Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- nucleus 1
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT4G36490.1 | Thale cress | plastid | 80.82 | 83.06 |
| KRH76738 | Soybean | plastid | 56.81 | 65.9 |
| KRH28724 | Soybean | plastid | 56.27 | 65.01 |
| KRH08168 | Soybean | plastid | 63.62 | 63.96 |
| KRH69861 | Soybean | plastid | 62.9 | 63.24 |
| AT2G21540.2 | Thale cress | cytosol, nucleus, vacuole | 56.99 | 58.03 |
| PGSC0003DMT400001903 | Potato | cytosol, nucleus, plastid | 58.6 | 56.97 |
| Solyc01g109860.2.1 | Tomato | cytosol, nucleus, plastid | 58.24 | 56.62 |
| PGSC0003DMT400043532 | Potato | cytosol | 56.45 | 56.55 |
| Solyc10g053900.1.1 | Tomato | cytosol, plastid | 57.35 | 56.24 |
| Solyc11g040280.1.1 | Tomato | cytosol | 60.04 | 56.02 |
| PGSC0003DMT400021690 | Potato | nucleus | 60.22 | 55.63 |
| AT4G39180.1 | Thale cress | cytosol | 55.2 | 55.6 |
| AT4G34580.2 | Thale cress | cytosol | 54.66 | 55.05 |
| GSMUA_Achr6P03210_001 | Banana | cytosol | 55.73 | 52.36 |
| OQU84321 | Sorghum | cytosol | 52.87 | 52.3 |
| VIT_04s0023g02400.t01 | Wine grape | cytosol, nucleus, plastid | 50.0 | 52.05 |
| GSMUA_Achr5P23630_001 | Banana | cytosol | 55.91 | 51.83 |
| TraesCS2D01G335700.2 | Wheat | nucleus | 53.58 | 50.59 |
| HORVU2Hr1G082530.1 | Barley | cytosol | 52.33 | 50.43 |
| TraesCS2A01G327200.2 | Wheat | nucleus | 53.23 | 50.25 |
| TraesCS2B01G354800.2 | Wheat | nucleus | 53.05 | 50.08 |
| AT2G16380.1 | Thale cress | cytosol | 48.92 | 49.91 |
| Os10t0122600-01 | Rice | cytosol, nucleus, plastid | 53.41 | 49.83 |
| Os02t0440900-00 | Rice | cytosol | 52.15 | 48.66 |
| Zm00001d016601_P006 | Maize | cytosol | 52.33 | 48.26 |
| TraesCS6A01G097200.1 | Wheat | plastid | 52.69 | 47.96 |
| TraesCS6B01G125700.1 | Wheat | plastid | 52.69 | 47.8 |
| GSMUA_Achr2P14280_001 | Banana | cytosol, nucleus, plastid | 56.45 | 47.73 |
| AT4G39170.1 | Thale cress | cytosol, nucleus, plastid | 52.33 | 47.56 |
| Os02t0133200-01 | Rice | plasma membrane | 53.76 | 47.47 |
| TraesCS6D01G085200.1 | Wheat | plastid | 52.15 | 47.32 |
| OQU85018 | Sorghum | nucleus | 51.97 | 47.31 |
| HORVU6Hr1G017580.5 | Barley | plastid | 53.05 | 47.13 |
| Zm00001d015175_P002 | Maize | plastid | 53.23 | 46.05 |
| AT2G21520.3 | Thale cress | cytosol | 51.79 | 45.37 |
| AT1G19650.1 | Thale cress | cytosol | 48.57 | 44.57 |
| AT1G75370.2 | Thale cress | cytosol | 49.28 | 41.17 |
| AT5G47510.4 | Thale cress | cytosol | 27.78 | 41.11 |
| AT3G24840.3 | Thale cress | cytosol | 40.68 | 39.14 |
| AT5G56160.1 | Thale cress | cytosol | 33.87 | 32.76 |
| AT1G55690.4 | Thale cress | nucleus | 36.56 | 32.64 |
