Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY13810 | Canola | cytosol | 99.0 | 94.46 |
| Bra031196.1-P | Field mustard | cytosol | 96.68 | 92.25 |
| CDY15888 | Canola | cytosol | 43.28 | 92.23 |
| CDX99587 | Canola | cytosol, mitochondrion | 42.95 | 91.52 |
| AT2G21520.3 | Thale cress | cytosol | 90.38 | 85.56 |
| GSMUA_Achr3P28830_001 | Banana | nucleus | 35.66 | 81.13 |
| CDY12125 | Canola | cytosol | 82.42 | 80.68 |
| CDX90316 | Canola | cytosol | 82.09 | 80.1 |
| VIT_03s0038g04470.t01 | Wine grape | cytosol | 76.45 | 73.76 |
| KRH29416 | Soybean | cytosol | 76.45 | 73.29 |
| KRH60804 | Soybean | cytosol | 75.46 | 72.92 |
| KRH24438 | Soybean | cytosol | 75.79 | 72.66 |
| PGSC0003DMT400001942 | Potato | cytosol | 72.14 | 69.6 |
| Solyc01g109870.2.1 | Tomato | cytosol | 71.97 | 69.44 |
| Solyc10g053970.1.1 | Tomato | cytosol | 71.14 | 68.86 |
| KRH51499 | Soybean | cytosol | 72.31 | 68.02 |
| GSMUA_Achr1P12050_001 | Banana | cytosol | 70.32 | 67.73 |
| GSMUA_Achr2P09690_001 | Banana | cytosol | 69.65 | 67.09 |
| PGSC0003DMT400043545 | Potato | cytosol | 70.65 | 66.25 |
| GSMUA_Achr9P22020_001 | Banana | cytosol | 67.0 | 64.03 |
| KXG29407 | Sorghum | cytosol, nucleus, plastid | 64.51 | 62.14 |
| GSMUA_Achr10P... | Banana | cytosol | 56.38 | 60.93 |
| TraesCS6A01G097100.2 | Wheat | cytosol, nucleus, plastid | 63.52 | 60.79 |
| TraesCS6B01G125600.1 | Wheat | cytosol, nucleus, plastid | 63.35 | 60.63 |
| Zm00001d015174_P005 | Maize | cytosol | 64.84 | 59.79 |
| CDY39363 | Canola | cytosol | 57.55 | 58.61 |
| Zm00001d053994_P008 | Maize | cytosol, mitochondrion | 64.68 | 58.56 |
| Os05t0545000-01 | Rice | cytosol, nucleus, plastid | 58.21 | 57.26 |
| CDX68133 | Canola | cytosol | 57.55 | 57.07 |
| CDX85889 | Canola | cytosol | 57.21 | 56.84 |
| Os02t0133100-01 | Rice | cytosol | 39.8 | 56.74 |
| Zm00001d038880_P001 | Maize | cytosol | 57.71 | 56.31 |
| CDY29415 | Canola | nucleus | 57.38 | 56.26 |
| TraesCS6D01G085300.6 | Wheat | cytosol, nucleus, plastid | 60.53 | 56.07 |
| KXG22454 | Sorghum | cytosol | 57.05 | 55.57 |
| Zm00001d009439_P004 | Maize | cytosol | 56.88 | 55.5 |
| TraesCS1B01G384500.1 | Wheat | cytosol, nucleus, plastid | 56.72 | 55.07 |
| CDY15887 | Canola | cytosol | 48.42 | 53.19 |
| CDX75444 | Canola | cytosol | 47.1 | 53.18 |
| CDX99586 | Canola | cytosol | 48.42 | 53.09 |
| CDX69071 | Canola | cytosol | 46.77 | 52.81 |
| KXG33199 | Sorghum | cytosol | 52.4 | 52.23 |
| HORVU6Hr1G017570.5 | Barley | cytosol, nucleus, plastid | 63.35 | 51.28 |
| TraesCS3D01G255900.4 | Wheat | cytosol | 52.24 | 51.22 |
| GSMUA_Achr3P28840_001 | Banana | mitochondrion | 31.18 | 51.09 |
| GSMUA_Achr1P25320_001 | Banana | cytosol | 55.22 | 50.92 |
| CDY12126 | Canola | cytosol | 44.78 | 50.47 |
| CDX90317 | Canola | cytosol | 44.61 | 50.09 |
| CDY17469 | Canola | cytosol | 47.43 | 50.09 |
