Factsheet for GSMUA_Achr8P24430_001

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

nucleus 3
cytosol 2
extracellular 4
endoplasmic reticulum 6
vacuole 4
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	cytosol
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	cytosol, nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P09770_001	Banana	cytosol	56.21	81.36
Zm00001d012531_P001	Maize	mitochondrion	15.3	77.1
Zm00001d031251_P001	Maize	cytosol, mitochondrion	15.0	76.74
Zm00001d039981_P001	Maize	cytosol	14.09	75.61
GSMUA_Achr5P04200_001	Banana	plastid	66.52	70.24
GSMUA_Achr3P04130_001	Banana	nucleus	65.91	69.82
GSMUA_Achr3P28830_001	Banana	nucleus	27.12	67.55
GSMUA_Achr7P06190_001	Banana	cytosol	54.85	62.74
GSMUA_Achr3P11960_001	Banana	cytosol, plastid	56.82	61.48
Os02t0721800-01	Rice	cytosol	54.39	58.66
KXG30865	Sorghum	cytosol	54.24	58.02
Zm00001d017876_P018	Maize	cytosol	53.94	57.7
Zm00001d051674_P037	Maize	cytosol	53.48	57.68
TraesCS6B01G313500.1	Wheat	cytosol	53.48	57.03
TraesCS6D01G265200.1	Wheat	cytosol	53.33	56.87
TraesCS6A01G284800.1	Wheat	cytosol	53.33	56.77
Zm00001d043774_P001	Maize	cytosol	7.27	56.47
HORVU6Hr1G071770.19	Barley	cytosol	52.73	56.31
Os08t0497300-01	Rice	cytosol, plastid	50.15	54.8
OQU80990	Sorghum	cytosol	49.85	54.2
TraesCS7D01G238000.2	Wheat	cytosol	49.55	54.05
Os09t0481100-01	Rice	nucleus	49.24	53.19
KRH45371	Soybean	cytosol	35.45	53.18
EER96946	Sorghum	cytosol, nucleus, plastid	48.18	53.09
GSMUA_Achr9P01730_001	Banana	plastid	27.73	53.04
KRH56402	Soybean	cytosol	49.39	52.58
KRH62508	Soybean	cytosol	49.09	52.26
Zm00001d005995_P003	Maize	nucleus	47.27	52.09
VIT_19s0015g01160.t01	Wine grape	cytosol	48.79	51.85
Zm00001d014589_P001	Maize	cytosol	7.58	51.55
HORVU7Hr1G048880.11	Barley	mitochondrion	49.7	50.7
Zm00001d035770_P002	Maize	cytosol, endoplasmic reticulum	22.73	50.51
Zm00001d008240_P001	Maize	cytosol, extracellular, mitochondrion, nucleus	15.15	50.51
PGSC0003DMT400057292	Potato	nucleus	47.27	50.49
Zm00001d031316_P020	Maize	cytosol	49.24	50.39
Solyc07g066090.2.1	Tomato	nucleus	46.97	50.0
KRH07662	Soybean	cytosol	46.82	49.92
TraesCS7A01G240000.3	Wheat	endoplasmic reticulum, plastid	50.61	49.78
CDY11954	Canola	cytosol	14.7	49.74
TraesCS7B01G135600.2	Wheat	plastid	50.15	49.63
GSMUA_Achr2P09690_001	Banana	cytosol	46.97	49.52
GSMUA_Achr1P12050_001	Banana	cytosol	46.97	49.52
Zm00001d045670_P001	Maize	cytosol	14.09	49.47
AT1G55690.4	Thale cress	nucleus	46.52	49.12
CDY42378	Canola	nucleus	46.82	48.06
GSMUA_Achr10P...	Banana	cytosol	40.61	48.03
CDY10540	Canola	cytosol, nucleus, plastid	46.67	47.9
Solyc10g005740.1.1	Tomato	nucleus	44.85	47.9
GSMUA_Achr6P03210_001	Banana	cytosol	42.73	47.47
Bra030841.1-P	Field mustard	nucleus	43.03	47.41
GSMUA_Achr9P22020_001	Banana	cytosol	45.3	47.39
Zm00001d045718_P001	Maize	cytosol	18.03	47.04
CDY11957	Canola	cytosol	31.67	46.97
CDY50018	Canola	vacuole	45.3	46.79
PGSC0003DMT400022405	Potato	cytosol, nucleus	41.21	46.74
GSMUA_Achr5P23630_001	Banana	cytosol	41.82	45.85
CDY51073	Canola	mitochondrion, nucleus	35.0	45.21
Zm00001d052840_P016	Maize	plastid	49.39	44.97
GSMUA_AchrUn_...	Banana	mitochondrion	24.7	43.94
Bra002841.1-P	Field mustard	cytosol	34.39	43.4
GSMUA_Achr2P14280_001	Banana	cytosol, nucleus, plastid	43.33	43.33
AT5G56160.1	Thale cress	cytosol	37.88	43.33
CDY51966	Canola	cytosol	38.03	42.18
CDY17397	Canola	cytosol	37.88	42.02
Zm00001d010393_P001	Maize	plastid	22.58	40.93
GSMUA_Achr1P25320_001	Banana	cytosol	40.0	40.37
GSMUA_Achr6P06610_001	Banana	mitochondrion	26.52	40.23
CDY36780	Canola	plastid	33.79	39.12
Zm00001d037983_P001	Maize	cytosol	13.79	38.56
GSMUA_Achr3P28840_001	Banana	mitochondrion	19.55	35.05
Zm00001d047488_P001	Maize	nucleus	7.58	31.25
Bra038012.1-P	Field mustard	cytosol	45.15	28.17
GSMUA_Achr3P28070_001	Banana	cytosol	13.94	27.38
Bra028944.1-P	Field mustard	plastid	28.64	27.16
GSMUA_Achr7P06060_001	Banana	cytosol	13.48	26.73
GSMUA_Achr3P12050_001	Banana	cytosol	13.33	26.35
GSMUA_Achr4P13090_001	Banana	cytosol	13.03	25.6
GSMUA_Achr1P19200_001	Banana	cytosol	12.88	25.22
GSMUA_Achr1P09480_001	Banana	cytosol	12.58	24.78
Zm00001d035370_P003	Maize	plastid	12.58	20.34
Zm00001d005778_P001	Maize	plastid	7.42	17.44
CDY36781	Canola	extracellular	0.0	0.0
Bra002840.1-P	Field mustard	cytosol	0.0	0.0

