Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr3P28070_001 | Banana | cytosol | 82.44 | 82.44 |
| GSMUA_Achr3P12050_001 | Banana | cytosol | 73.81 | 74.25 |
| GSMUA_Achr7P06060_001 | Banana | cytosol | 72.32 | 72.97 |
| GSMUA_Achr1P19200_001 | Banana | cytosol | 72.92 | 72.7 |
| VIT_19s0015g00760.t01 | Wine grape | cytosol | 67.56 | 67.16 |
| KRG82898 | Soybean | cytosol | 37.5 | 67.02 |
| GSMUA_Achr1P09480_001 | Banana | cytosol | 66.37 | 66.57 |
| Solyc07g065700.2.1 | Tomato | cytosol | 36.31 | 66.3 |
| Bra017468.1-P | Field mustard | cytosol | 64.29 | 64.86 |
| CDY41066 | Canola | cytosol | 63.99 | 64.56 |
| CDY40544 | Canola | cytosol | 63.39 | 64.55 |
| Bra022153.1-P | Field mustard | cytosol | 63.39 | 64.35 |
| CDY28908 | Canola | cytosol | 63.39 | 64.35 |
| KRH46406 | Soybean | cytosol | 49.11 | 63.71 |
| CDY25949 | Canola | cytosol | 63.1 | 63.66 |
| KRH46410 | Soybean | cytosol | 63.99 | 63.61 |
| KRH14208 | Soybean | cytosol | 59.52 | 62.11 |
| AT5G47730.1 | Thale cress | cytosol | 62.5 | 61.58 |
| Bra024920.1-P | Field mustard | cytosol | 60.71 | 61.08 |
| CDX77792 | Canola | cytosol | 60.42 | 60.78 |
| CDY17710 | Canola | cytosol | 60.42 | 60.78 |
| PGSC0003DMT400057025 | Potato | cytosol | 60.12 | 59.94 |
| KRH73923 | Soybean | cytosol | 35.12 | 56.19 |
| KRH46400 | Soybean | cytosol | 44.35 | 55.39 |
| KRH65859 | Soybean | cytosol | 23.21 | 54.55 |
| KRG98457 | Soybean | cytosol | 63.69 | 52.2 |
| KRH75081 | Soybean | extracellular, mitochondrion | 17.56 | 47.97 |
| KRG82897 | Soybean | cytosol | 13.69 | 42.2 |
| GSMUA_Achr9P01730_001 | Banana | plastid | 20.83 | 20.29 |
| GSMUA_Achr3P28830_001 | Banana | nucleus | 15.77 | 20.0 |
| GSMUA_AchrUn_... | Banana | mitochondrion | 19.64 | 17.79 |
| GSMUA_Achr4P09770_001 | Banana | cytosol | 23.21 | 17.11 |
| GSMUA_Achr6P06610_001 | Banana | mitochondrion | 20.83 | 16.09 |
| GSMUA_Achr10P... | Banana | cytosol | 26.49 | 15.95 |
| GSMUA_Achr6P03210_001 | Banana | cytosol | 27.68 | 15.66 |
| GSMUA_Achr1P12050_001 | Banana | cytosol | 27.98 | 15.02 |
| GSMUA_Achr7P06190_001 | Banana | cytosol | 25.3 | 14.73 |
| GSMUA_Achr2P09690_001 | Banana | cytosol | 27.38 | 14.7 |
| GSMUA_Achr5P23630_001 | Banana | cytosol | 26.19 | 14.62 |
| GSMUA_Achr9P22020_001 | Banana | cytosol | 27.08 | 14.42 |
| GSMUA_Achr3P11960_001 | Banana | cytosol, plastid | 25.0 | 13.77 |
| GSMUA_Achr3P04130_001 | Banana | nucleus | 25.3 | 13.64 |
| GSMUA_Achr2P14280_001 | Banana | cytosol, nucleus, plastid | 26.49 | 13.48 |
