Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 3
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G36490.1 | KRG98502 | AT4G26630.1 | 25387881 |
| AT4G36490.1 | KRG98507 | AT4G26630.1 | 25387881 |
| AT4G36490.1 | KRH46360 | AT4G26630.1 | 25387881 |
| AT4G36490.1 | KRH46364 | AT4G26630.1 | 25387881 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH76738 | Soybean | plastid | 96.07 | 96.47 |
| KRH69861 | Soybean | plastid | 77.43 | 67.39 |
| KRH08168 | Soybean | plastid | 77.23 | 67.21 |
| KRH24439 | Soybean | plastid | 41.41 | 60.98 |
| AT4G36490.1 | Thale cress | plastid | 66.25 | 58.93 |
| AT2G18180.1 | Thale cress | plastid | 65.01 | 56.27 |
| PGSC0003DMT400001903 | Potato | cytosol, nucleus, plastid | 65.22 | 54.88 |
| PGSC0003DMT400043532 | Potato | cytosol | 63.15 | 54.76 |
| Solyc01g109860.2.1 | Tomato | cytosol, nucleus, plastid | 64.6 | 54.36 |
| Solyc10g053900.1.1 | Tomato | cytosol, plastid | 62.94 | 53.43 |
| KRH29420 | Soybean | cytosol, nucleus, plastid | 61.7 | 52.93 |
| GSMUA_Achr6P03210_001 | Banana | cytosol | 65.01 | 52.86 |
| GSMUA_Achr5P23630_001 | Banana | cytosol | 65.42 | 52.49 |
| KRH51503 | Soybean | cytosol | 62.11 | 52.36 |
| Solyc11g040280.1.1 | Tomato | cytosol | 64.8 | 52.34 |
| KRH60806 | Soybean | cytosol | 61.7 | 52.1 |
| PGSC0003DMT400021690 | Potato | nucleus | 65.01 | 51.99 |
| VIT_04s0023g02400.t01 | Wine grape | cytosol, nucleus, plastid | 55.49 | 50.0 |
| OQU84321 | Sorghum | cytosol | 57.35 | 49.11 |
| CDX69225 | Canola | mitochondrion | 61.49 | 48.93 |
| Os10t0122600-01 | Rice | cytosol, nucleus, plastid | 59.42 | 47.99 |
| HORVU2Hr1G082530.1 | Barley | cytosol | 57.14 | 47.67 |
| Os02t0440900-00 | Rice | cytosol | 59.01 | 47.66 |
| GSMUA_Achr2P14280_001 | Banana | cytosol, nucleus, plastid | 64.6 | 47.27 |
| TraesCS2D01G335700.2 | Wheat | nucleus | 57.76 | 47.21 |
| TraesCS2A01G327200.2 | Wheat | nucleus | 57.56 | 47.04 |
| KRH60804 | Soybean | cytosol | 60.66 | 46.96 |
| TraesCS2B01G354800.2 | Wheat | nucleus | 57.35 | 46.87 |
| KRG99756 | Soybean | cytosol | 37.27 | 46.75 |
| Zm00001d016601_P006 | Maize | cytosol | 57.56 | 45.95 |
| KRH29416 | Soybean | cytosol | 59.63 | 45.79 |
| KRH24438 | Soybean | cytosol | 59.63 | 45.79 |
| OQU85018 | Sorghum | nucleus | 57.97 | 45.68 |
| KRH51809 | Soybean | nucleus | 55.9 | 45.61 |
| KRH61132 | Soybean | cytosol | 55.9 | 45.61 |
| TraesCS6A01G097200.1 | Wheat | plastid | 57.56 | 45.35 |
| TraesCS6D01G085200.1 | Wheat | plastid | 57.56 | 45.2 |
| KRH51499 | Soybean | cytosol | 59.83 | 45.09 |
