Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr3P12050_001 | Banana | cytosol | 84.38 | 84.13 |
| GSMUA_Achr1P19200_001 | Banana | cytosol | 84.08 | 83.09 |
| GSMUA_Achr3P28070_001 | Banana | cytosol | 76.58 | 75.89 |
| GSMUA_Achr4P13090_001 | Banana | cytosol | 72.97 | 72.32 |
| VIT_19s0015g00760.t01 | Wine grape | cytosol | 73.27 | 72.19 |
| KRH46406 | Soybean | cytosol | 55.26 | 71.04 |
| KRG82898 | Soybean | cytosol | 39.94 | 70.74 |
| KRH46410 | Soybean | cytosol | 71.17 | 70.12 |
| CDY40544 | Canola | cytosol | 68.77 | 69.39 |
| Bra022153.1-P | Field mustard | cytosol | 68.47 | 68.88 |
| CDY28908 | Canola | cytosol | 68.47 | 68.88 |
| Bra017468.1-P | Field mustard | cytosol | 68.47 | 68.47 |
| CDX77792 | Canola | cytosol | 68.47 | 68.26 |
| CDY25949 | Canola | cytosol | 68.17 | 68.17 |
| Solyc07g065700.2.1 | Tomato | cytosol | 37.54 | 67.93 |
| CDY41066 | Canola | cytosol | 67.87 | 67.87 |
| Bra024920.1-P | Field mustard | cytosol | 67.87 | 67.66 |
| CDY17710 | Canola | cytosol | 67.87 | 67.66 |
| GSMUA_Achr1P09480_001 | Banana | cytosol | 67.87 | 67.46 |
| KRH14208 | Soybean | cytosol | 64.56 | 66.77 |
| PGSC0003DMT400057025 | Potato | cytosol | 67.57 | 66.77 |
| AT5G47730.1 | Thale cress | cytosol | 67.57 | 65.98 |
| KRH73923 | Soybean | cytosol | 40.24 | 63.81 |
| KRH65859 | Soybean | cytosol | 26.73 | 62.24 |
| KRH46400 | Soybean | cytosol | 50.15 | 62.08 |
| KRG98457 | Soybean | cytosol | 70.87 | 57.56 |
| KRH75081 | Soybean | extracellular, mitochondrion | 21.02 | 56.91 |
| KRG82897 | Soybean | cytosol | 18.02 | 55.05 |
| GSMUA_Achr9P01730_001 | Banana | plastid | 22.82 | 22.03 |
| GSMUA_Achr3P28830_001 | Banana | nucleus | 15.92 | 20.0 |
| GSMUA_AchrUn_... | Banana | mitochondrion | 20.42 | 18.33 |
| GSMUA_Achr6P06610_001 | Banana | mitochondrion | 23.72 | 18.16 |
| GSMUA_Achr4P09770_001 | Banana | cytosol | 24.62 | 17.98 |
| GSMUA_Achr7P06190_001 | Banana | cytosol | 27.93 | 16.12 |
| GSMUA_Achr10P... | Banana | cytosol | 26.73 | 15.95 |
| GSMUA_Achr6P03210_001 | Banana | cytosol | 27.93 | 15.66 |
| GSMUA_Achr3P11960_001 | Banana | cytosol, plastid | 28.23 | 15.41 |
| GSMUA_Achr1P12050_001 | Banana | cytosol | 28.83 | 15.34 |
| GSMUA_Achr5P23630_001 | Banana | cytosol | 26.73 | 14.78 |
| GSMUA_Achr5P04200_001 | Banana | plastid | 27.33 | 14.56 |
| GSMUA_Achr2P09690_001 | Banana | cytosol | 27.33 | 14.54 |
| GSMUA_Achr3P04130_001 | Banana | nucleus | 27.03 | 14.45 |
| GSMUA_Achr9P22020_001 | Banana | cytosol | 27.03 | 14.26 |
