Factsheet for GSMUA_Achr10P20690_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra030295.1-P	Field mustard	cytosol	37.81	74.56
CDY15888	Canola	cytosol	37.63	74.2
CDX99587	Canola	cytosol, mitochondrion	37.28	73.5
GSMUA_Achr1P12050_001	Banana	cytosol	75.27	67.09
GSMUA_Achr2P09690_001	Banana	cytosol	74.37	66.29
Os02t0133100-01	Rice	cytosol	49.46	65.25
KXG29407	Sorghum	cytosol, nucleus, plastid	67.2	59.9
VIT_03s0038g04470.t01	Wine grape	cytosol	66.49	59.36
GSMUA_Achr3P28830_001	Banana	nucleus	27.96	58.87
TraesCS6B01G125600.1	Wheat	cytosol, nucleus, plastid	65.95	58.41
KRH29416	Soybean	cytosol	65.77	58.35
TraesCS6A01G097100.2	Wheat	cytosol, nucleus, plastid	65.77	58.25
KRH60804	Soybean	cytosol	65.05	58.17
KRH24438	Soybean	cytosol	65.41	58.03
GSMUA_Achr9P22020_001	Banana	cytosol	65.59	58.0
Zm00001d015174_P005	Maize	cytosol	67.56	57.65
Solyc01g109870.2.1	Tomato	cytosol	64.52	57.6
AT4G39170.1	Thale cress	cytosol, nucleus, plastid	63.26	57.49
PGSC0003DMT400001942	Potato	cytosol	64.34	57.44
GSMUA_Achr3P28840_001	Banana	mitochondrion	37.63	57.07
CDX90316	Canola	cytosol	62.54	56.47
CDX82040	Canola	cytosol	60.93	56.38
Bra010700.1-P	Field mustard	cytosol	62.37	56.31
Solyc10g053970.1.1	Tomato	cytosol	62.72	56.18
CDY12125	Canola	cytosol	62.01	56.17
KRH51499	Soybean	cytosol	64.52	56.16
Zm00001d053994_P008	Maize	cytosol, mitochondrion	66.31	55.56
CDY13810	Canola	cytosol	62.72	55.38
Bra031196.1-P	Field mustard	cytosol	62.72	55.38
AT2G21520.3	Thale cress	cytosol	63.08	55.26
PGSC0003DMT400043545	Potato	cytosol	62.9	54.59
TraesCS6D01G085300.6	Wheat	cytosol, nucleus, plastid	62.72	53.76
GSMUA_Achr9P01730_001	Banana	plastid	30.82	49.86
GSMUA_Achr6P03210_001	Banana	cytosol	53.05	49.83
GSMUA_Achr1P25320_001	Banana	cytosol	58.24	49.69
HORVU6Hr1G017570.5	Barley	cytosol, nucleus, plastid	65.77	49.26
GSMUA_Achr4P09770_001	Banana	cytosol	38.89	47.59
GSMUA_Achr5P23630_001	Banana	cytosol	51.08	47.34
GSMUA_Achr7P06190_001	Banana	cytosol	45.88	44.37
GSMUA_Achr2P14280_001	Banana	cytosol, nucleus, plastid	52.33	44.24
GSMUA_Achr3P11960_001	Banana	cytosol, plastid	47.31	43.28
GSMUA_Achr3P04130_001	Banana	nucleus	47.31	42.38
GSMUA_Achr5P04200_001	Banana	plastid	46.59	41.6
GSMUA_Achr8P24430_001	Banana	endoplasmic reticulum	48.03	40.61
GSMUA_AchrUn_...	Banana	mitochondrion	26.7	40.16
GSMUA_Achr6P06610_001	Banana	mitochondrion	29.21	37.47
GSMUA_Achr3P12050_001	Banana	cytosol	16.13	26.95
GSMUA_Achr7P06060_001	Banana	cytosol	15.95	26.73
GSMUA_Achr4P13090_001	Banana	cytosol	15.95	26.49
GSMUA_Achr1P19200_001	Banana	cytosol	15.95	26.41
GSMUA_Achr3P28070_001	Banana	cytosol	15.59	25.89
GSMUA_Achr1P09480_001	Banana	cytosol	13.62	22.69