| CDY45318 | Canola | cytosol, plastid | 41.46 | 50.0 |
| TraesCS3B01G287000.6 | Wheat | cytosol | 52.74 | 49.84 |
| Zm00001d011663_P003 | Maize | cytosol | 50.75 | 49.84 |
| TraesCS3A01G255000.6 | Wheat | cytosol | 52.24 | 49.37 |
| CDX89709 | Canola | cytosol, mitochondrion | 36.65 | 48.57 |
| CDX76291 | Canola | cytosol | 47.43 | 48.31 |
| TraesCS1D01G372200.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole | 56.55 | 47.76 |
| Zm00001d043733_P002 | Maize | mitochondrion | 43.45 | 47.72 |
| TraesCS1A01G366700.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole | 56.22 | 47.61 |
| HORVU3Hr1G065830.17 | Barley | cytosol, mitochondrion, plastid | 51.91 | 46.79 |
| HORVU1Hr1G078880.9 | Barley | cytosol, nucleus | 56.22 | 46.5 |
| Os01t0701900-01 | Rice | nucleus | 50.75 | 45.6 |
| CDY11954 | Canola | cytosol | 14.1 | 43.59 |
| CDY11957 | Canola | cytosol | 31.68 | 42.92 |
| CDX69225 | Canola | mitochondrion | 42.79 | 42.5 |
| CDY52084 | Canola | cytosol | 39.97 | 41.06 |
| CDY42378 | Canola | nucleus | 42.79 | 40.12 |
| CDY10540 | Canola | cytosol, nucleus, plastid | 42.29 | 39.66 |
| CDX77382 | Canola | cytosol | 40.3 | 39.26 |
| CDY17730 | Canola | cytosol | 26.04 | 39.05 |
| CDY50018 | Canola | vacuole | 40.8 | 38.5 |
| CDX77773 | Canola | cytosol | 25.87 | 38.33 |
| CDY51966 | Canola | cytosol | 35.99 | 36.47 |
| CDY17397 | Canola | cytosol | 35.66 | 36.13 |
| CDY51073 | Canola | mitochondrion, nucleus | 30.18 | 35.62 |
| CDY36780 | Canola | plastid | 32.84 | 34.74 |
| CDY53762 | Canola | cytosol | 15.42 | 28.44 |
| CDY52903 | Canola | cytosol | 15.42 | 28.44 |
| CDY42389 | Canola | cytosol | 14.59 | 27.08 |
| CDY10527 | Canola | cytosol | 14.43 | 26.77 |
| CDY40544 | Canola | cytosol | 14.26 | 26.06 |
| CDY28908 | Canola | cytosol | 14.26 | 25.98 |
| CDY41066 | Canola | cytosol | 13.76 | 24.92 |
| CDY25949 | Canola | cytosol | 13.76 | 24.92 |
| CDX77792 | Canola | cytosol | 13.6 | 24.55 |
| CDY17710 | Canola | cytosol | 13.27 | 23.95 |
| CDY02262 | Canola | cytosol, plastid | 43.12 | 18.04 |
| CDY36781 | Canola | extracellular | 0.17 | 0.6 |
Protein Annotations
| Gene3D:1.10.8.20 | Gene3D:3.40.525.10 | MapMan:35.1 | GO:A0A078CZ26 | EnsemblPlants:CDX82040 | ProteinID:CDX82040 |
| ProteinID:CDX82040.1 | InterPro:CRAL-TRIO_dom | InterPro:CRAL-TRIO_dom_sf | InterPro:CRAL/TRIO_N_dom | InterPro:CRAL/TRIO_N_dom_sf | EnsemblPlantsGene:GSBRNA2T00137024001 |
| InterPro:IPR001251 | InterPro:IPR036865 | PFAM:PF00650 | PFAM:PF03765 | PRINTS:PR00180 | PFscan:PS50191 |
| PANTHER:PTHR23324 | PANTHER:PTHR23324:SF145 | SMART:SM00516 | SMART:SM01100 | SUPFAM:SSF46938 | SUPFAM:SSF52087 |
| TMHMM:TMhelix | UniParc:UPI0004EDE328 | SEG:seg | : | : | : |
Description
BnaC08g35610D
Coordinates
chrLK031826:+:2008432..2011915
Molecular Weight (calculated)
68259.5 Da
IEP (calculated)
8.843
GRAVY (calculated)
-0.419
