Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY42378 | Canola | nucleus | 83.84 | 81.49 |
| CDY10540 | Canola | cytosol, nucleus, plastid | 83.36 | 81.03 |
| Bra030841.1-P | Field mustard | nucleus | 77.28 | 80.63 |
| CDY50018 | Canola | vacuole | 80.32 | 78.56 |
| CDY51073 | Canola | mitochondrion, nucleus | 62.08 | 75.93 |
| Zm00001d039981_P001 | Maize | cytosol | 14.24 | 72.36 |
| Zm00001d031251_P001 | Maize | cytosol, mitochondrion | 13.92 | 67.44 |
| HORVU1Hr1G088100.1 | Barley | cytosol | 16.96 | 65.84 |
| VIT_19s0015g01160.t01 | Wine grape | cytosol | 64.96 | 65.38 |
| KRH62508 | Soybean | cytosol | 61.76 | 62.26 |
| KRH56402 | Soybean | cytosol | 61.44 | 61.94 |
| HORVU7Hr1G037200.1 | Barley | nucleus | 21.12 | 61.68 |
| Solyc07g066090.2.1 | Tomato | nucleus | 60.8 | 61.29 |
| PGSC0003DMT400057292 | Potato | nucleus | 60.16 | 60.84 |
| KRH45371 | Soybean | cytosol | 42.72 | 60.68 |
| Zm00001d012531_P001 | Maize | mitochondrion | 12.64 | 60.31 |
| HORVU3Hr1G112740.3 | Barley | nucleus | 21.28 | 59.38 |
| HORVU7Hr1G040650.2 | Barley | cytosol, nucleus, plastid | 21.12 | 58.93 |
| Solyc10g005740.1.1 | Tomato | nucleus | 57.92 | 58.58 |
| KRH07662 | Soybean | cytosol | 57.28 | 57.84 |
| GSMUA_Achr4P09770_001 | Banana | cytosol | 40.0 | 54.82 |
| PGSC0003DMT400022405 | Potato | cytosol, nucleus | 50.24 | 53.95 |
| AT5G56160.1 | Thale cress | cytosol | 49.44 | 53.55 |
| Zm00001d043774_P001 | Maize | cytosol | 7.2 | 52.94 |
| GSMUA_Achr7P06190_001 | Banana | cytosol | 46.72 | 50.61 |
| GSMUA_Achr3P04130_001 | Banana | nucleus | 49.12 | 49.28 |
| GSMUA_Achr3P11960_001 | Banana | cytosol, plastid | 47.52 | 48.69 |
| KXG40069 | Sorghum | nucleus | 48.8 | 48.41 |
| Os02t0721800-01 | Rice | cytosol | 47.36 | 48.37 |
| Os08t0341700-01 | Rice | nucleus | 49.12 | 48.19 |
| GSMUA_Achr5P04200_001 | Banana | plastid | 48.16 | 48.16 |
| TraesCS2B01G533900.1 | Wheat | nucleus | 48.0 | 47.62 |
| Bra038012.1-P | Field mustard | cytosol | 80.32 | 47.45 |
| Zm00001d014589_P001 | Maize | cytosol | 7.36 | 47.42 |
| TraesCS2D01G506400.1 | Wheat | nucleus | 48.0 | 47.39 |
| TraesCS6D01G265200.1 | Wheat | cytosol | 46.88 | 47.33 |
| Zm00001d017876_P018 | Maize | cytosol | 46.72 | 47.33 |
| HORVU6Hr1G071770.19 | Barley | cytosol | 46.72 | 47.25 |
| TraesCS6B01G313500.1 | Wheat | cytosol | 46.72 | 47.17 |
| KXG30865 | Sorghum | cytosol | 46.56 | 47.16 |
| OQU80990 | Sorghum | cytosol | 45.76 | 47.12 |
| TraesCS6A01G284800.1 | Wheat | cytosol | 46.72 | 47.1 |