| GSMUA_Achr5P04200_001 | Banana | plastid | 24.7 | 13.28 |
| GSMUA_Achr1P25320_001 | Banana | cytosol | 25.6 | 13.15 |
| GSMUA_Achr8P24430_001 | Banana | endoplasmic reticulum | 25.6 | 13.03 |
| GSMUA_Achr3P28840_001 | Banana | mitochondrion | 12.5 | 11.41 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr4P13090_001 | EnsemblPlants:GSMUA_Achr4T13090_001 | EnsemblPlantsGene:GSMUA_Achr4G13090_001 | Gene3D:3.40.525.10 | InterPro:CRAL-TRIO_dom | InterPro:CRAL-TRIO_dom_sf |
| InterPro:CRAL/TRIO_N_dom | InterPro:CRAL/TRIO_N_dom_sf | InterPro:IPR001251 | InterPro:IPR036865 | PANTHER:PTHR23324 | PANTHER:PTHR23324:SF140 |
| PFAM:PF00650 | PFAM:PF03765 | PFscan:PS50191 | SMART:SM00516 | SMART:SM01100 | SUPFAM:SSF46938 |
| SUPFAM:SSF52087 | UniParc:UPI000296797D | UniProt:M0SNH4 | MapMan:35.1 | : | : |
Description
CRAL/TRIO domain containing protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr4G13090_001]
Coordinates
chr4:-:9755197..9763280
Molecular Weight (calculated)
38373.6 Da
IEP (calculated)
9.327
GRAVY (calculated)
-0.324
Length
336 amino acids
Sequence
(BLAST)
(BLAST)
001: MAVACQDAIK QFSALLDKVD EQLKATFQNM HQGYPTATMM RYLKARDWCV PKAYKMLVDC LNWRIQNHID DILKKPIIPA DLYRAVRDSQ LVGLSGYSKE
101: GLPVFAIGVG LSTLDKASVN QYVQSHIQIN EYRDRVILPN ATKKYGRHIG KCVKVLDMTG LKLSALSHIK LMTIITTIDD LNYPEKTQTY YVVNAPYVFS
201: ACWKVVKPLL QERTRRKIQI LQGCGRDELL KIMDYDSLPH FCRRERNGSS RISSAGADDC YSLDHPFHQQ LYNYIKQQAL IQEYATLRKQ GRFNIEVPIA
301: DTEGTKVVKK LESELHKVRD HSGLTHPLNC LHISGA
101: GLPVFAIGVG LSTLDKASVN QYVQSHIQIN EYRDRVILPN ATKKYGRHIG KCVKVLDMTG LKLSALSHIK LMTIITTIDD LNYPEKTQTY YVVNAPYVFS
201: ACWKVVKPLL QERTRRKIQI LQGCGRDELL KIMDYDSLPH FCRRERNGSS RISSAGADDC YSLDHPFHQQ LYNYIKQQAL IQEYATLRKQ GRFNIEVPIA
301: DTEGTKVVKK LESELHKVRD HSGLTHPLNC LHISGA
001: MSITNEEAVK QLRALMEDVD DSLRESYRNI HQGYPTENLL RFLKARDGNV QKAHKMLLEC LEWRTQNEID KILTKPIVPV DLYRGIRDTQ LVGVSGYSKE
101: GLPVIAIGVG LSTYDKASVH YYVQSHIQMN EYRDRVVLPS ASKKQGRPIC TCLKILDMSG LKLSALSQIK LMTAITTIDD LNYPEKTETY YVVNVPYIFS
201: ACWKTIKPLL QERTKKKIQV LKGCGKDELL KIMDYESLPH FCRREGSGSG RHISNGTVDN CFSLDHSFHQ DLYDYVKQQA LVKGSGAPIR HGSVHVKFPE
301: PDTEGNKIFD TLENEFQKLG NDQKI
101: GLPVIAIGVG LSTYDKASVH YYVQSHIQMN EYRDRVVLPS ASKKQGRPIC TCLKILDMSG LKLSALSQIK LMTAITTIDD LNYPEKTETY YVVNVPYIFS
201: ACWKTIKPLL QERTKKKIQV LKGCGKDELL KIMDYESLPH FCRREGSGSG RHISNGTVDN CFSLDHSFHQ DLYDYVKQQA LVKGSGAPIR HGSVHVKFPE
301: PDTEGNKIFD TLENEFQKLG NDQKI
Arabidopsis Description
At1g55840/F14J16_2 [Source:UniProtKB/TrEMBL;Acc:Q8W580]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.