Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr7P06060_001 | Banana | cytosol | 84.13 | 84.38 |
| GSMUA_Achr1P19200_001 | Banana | cytosol | 83.53 | 82.79 |
| GSMUA_Achr3P28070_001 | Banana | cytosol | 78.14 | 77.68 |
| GSMUA_Achr4P13090_001 | Banana | cytosol | 74.25 | 73.81 |
| VIT_19s0015g00760.t01 | Wine grape | cytosol | 74.55 | 73.67 |
| Solyc07g065700.2.1 | Tomato | cytosol | 39.22 | 71.2 |
| KRG82898 | Soybean | cytosol | 39.22 | 69.68 |
| Bra017468.1-P | Field mustard | cytosol | 68.86 | 69.07 |
| CDY40544 | Canola | cytosol | 67.66 | 68.48 |
| CDY41066 | Canola | cytosol | 68.26 | 68.47 |
| CDY28908 | Canola | cytosol | 67.66 | 68.28 |
| Bra022153.1-P | Field mustard | cytosol | 67.66 | 68.28 |
| CDY25949 | Canola | cytosol | 67.96 | 68.17 |
| GSMUA_Achr1P09480_001 | Banana | cytosol | 68.26 | 68.06 |
| PGSC0003DMT400057025 | Potato | cytosol | 68.56 | 67.95 |
| KRH46406 | Soybean | cytosol | 52.4 | 67.57 |
| AT5G47730.1 | Thale cress | cytosol | 68.26 | 66.86 |
| Bra024920.1-P | Field mustard | cytosol | 66.77 | 66.77 |
| CDX77792 | Canola | cytosol | 66.77 | 66.77 |
| KRH46410 | Soybean | cytosol | 67.37 | 66.57 |
| CDY17710 | Canola | cytosol | 66.47 | 66.47 |
| KRH14208 | Soybean | cytosol | 62.87 | 65.22 |
| KRH73923 | Soybean | cytosol | 40.42 | 64.29 |
| KRH46400 | Soybean | cytosol | 47.31 | 58.74 |
| KRH65859 | Soybean | cytosol | 24.55 | 57.34 |
| KRG98457 | Soybean | cytosol | 67.07 | 54.63 |
| KRH75081 | Soybean | extracellular, mitochondrion | 18.86 | 51.22 |
| KRG82897 | Soybean | cytosol | 15.57 | 47.71 |
| GSMUA_Achr9P01730_001 | Banana | plastid | 22.75 | 22.03 |
| GSMUA_Achr3P28830_001 | Banana | nucleus | 16.47 | 20.75 |
| GSMUA_AchrUn_... | Banana | mitochondrion | 20.36 | 18.33 |
| GSMUA_Achr6P06610_001 | Banana | mitochondrion | 23.65 | 18.16 |
| GSMUA_Achr4P09770_001 | Banana | cytosol | 24.55 | 17.98 |
| GSMUA_Achr7P06190_001 | Banana | cytosol | 28.44 | 16.46 |
| GSMUA_Achr10P... | Banana | cytosol | 26.95 | 16.13 |
| GSMUA_Achr6P03210_001 | Banana | cytosol | 28.44 | 15.99 |
| GSMUA_Achr3P11960_001 | Banana | cytosol, plastid | 29.04 | 15.9 |
| GSMUA_Achr1P12050_001 | Banana | cytosol | 29.34 | 15.65 |
| GSMUA_Achr5P23630_001 | Banana | cytosol | 28.14 | 15.61 |
| GSMUA_Achr2P09690_001 | Banana | cytosol | 27.84 | 14.86 |
| GSMUA_Achr9P22020_001 | Banana | cytosol | 27.84 | 14.74 |
| GSMUA_Achr5P04200_001 | Banana | plastid | 26.95 | 14.4 |
| GSMUA_Achr3P04130_001 | Banana | nucleus | 26.65 | 14.29 |
| GSMUA_Achr2P14280_001 | Banana | cytosol, nucleus, plastid | 27.84 | 14.09 |
