plastid	42.49	43.91
KXG30865	Sorghum	cytosol	42.16	42.3
OQU80990	Sorghum	cytosol	41.36	42.17
OQU88968	Sorghum	cytosol	24.56	36.98
EES04709	Sorghum	cytosol	13.41	25.38
EER96447	Sorghum	cytosol	13.57	25.07
EER90026	Sorghum	cytosol	13.09	24.55

Protein Annotations

Gene3D:1.10.8.20	Gene3D:3.40.525.10	MapMan:35.1	UniProt:A0A1B6P9R4	InterPro:CRAL-TRIO_dom	InterPro:CRAL-TRIO_dom_sf
InterPro:CRAL/TRIO_N_dom	InterPro:CRAL/TRIO_N_dom_sf	ncoils:Coil	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021
InterPro:IPR001251	InterPro:IPR036865	EnsemblPlants:KXG22454	ProteinID:KXG22454	ProteinID:KXG22454.1	PFAM:PF00650
PFAM:PF03765	PRINTS:PR00180	PFscan:PS50191	PANTHER:PTHR23324	PANTHER:PTHR23324:SF72	SMART:SM00516
SMART:SM01100	EnsemblPlantsGene:SORBI_3009G217100	SUPFAM:SSF46938	SUPFAM:SSF52087	TMHMM:TMhelix	UniParc:UPI0001C80579
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr9:+:56138696..56144229

Molecular Weight (calculated)

70937.7 Da

IEP (calculated)

8.439

GRAVY (calculated)

-0.603

Length

619 amino acids

Sequence
(BLAST)

001: MSGPLDRFAR PSCAGFEGFV HNDERKESRS DADNSEGDKK TKIGSFKKKA INAGNKFRHS LRRRSKKKER GESIKDIRDV KELQDVETFR QCLIDEDLLP
101: QQHDDYHMML RFLKARKFEV EKAKNMWSDM LKWRKEFGVD KIEEFDYTEL DEVTKYYPQF YHGVDKEGRP VYIELIGKVD ASKLLQVTTL DRYVKYHVKE
201: FERCFQMRFP ACSIAAKKHI DSSTTILDVQ GVGFKNFSKS ARELITRLQK IDSDNYPETL CRMYIINAGQ GFKMLWSTIK SFLDPKTVSK IHVLGNKYQH
301: KLLEIIDECE LPEFFGGKCN CIEGCQRSDK GPWKDPNIIK RVLNGEANYG RQIVTISSTD GKIISYARPG HPTRKGSDAS AESGSEVEDV VSPTASRNLI
401: THPILTPVHE ESKLSAHGSA FVAHASIEES IPVVDKVVDD GWGSPKGSLQ ASSGSLSSRN SHGAFEGLRI QIITWLTFLI MTLFAMLCSV PSKMARRISN
501: QPSRHDDYRV EYPQEQEYKE EFRPPSPAPS YTEKDVLSSM LRRLGELEDK VQVLETKPSE MPFEKEELLN AAVRRVDALE AELISTKKAL YDALMRQDEL
601: LAYIDRQQLI KFRKKKFCF

Best Arabidopsis Sequence Match ( AT2G21520.3 )
(BLAST)

001: MSGPLDRFAR PSFTTGFEGF LSSDEKKERK SDFENSEDER RTRIGSLKKK AINASTKFKH SLKKKSGRRK SDGRVSSVSI EDVRDVEELQ AVDAFRQSLL
101: MDELLPDRHD DYHMMLRFLK ARKFDVEKAK QMWADMIQWR KEFGTDTIIQ DFDFEEINEV LKHYPQCYHG VDKEGRPIYI ERLGKVDPNR LMQVTSMDRY
201: VRYHVKEFER SFMIKFPSCT ISAKRHIDSS TTILDVQGVG LKNFNKSARD LITRLQKIDG DNYPETLHQM FIINAGPGFR LLWNTVKSFL DPKTSAKIHV
301: LGYKYLSKLL EVIDVNELPE FLGGACTCAD QGGCMLSDKG PWKNPEIVKM VLHGGAHRAR QVVKVLNSEG KVIAYAKPSY TWIKGSDTST AESGSDAEDI
401: GSPKAIKSFS HLRLTPVREE AKIAGETSLA GSFPGYDEYV PMVDKAVDAT WKVKPAIQRV ASRGALMSPT VPKDHEGIKA RVLVMFMAFL MAVFTFFRTV
501: TKKLPATTTS SPAETQGNAI ELGSNGEGVK EECRPPSPVP DLTETDLLNC VTKKLTELEG KIGTLQSKPN EMPYEKEELL NAAVCRVDAL EAELIATKKA
601: LYEALMRQEE LLAYIDRQEE AQFQKMKKKK KKHLFCF

Arabidopsis Description

Sec14p-like phosphatidylinositol transfer family protein [Source:UniProtKB/TrEMBL;Acc:B3H588]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.