Protein Annotations

Gene3D:1.10.8.20	Gene3D:3.40.525.10	MapMan:35.1	InterPro:CRAL-TRIO_dom	InterPro:CRAL-TRIO_dom_sf	InterPro:CRAL/TRIO_N_dom
InterPro:CRAL/TRIO_N_dom_sf	ncoils:Coil	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	EnsemblPlantsGene:GSMUA_Achr10G20690_001
EnsemblPlants:GSMUA_Achr10P20690_001	EnsemblPlants:GSMUA_Achr10T20690_001	InterPro:IPR001251	InterPro:IPR036865	UniProt:M0RJZ4	PFAM:PF00650
PFAM:PF03765	PRINTS:PR00180	PFscan:PS50191	PANTHER:PTHR23324	PANTHER:PTHR23324:SF145	SMART:SM00516
SMART:SM01100	SUPFAM:SSF46938	SUPFAM:SSF52087	TMHMM:TMhelix	UniParc:UPI000296DA88	:

Description

Putative Sec14 cytosolic factor [Source:GMGC_GENE;Acc:GSMUA_Achr10G20690_001]

Coordinates

chr10:-:26555473..26563007

Molecular Weight (calculated)

63460.9 Da

IEP (calculated)

5.542

GRAVY (calculated)

-0.348

Length

558 amino acids

Sequence
(BLAST)

001: MFISDFFNDI RDIEELQDVD AFRQSLILEE LLPAKHDDYH MMLRFLKARK FDIEKAKHMW AEMLQWRKEY GTDTILDDFE FSELNEVLQY YPHGYHGVDK
101: DGRPVYIERL GKVDPNKLMQ VTTMDRYIRY HVREFERSFL IKFPACSIAA KKHIDSSTTI LDVQGVSLKN FSKTARELIQ RLQKIDNDNY PETLFRMFII
201: NAGPGFRLLW NTVKSFLDPK TTSKIYVLGS KYQSKLLEVI ELSELPEFLG GSCICSDLGG CLKSEKGSWM DPNILKMVLG GEAQCARQVV TVSNGEGKVI
301: AHAKPQYTAI KSSDTSTAES GSEAEDGASP KAARSYLSYP HLTPVHEEVK IVKADRFSAG FPQCDEHIPM VDKTVDAGWN REVYNQSLDA LNDAGEYSTL
401: ETRNSSSGIR AQTIAVLITF FMTLAALICS LTSHVKRRIQ EKTSGTSQND SSVSVEPLLQ EEFHPPPAPG FTESDFSCLL KRLSDLEEKV NALQSRPSEM
501: PLEKEELLNA AVHRVDALEV ELIVTKKALH EVLMKQEELL AYIDRQEEAK FRMKMFCI

Best Arabidopsis Sequence Match ( AT2G21520.3 )
(BLAST)

001: MSGPLDRFAR PSFTTGFEGF LSSDEKKERK SDFENSEDER RTRIGSLKKK AINASTKFKH SLKKKSGRRK SDGRVSSVSI EDVRDVEELQ AVDAFRQSLL
101: MDELLPDRHD DYHMMLRFLK ARKFDVEKAK QMWADMIQWR KEFGTDTIIQ DFDFEEINEV LKHYPQCYHG VDKEGRPIYI ERLGKVDPNR LMQVTSMDRY
201: VRYHVKEFER SFMIKFPSCT ISAKRHIDSS TTILDVQGVG LKNFNKSARD LITRLQKIDG DNYPETLHQM FIINAGPGFR LLWNTVKSFL DPKTSAKIHV
301: LGYKYLSKLL EVIDVNELPE FLGGACTCAD QGGCMLSDKG PWKNPEIVKM VLHGGAHRAR QVVKVLNSEG KVIAYAKPSY TWIKGSDTST AESGSDAEDI
401: GSPKAIKSFS HLRLTPVREE AKIAGETSLA GSFPGYDEYV PMVDKAVDAT WKVKPAIQRV ASRGALMSPT VPKDHEGIKA RVLVMFMAFL MAVFTFFRTV
501: TKKLPATTTS SPAETQGNAI ELGSNGEGVK EECRPPSPVP DLTETDLLNC VTKKLTELEG KIGTLQSKPN EMPYEKEELL NAAVCRVDAL EAELIATKKA
601: LYEALMRQEE LLAYIDRQEE AQFQKMKKKK KKHLFCF

Arabidopsis Description

Sec14p-like phosphatidylinositol transfer family protein [Source:UniProtKB/TrEMBL;Acc:B3H588]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.