| GSMUA_Achr1P25320_001 | Banana | cytosol | 26.35 | 13.46 |
| GSMUA_Achr8P24430_001 | Banana | endoplasmic reticulum | 26.35 | 13.33 |
| GSMUA_Achr3P28840_001 | Banana | mitochondrion | 11.98 | 10.87 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr3P12050_001 | EnsemblPlants:GSMUA_Achr3T12050_001 | EnsemblPlantsGene:GSMUA_Achr3G12050_001 | Gene3D:3.40.525.10 | InterPro:CRAL-TRIO_dom | InterPro:CRAL-TRIO_dom_sf |
| InterPro:CRAL/TRIO_N_dom | InterPro:CRAL/TRIO_N_dom_sf | InterPro:IPR001251 | InterPro:IPR036865 | PANTHER:PTHR23324 | PANTHER:PTHR23324:SF140 |
| PFAM:PF00650 | PFAM:PF03765 | PFscan:PS50191 | SEG:seg | SMART:SM00516 | SMART:SM01100 |
| SUPFAM:SSF46938 | SUPFAM:SSF52087 | UniParc:UPI00029504C8 | UniProt:M0SDX2 | MapMan:35.1 | : |
Description
CRAL/TRIO domain containing protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr3G12050_001]
Coordinates
chr3:+:8942165..8949454
Molecular Weight (calculated)
37879.9 Da
IEP (calculated)
8.533
GRAVY (calculated)
-0.281
Length
334 amino acids
Sequence
(BLAST)
(BLAST)
001: MGIASQDAIM QLSALVDEVD EPLKVTFKNI HMGYPSETLV RFLKAREWSI PKAHKMLVDC LNWRIQNHID IILNKPIIPA DLYRKIRDSQ LVGMSGYTKD
101: GHPVFAIGVG LSTYDKASVN YYVQSHIQIN EYRDRVILPA ASKKYGRHIG TCVKVLDMTG LKLSALNQLK LLTIISTVDD LNYPEKTETY YIVNAPYIFS
201: ACWKVVKPLL QERTRRKVQV LQGCGRDELL KIVDPASLPH FCKREGSGSS RHSTSRSDDC FSLDHPFHQQ LYNYIKQKGQ EYVALLKQGS FHVDVPEPDP
301: EGIKIVKTIE SEMHKIGDLN GLNHSLSDLK IDTV
101: GHPVFAIGVG LSTYDKASVN YYVQSHIQIN EYRDRVILPA ASKKYGRHIG TCVKVLDMTG LKLSALNQLK LLTIISTVDD LNYPEKTETY YIVNAPYIFS
201: ACWKVVKPLL QERTRRKVQV LQGCGRDELL KIVDPASLPH FCKREGSGSS RHSTSRSDDC FSLDHPFHQQ LYNYIKQKGQ EYVALLKQGS FHVDVPEPDP
301: EGIKIVKTIE SEMHKIGDLN GLNHSLSDLK IDTV
001: MGIVSEEAID EFQELMDQVE EPLKKTYERV HQGYLRENLG RFLKARDWNV CKAHTMLVEC LRWRVDNEID SILSKPIVPT ELYRDVRDSQ LIGMSGYTKE
101: GLPVFAIGVG LSTFDKASVH YYVQSHIQIN EYRDRVLLPS ISKKNGRPIT TCVKVLDMTG LKLSALSQIK LVTIISTIDD LNYPEKTNTY YVVNAPYIFS
201: ACWKVVKPLL QERTRKKVHV LSGCGRDELL KIMDFTSLPH FCRSGSSGSS HHTQSANCFS INHPFHQQLY NYVKHHYETQ GQAEPAKQGS FHVGFPEPEA
301: ERCVIAKTIE SELHKFENRN GLAVSIDDRK SSHETLANGD L
101: GLPVFAIGVG LSTFDKASVH YYVQSHIQIN EYRDRVLLPS ISKKNGRPIT TCVKVLDMTG LKLSALSQIK LVTIISTIDD LNYPEKTNTY YVVNAPYIFS
201: ACWKVVKPLL QERTRKKVHV LSGCGRDELL KIMDFTSLPH FCRSGSSGSS HHTQSANCFS INHPFHQQLY NYVKHHYETQ GQAEPAKQGS FHVGFPEPEA
301: ERCVIAKTIE SELHKFENRN GLAVSIDDRK SSHETLANGD L
Arabidopsis Description
At5g47730 [Source:UniProtKB/TrEMBL;Acc:Q9FIK6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.