Protein Annotations

Gene3D:1.10.8.20	Gene3D:3.40.525.10	MapMan:35.1	InterPro:CRAL-TRIO_dom	InterPro:CRAL-TRIO_dom_sf	InterPro:CRAL/TRIO_N_dom
InterPro:CRAL/TRIO_N_dom_sf	ncoils:Coil	EnsemblPlantsGene:GSMUA_Achr8G24430_001	EnsemblPlants:GSMUA_Achr8P24430_001	EnsemblPlants:GSMUA_Achr8T24430_001	InterPro:IPR001251
InterPro:IPR036865	UniProt:M0TT96	PFAM:PF00650	PFAM:PF03765	PFscan:PS50191	PFscan:PS51257
PANTHER:PTHR23324	PANTHER:PTHR23324:SF73	SMART:SM00516	SMART:SM01100	SUPFAM:SSF46938	SUPFAM:SSF52087
UniParc:UPI000294B1C4	SEG:seg	:	:	:	:

Description

Putative Sec14 cytosolic factor [Source:GMGC_GENE;Acc:GSMUA_Achr8G24430_001]

Coordinates

chr8:-:28610277..28617279

Molecular Weight (calculated)

75284.8 Da

IEP (calculated)

8.206

GRAVY (calculated)

-0.540

Length

660 amino acids

Sequence
(BLAST)

001: MVYTVKLKIL CICAAAFWNP SFSGCSSLLN LEVLAKGLVP RKEMSVYHAE GLEGSYSYEE RKERRSDVEN SEDERRKTRI GSLKKKALNA SSRFTHSLKK
101: RGRRRVDFRV PSVPIEDVRD AEEEQAVSSF RQQLIAKDLL PNKHDDYHTL LRFLKARKFD FEKATHMWAE MLQWRKEFGT DTILEDFEFE ELEEVLRYYP
201: QGYHGVDKEG RPVYIERLGK AEPNKLMHVT TVERYLKYHV QEFERALNEK FPACSIAAKK HIGSSTTILD VQGVGLKNFS KTARDLLLNM QKIDGDYYPE
301: TLHQMFVVNA GHGFKLLWNT VKGFLDPKTT SKIHVLGTKY QSRLLEAIDS SQLPEFLGGS CTCYYERGCL RSNRGPWNDP VILKFVQGID TTSARENRHT
401: SDGEKIGHSC RRTSQTSAAE SVSDADDLCS PVIPVTADNA RLSPIYKEVR EADITPYQSC DDHSATVDKV VDNGRRGSGF AVKASKELKD LDYTSATAAP
501: HSFGNSIAGK HNNIKDDTEG KLDSFARTLV AFLIKMLSFF RILWSRQDRR LNVHLSNALD LACNKNSTTE ALKEDCVTSC MERLQKLELM LNELSNKPAE
601: IPREKEHMIL DSMDRIKCVE FDIHKTNKVL QATLMKQMEI EATLEALKDS DIKVKLFSRK

Best Arabidopsis Sequence Match ( AT1G55690.3 )
(BLAST)

001: MSGVEEISTL DEFRERRSDF EISEDERRRS KIGNLKKKAI NASTKFTHSL KKRGKRKIDY RVPAVSIEDV RDEKEESVVL EFRRKLLERD LLPPRHDEYH
101: TLLRFLKARD LNIEKTTQLW EEMLRWRKEY GTDTILEDFD FEELEEVLQY YPQGYHGVDK EGRPVYIERL GKAHPSKLMR ITTIDRYLKY HVQEFERALQ
201: EKFPACSIAA KRRICSTTTI LDVQGLGIKN FTPTAANLVA AMSKIDNSYY PETLHRMYIV NAGTGFKKML WPAAQKFLDA KTIAKIHVLE PKSLFKLHEV
301: IDSSQLPEFL GGSCSCFGDG GGCLRSNKGP WNDPEIMKLI YHGESSLFRQ STRKLTDPHY SSSYISIHPS KAIQAETSAA ESISCSDVPS SPTGRLCSAS
401: SHVNSAYEEA RASDVNGYYS CDDKFAIPDK ATNRKGQERQ SQYQMRELNA TTIGLKCETS SPGAPIIRWL HDLRVMIDKI KCENLAKRLL SLMLKLAAVF
501: RYTPLELLRS QTTVSPSSLT EDDSRCSLIS PPPREPTMKD RILPCLERIQ KLEKSYEDIR NKPVAIPVEK ERMLMDSLDR IKSVEFDLDK TKRLLHATVM
601: KQMEITEMLQ NIRDSQLHVR T

Arabidopsis Description

SFH13Phosphatidylinositol/phosphatidylcholine transfer protein SFH13 [Source:UniProtKB/Swiss-Prot;Acc:Q501H5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.