| Zm00001d045670_P001 | Maize | cytosol | 14.08 | 46.81 |
| TraesCS7D01G238000.2 | Wheat | cytosol | 45.12 | 46.61 |
| GSMUA_Achr8P24430_001 | Banana | endoplasmic reticulum | 49.12 | 46.52 |
| Zm00001d051674_P037 | Maize | cytosol | 45.44 | 46.41 |
| Zm00001d005995_P003 | Maize | nucleus | 44.0 | 45.91 |
| Os08t0497300-01 | Rice | cytosol, plastid | 44.32 | 45.86 |
| Zm00001d035770_P002 | Maize | cytosol, endoplasmic reticulum | 21.76 | 45.79 |
| EER96946 | Sorghum | cytosol, nucleus, plastid | 43.84 | 45.74 |
| Os09t0481100-01 | Rice | nucleus | 44.48 | 45.5 |
| AT3G24840.3 | Thale cress | cytosol | 40.8 | 43.97 |
| HORVU7Hr1G048880.11 | Barley | mitochondrion | 44.64 | 43.12 |
| Zm00001d031316_P020 | Maize | cytosol | 44.32 | 42.95 |
| TraesCS7B01G135600.2 | Wheat | plastid | 45.28 | 42.43 |
| TraesCS7A01G240000.3 | Wheat | endoplasmic reticulum, plastid | 45.44 | 42.32 |
| Zm00001d050131_P002 | Maize | cytosol | 43.2 | 42.25 |
| AT4G39170.1 | Thale cress | cytosol, nucleus, plastid | 41.44 | 42.18 |
| AT4G39180.1 | Thale cress | cytosol | 37.28 | 42.06 |
| Zm00001d045718_P001 | Maize | cytosol | 16.96 | 41.9 |
| AT2G21540.2 | Thale cress | cytosol, nucleus, vacuole | 36.48 | 41.61 |
| Zm00001d008240_P001 | Maize | cytosol, extracellular, mitochondrion, nucleus | 13.12 | 41.41 |
| AT2G21520.3 | Thale cress | cytosol | 41.44 | 40.66 |
| AT4G34580.2 | Thale cress | cytosol | 35.36 | 39.89 |
| AT5G47510.4 | Thale cress | cytosol | 23.84 | 39.52 |
| AT1G19650.1 | Thale cress | cytosol | 38.24 | 39.31 |
| HORVU1Hr1G091860.1 | Barley | cytosol | 10.24 | 39.26 |
| AT2G16380.1 | Thale cress | cytosol | 34.08 | 38.94 |
| Zm00001d052840_P016 | Maize | plastid | 45.12 | 38.9 |
| AT4G36490.1 | Thale cress | plastid | 33.28 | 38.31 |
| AT1G75370.2 | Thale cress | cytosol | 39.52 | 36.98 |
| AT2G18180.1 | Thale cress | plastid | 32.64 | 36.56 |
| Zm00001d037983_P001 | Maize | cytosol | 13.76 | 36.44 |
| Zm00001d010393_P001 | Maize | plastid | 20.8 | 35.71 |
| Zm00001d047488_P001 | Maize | nucleus | 7.04 | 27.5 |
| AT1G55840.1 | Thale cress | cytosol | 12.96 | 24.92 |
| AT5G47730.1 | Thale cress | cytosol | 13.44 | 24.63 |
| Zm00001d035370_P003 | Maize | plastid | 12.8 | 19.61 |
| Zm00001d005778_P001 | Maize | plastid | 6.4 | 14.23 |
Protein Annotations
| Gene3D:1.10.8.20 | Gene3D:3.40.525.10 | MapMan:35.1 | EntrezGene:842018 | ProteinID:AAF79506.1 | ProteinID:AEE33284.1 |
| ProteinID:AEE33286.1 | ProteinID:ANM61121.1 | ProteinID:ANM61122.1 | ArrayExpress:AT1G55690 | EnsemblPlantsGene:AT1G55690 | RefSeq:AT1G55690 |