| AT1G55840.1 | Thale cress | cytosol | 14.16 | 24.31 |
| AT5G47730.1 | Thale cress | cytosol | 13.98 | 22.87 |
Protein Annotations
| Gene3D:1.10.8.20 | Gene3D:3.40.525.10 | MapMan:35.1 | EntrezGene:816331 | ProteinID:AAD31348.1 | ProteinID:AEC06735.1 |
| ArrayExpress:AT2G18180 | EnsemblPlantsGene:AT2G18180 | RefSeq:AT2G18180 | TAIR:AT2G18180 | RefSeq:AT2G18180-TAIR-G | EnsemblPlants:AT2G18180.1 |
| TAIR:AT2G18180.1 | InterPro:CRAL-TRIO_dom | InterPro:CRAL-TRIO_dom_sf | InterPro:CRAL/TRIO_N_dom | InterPro:CRAL/TRIO_N_dom_sf | ncoils:Coil |
| GO:GO:0000139 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005794 |
| GO:GO:0005886 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0015031 | GO:GO:0016020 | InterPro:IPR001251 |
| InterPro:IPR036865 | RefSeq:NP_179410.1 | PFAM:PF00650 | PFAM:PF03765 | PO:PO:0000037 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001078 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | PFscan:PS50191 |
| PANTHER:PTHR23324 | PANTHER:PTHR23324:SF55 | UniProt:Q9SI13 | SMART:SM00516 | SMART:SM01100 | SUPFAM:SSF46938 |
| SUPFAM:SSF52087 | UniParc:UPI000009CFD2 | SEG:seg | : | : | : |
Description
SFH10Phosphatidylinositol/phosphatidylcholine transfer protein SFH10 [Source:UniProtKB/Swiss-Prot;Acc:Q9SI13]
Coordinates
chr2:-:7910748..7913855
Molecular Weight (calculated)
63362.1 Da
IEP (calculated)
7.654
GRAVY (calculated)
-0.478
Length
558 amino acids
Sequence
(BLAST)
(BLAST)
001: MSLNVDLDVC VLERPNVCSF KKRSCSKLSC SLTKKRRSSK VMSVEIFEDE HDAEELKVVD AFRQVLILDE LLPDKHDDYH MMLRFLKARK FDLEKTNQMW
101: SDMLRWRKEF GADTVMEDFE FKEIDEVLKY YPQGHHGVDK EGRPVYIERL GQVDSTKLMQ VTTMDRYVNY HVMEFERTFN VKFPACSIAA KKHIDQSTTI
201: LDVQGVGLKN FNKAARDLIT RLQKVDGDNY PETLNRMFII NAGSGFRMLW NTVKSFLDPK TTAKIHVLGN KYQSKLLEII DASELPEFLG GSCTCADNGG
301: CMRSDKGPWN NPDIMKRVNN GDHICSKRSQ ADNAGENIIS QGNNSAVEEA PETDQSQPSP CQNVVVAHPA WNIPEAHKFS LSKRDVYAIQ EACKATNESG
401: RSPIFTGVMA FVMGVVTMIR VTKNVPRKLT ESTIYSSPVY CDENSMNKSS MHGKKMATTT ISGEDFMAVM KRMAELEQKV TNLSAQPATM PPEKEEMLNA
501: AISRADFLEQ ELAATKKALD DSLTRQEDLV AYVERKKKKK KLVRFQINAY LTNFCFGV
101: SDMLRWRKEF GADTVMEDFE FKEIDEVLKY YPQGHHGVDK EGRPVYIERL GQVDSTKLMQ VTTMDRYVNY HVMEFERTFN VKFPACSIAA KKHIDQSTTI
201: LDVQGVGLKN FNKAARDLIT RLQKVDGDNY PETLNRMFII NAGSGFRMLW NTVKSFLDPK TTAKIHVLGN KYQSKLLEII DASELPEFLG GSCTCADNGG
301: CMRSDKGPWN NPDIMKRVNN GDHICSKRSQ ADNAGENIIS QGNNSAVEEA PETDQSQPSP CQNVVVAHPA WNIPEAHKFS LSKRDVYAIQ EACKATNESG
401: RSPIFTGVMA FVMGVVTMIR VTKNVPRKLT ESTIYSSPVY CDENSMNKSS MHGKKMATTT ISGEDFMAVM KRMAELEQKV TNLSAQPATM PPEKEEMLNA
501: AISRADFLEQ ELAATKKALD DSLTRQEDLV AYVERKKKKK KLVRFQINAY LTNFCFGV
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.