| GSMUA_Achr2P14280_001 | Banana | cytosol, nucleus, plastid | 27.33 | 13.79 |
| GSMUA_Achr8P24430_001 | Banana | endoplasmic reticulum | 26.73 | 13.48 |
| GSMUA_Achr1P25320_001 | Banana | cytosol | 25.83 | 13.15 |
| GSMUA_Achr3P28840_001 | Banana | mitochondrion | 11.71 | 10.6 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr7P06060_001 | EnsemblPlants:GSMUA_Achr7T06060_001 | EnsemblPlantsGene:GSMUA_Achr7G06060_001 | Gene3D:3.40.525.10 | InterPro:CRAL-TRIO_dom | InterPro:CRAL-TRIO_dom_sf |
| InterPro:CRAL/TRIO_N_dom | InterPro:CRAL/TRIO_N_dom_sf | InterPro:IPR001251 | InterPro:IPR036865 | PANTHER:PTHR23324 | PANTHER:PTHR23324:SF140 |
| PFAM:PF00650 | PFAM:PF03765 | PFscan:PS50191 | SEG:seg | SMART:SM00516 | SMART:SM01100 |
| SUPFAM:SSF46938 | SUPFAM:SSF52087 | UniParc:UPI0002950092 | UniProt:M0TF46 | MapMan:35.1 | : |
Description
CRAL/TRIO domain containing protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr7G06060_001]
Coordinates
chr7:-:4479525..4484780
Molecular Weight (calculated)
37588.3 Da
IEP (calculated)
8.925
GRAVY (calculated)
-0.337
Length
333 amino acids
Sequence
(BLAST)
(BLAST)
001: MGIASQDAVK QLSALIGQVD EPSKITFQNI HQGYPTETLV RFLKAREWNI SKAQNMLVDC LNWRKQNHID DILAKPIIPA DLYRGIRDSQ LIGMPGYTKD
101: GHPVFAIGVG LSTYDKASVN YYVQSHIQLN EYRDRVILPA ATKKYGRHVG TCVKVLDMSG LKLSALSQIK LLTIISTIDD LNYPEKTETY YIVNVPYVFS
201: ACWKVVKPLL QERTRRKVQV LQGCGRDELL KIMDYASLPH FCKREGSGSS RHSSSGSDDC FSFDHPFHQQ LYSYIKQRAP SREFIAPLKQ GSFHVDVPEP
301: NPEGIKIAKT IESEMHKLED CNGLGRSLTG LKI
101: GHPVFAIGVG LSTYDKASVN YYVQSHIQLN EYRDRVILPA ATKKYGRHVG TCVKVLDMSG LKLSALSQIK LLTIISTIDD LNYPEKTETY YIVNVPYVFS
201: ACWKVVKPLL QERTRRKVQV LQGCGRDELL KIMDYASLPH FCKREGSGSS RHSSSGSDDC FSFDHPFHQQ LYSYIKQRAP SREFIAPLKQ GSFHVDVPEP
301: NPEGIKIAKT IESEMHKLED CNGLGRSLTG LKI
001: MSITNEEAVK QLRALMEDVD DSLRESYRNI HQGYPTENLL RFLKARDGNV QKAHKMLLEC LEWRTQNEID KILTKPIVPV DLYRGIRDTQ LVGVSGYSKE
101: GLPVIAIGVG LSTYDKASVH YYVQSHIQMN EYRDRVVLPS ASKKQGRPIC TCLKILDMSG LKLSALSQIK LMTAITTIDD LNYPEKTETY YVVNVPYIFS
201: ACWKTIKPLL QERTKKKIQV LKGCGKDELL KIMDYESLPH FCRREGSGSG RHISNGTVDN CFSLDHSFHQ DLYDYVKQQA LVKGSGAPIR HGSVHVKFPE
301: PDTEGNKIFD TLENEFQKLG NDQKI
101: GLPVIAIGVG LSTYDKASVH YYVQSHIQMN EYRDRVVLPS ASKKQGRPIC TCLKILDMSG LKLSALSQIK LMTAITTIDD LNYPEKTETY YVVNVPYIFS
201: ACWKTIKPLL QERTKKKIQV LKGCGKDELL KIMDYESLPH FCRREGSGSG RHISNGTVDN CFSLDHSFHQ DLYDYVKQQA LVKGSGAPIR HGSVHVKFPE
301: PDTEGNKIFD TLENEFQKLG NDQKI
Arabidopsis Description
At1g55840/F14J16_2 [Source:UniProtKB/TrEMBL;Acc:Q8W580]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.