Length
603 amino acids
Sequence
(BLAST)
(BLAST)
001: MSGPLDRFAR PCFEGFLSSD EKKERKSDFE NSEDERRTRI GSLKKKAINA STKFKHSLKK KSGRRKSDGR VSSVSIEDVR DVEELQAVDA FRHALLIDEL
101: LPSKHDDYHM MLRFLKARKF DIEKAKHMWS DMIQWRKEFG TDTILQDFDF EEINEVLKYY PHGYHGVDKE GRPIYIERLG KVDPNKLMQV TSMDRYVRYH
201: VKEFERSFMI KFPSCTIAAK KHIDSNTTIL DVQGVGLKNF TKSARELITR LQKIDGDNYP ETLHQMFIVN AGAGFRLLWN TVKGFIDPKT SSKIHVLGYK
301: YQTKLLEVID ANELPEFLGG ACTCADQGGC MLSDKGPWKN PEIVKMVLHG GAHRAKQVVK VLNSEGKVIA YAKPSYPWIK GSDTSTAESG SDADDIGSPK
401: AIMSFSHLRL TPVREEAKIA GETSLAGGLL GYDEYVPMVD KAVDATWKVK PAIQRVASKG TLMSPTAPKD TEGILARVLV MIITYVMAVF TFFRAVPFLV
501: IKKLPASQPQ TEGNATELLG EKLTELEGKI GTLQTKPNEM PYEKEELLNA AVCRVDALEA ELIATKKALY EALMRQEELL AYIDRQEEAQ FQKMNKKKHL
601: FCF
101: LPSKHDDYHM MLRFLKARKF DIEKAKHMWS DMIQWRKEFG TDTILQDFDF EEINEVLKYY PHGYHGVDKE GRPIYIERLG KVDPNKLMQV TSMDRYVRYH
201: VKEFERSFMI KFPSCTIAAK KHIDSNTTIL DVQGVGLKNF TKSARELITR LQKIDGDNYP ETLHQMFIVN AGAGFRLLWN TVKGFIDPKT SSKIHVLGYK
301: YQTKLLEVID ANELPEFLGG ACTCADQGGC MLSDKGPWKN PEIVKMVLHG GAHRAKQVVK VLNSEGKVIA YAKPSYPWIK GSDTSTAESG SDADDIGSPK
401: AIMSFSHLRL TPVREEAKIA GETSLAGGLL GYDEYVPMVD KAVDATWKVK PAIQRVASKG TLMSPTAPKD TEGILARVLV MIITYVMAVF TFFRAVPFLV
501: IKKLPASQPQ TEGNATELLG EKLTELEGKI GTLQTKPNEM PYEKEELLNA AVCRVDALEA ELIATKKALY EALMRQEELL AYIDRQEEAQ FQKMNKKKHL
601: FCF
001: MSGPLDRFAR PCFEGFLSSD EKKERKSDFE NSEDERRTRI GSLKKKAINA STKFKHSLKK KSGRRKSDGR VSSVSIEDVR DVEELQAVDA FRQSLLMDEL
101: LPDRHDDYHM MLRFLKARKF DVEKAKQMWA DMIQWRKEFG TDTIIQDFDF EEINEVLKHY PQCYHGVDKE GRPIYIERLG KVDPNRLMQV TSMDRYVRYH
201: VKEFERSFMI KFPSCTISAK RHIDSSTTIL DVQGVGLKNF NKSARDLITR LQKIDGDNYP ETLHQMFIIN AGPGFRLLWN TVKSFLDPKT SAKIHVLGYK
301: YLSKLLEVID VNELPEFLGG ACTCADQGGC MLSDKGPWKN PEIVKMVLHG GAHRARQVVK VLNSEGKVIA YAKPSYTWIK GSDTSTAESG SDAEDIGSPK
401: AIKSFSHLRL TPVREEAKIA GETSLAGSFP GYDEYVPMVD KAVDATWKVK PAIQRVASRG ALMSPTVPKD HEGIKARVLV MFMAFLMAVF TFFRTVTKKL
501: PATTTSSPAE TQGNAIELGS NGEGVKEECR PPSPVPDLTE TDLLNCVTKK LTELEGKIGT LQSKPNEMPY EKEELLNAAV CRVDALEAEL IATKKALYEA
601: LMRQEELLAY IDRQEEAQFQ KMKKKKKKHL FCF
101: LPDRHDDYHM MLRFLKARKF DVEKAKQMWA DMIQWRKEFG TDTIIQDFDF EEINEVLKHY PQCYHGVDKE GRPIYIERLG KVDPNRLMQV TSMDRYVRYH
201: VKEFERSFMI KFPSCTISAK RHIDSSTTIL DVQGVGLKNF NKSARDLITR LQKIDGDNYP ETLHQMFIIN AGPGFRLLWN TVKSFLDPKT SAKIHVLGYK
301: YLSKLLEVID VNELPEFLGG ACTCADQGGC MLSDKGPWKN PEIVKMVLHG GAHRARQVVK VLNSEGKVIA YAKPSYTWIK GSDTSTAESG SDAEDIGSPK
401: AIKSFSHLRL TPVREEAKIA GETSLAGSFP GYDEYVPMVD KAVDATWKVK PAIQRVASRG ALMSPTVPKD HEGIKARVLV MFMAFLMAVF TFFRTVTKKL
501: PATTTSSPAE TQGNAIELGS NGEGVKEECR PPSPVPDLTE TDLLNCVTKK LTELEGKIGT LQSKPNEMPY EKEELLNAAV CRVDALEAEL IATKKALYEA
601: LMRQEELLAY IDRQEEAQFQ KMKKKKKKHL FCF
Arabidopsis Description
Sec14p-like phosphatidylinositol transfer family protein [Source:UniProtKB/TrEMBL;Acc:B3H588]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.