| TAIR:AT1G55690 | RefSeq:AT1G55690-TAIR-G | EnsemblPlants:AT1G55690.4 | Unigene:At.21485 | EMBL:BT021992 | EMBL:BT046119 |
| InterPro:CRAL-TRIO_dom | InterPro:CRAL-TRIO_dom_sf | InterPro:CRAL/TRIO_N_dom | InterPro:CRAL/TRIO_N_dom_sf | GO:GO:0000139 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005794 | GO:GO:0005886 | GO:GO:0006810 |
| GO:GO:0008150 | GO:GO:0015031 | GO:GO:0016020 | InterPro:IPR001251 | InterPro:IPR036865 | RefSeq:NP_001323358.1 |
| RefSeq:NP_001323359.1 | RefSeq:NP_849815.1 | RefSeq:NP_849816.1 | PFAM:PF00650 | PFscan:PS50191 | PANTHER:PTHR23324 |
| PANTHER:PTHR23324:SF84 | UniProt:Q501H5 | SMART:SM00516 | SMART:SM01100 | SUPFAM:SSF46938 | SUPFAM:SSF52087 |
| UniParc:UPI00001970B7 | SEG:seg | : | : | : | : |
Description
SFH13Phosphatidylinositol/phosphatidylcholine transfer protein SFH13 [Source:UniProtKB/Swiss-Prot;Acc:Q501H5]
Coordinates
chr1:-:20808199..20813030
Molecular Weight (calculated)
72037.6 Da
IEP (calculated)
8.920
GRAVY (calculated)
-0.590
Length
625 amino acids
Sequence
(BLAST)
(BLAST)
001: MSGVEEISTL DEFRERRSDF EISEDERRRS KIGNLKKKAI NASTKFTHSL KKRGKRKIDY RVPAVSIEDV RDEKEESVVL EFRRKLLERD LLPPRHDEYH
101: TLLRFLKARD LNIEKTTQLW EEMLRWRKEY GTDTILEDFD FEELEEVLQY YPQGYHGVDK EGRPVYIERL GKAHPSKLMR ITTIDRYLKY HVQEFERALQ
201: EKFPACSIAA KRRICSTTTI LDVQGLGIKN FTPTAANLVA AMSKIDNSYY PETLHRMYIV NAGTGFKKML WPAAQKFLDA KTIAKIHVLE PKSLFKLHEV
301: IDSSQLPEFL GGSCSCFGDG GGCLRSNKGP WNDPEIMKLI YHGESSLFRQ STRKLTDPHY SSSYISIHPS KAIQAETSAA ESISCSDVPS SPTGRLCSAS
401: SHVNSAYEEA RASDVNGYYS CDDKFAIPDK ATNRKGQERQ SQYQMRELNA TTIGLKCETS SPGAPIIRWL HDLRVMIDKI KCENLAKRLL SLMLKLAAVF
501: RYTPLELLRS QTTVSPSSLT EDDSRCSLIS PPPREPTMKD RILPCLERIQ KLEKSYEDIR NKPVAIPVEK ERMLMDSLDR IKSVEFDLDK TKRLLHATVM
601: KQMEITEMLQ NIRDSQLHRR RRLFC
101: TLLRFLKARD LNIEKTTQLW EEMLRWRKEY GTDTILEDFD FEELEEVLQY YPQGYHGVDK EGRPVYIERL GKAHPSKLMR ITTIDRYLKY HVQEFERALQ
201: EKFPACSIAA KRRICSTTTI LDVQGLGIKN FTPTAANLVA AMSKIDNSYY PETLHRMYIV NAGTGFKKML WPAAQKFLDA KTIAKIHVLE PKSLFKLHEV
301: IDSSQLPEFL GGSCSCFGDG GGCLRSNKGP WNDPEIMKLI YHGESSLFRQ STRKLTDPHY SSSYISIHPS KAIQAETSAA ESISCSDVPS SPTGRLCSAS
401: SHVNSAYEEA RASDVNGYYS CDDKFAIPDK ATNRKGQERQ SQYQMRELNA TTIGLKCETS SPGAPIIRWL HDLRVMIDKI KCENLAKRLL SLMLKLAAVF
501: RYTPLELLRS QTTVSPSSLT EDDSRCSLIS PPPREPTMKD RILPCLERIQ KLEKSYEDIR NKPVAIPVEK ERMLMDSLDR IKSVEFDLDK TKRLLHATVM
601: KQMEITEMLQ NIRDSQLHRR RRLFC
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.