| TraesCS6B01G125700.1 | Wheat | plastid | 57.35 | 45.04 |
| KRH15161 | Soybean | cytosol | 58.59 | 44.92 |
| KRH05860 | Soybean | cytosol | 57.97 | 44.8 |
| Os02t0133200-01 | Rice | plasma membrane | 58.39 | 44.62 |
| HORVU6Hr1G017580.5 | Barley | plastid | 57.97 | 44.59 |
| Zm00001d015175_P002 | Maize | plastid | 57.97 | 43.41 |
| KRH45371 | Soybean | cytosol | 36.02 | 39.55 |
| KRH77370 | Soybean | cytosol | 37.68 | 39.31 |
| KRH28067 | Soybean | cytosol | 37.27 | 39.13 |
| KRG99773 | Soybean | cytosol, nucleus, plastid | 46.79 | 38.05 |
| KRH46724 | Soybean | cytosol, nucleus, plastid | 46.58 | 37.88 |
| KRH62508 | Soybean | cytosol | 46.17 | 35.97 |
| KRH56402 | Soybean | cytosol | 45.55 | 35.48 |
| KRH07662 | Soybean | cytosol | 45.34 | 35.38 |
| KRG99658 | Soybean | cytosol, nucleus, plastid | 4.97 | 31.58 |
| KRG99659 | Soybean | cytosol, nucleus, plastid | 4.97 | 31.58 |
| KRH51210 | Soybean | cytosol | 16.77 | 24.92 |
| KRH14208 | Soybean | cytosol | 16.56 | 24.84 |
| KRH01941 | Soybean | cytosol | 16.56 | 24.69 |
| KRH36621 | Soybean | cytosol | 16.77 | 24.62 |
| KRH75081 | Soybean | extracellular, mitochondrion | 6.21 | 24.39 |
| KRH11617 | Soybean | cytosol | 16.56 | 24.32 |
| KRH46410 | Soybean | cytosol | 16.77 | 23.96 |
| KRH65859 | Soybean | cytosol | 7.04 | 23.78 |
| KRH73923 | Soybean | cytosol | 10.14 | 23.33 |
| KRH46406 | Soybean | cytosol | 11.8 | 22.01 |
| KRG82898 | Soybean | cytosol | 8.49 | 21.81 |
| KRH46400 | Soybean | cytosol | 11.18 | 20.07 |
| KRG98457 | Soybean | cytosol | 16.77 | 19.76 |
| KRG82897 | Soybean | cytosol | 3.93 | 17.43 |
| KRG99755 | Soybean | endoplasmic reticulum | 5.59 | 13.78 |
Protein Annotations
| Gene3D:1.10.8.20 | EntrezGene:100796901 | Gene3D:3.40.525.10 | MapMan:35.1 | EMBL:ACUP02006761 | InterPro:CRAL-TRIO_dom |
| InterPro:CRAL-TRIO_dom_sf | InterPro:CRAL/TRIO_N_dom | InterPro:CRAL/TRIO_N_dom_sf | EnsemblPlantsGene:GLYMA_11G071900 | GO:GO:0003674 | GO:GO:0005215 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0006810 | GO:GO:0008150 | InterPro:IPR001251 |
| InterPro:IPR036865 | UniProt:K7LNG9 | EnsemblPlants:KRH28724 | ProteinID:KRH28724 | ProteinID:KRH28724.1 | ProteinID:KRH28725.1 |
| PFAM:PF00650 | PFAM:PF03765 | PRINTS:PR00180 | PFscan:PS50191 | PANTHER:PTHR23324 | PANTHER:PTHR23324:SF55 |
| SMART:SM00516 | SMART:SM01100 | SUPFAM:SSF46938 | SUPFAM:SSF52087 | UniParc:UPI000295F19B | SEG:seg |
Description
hypothetical protein
Coordinates
chr11:+:5362419..5368234
Molecular Weight (calculated)
55030.1 Da
IEP (calculated)
8.982
GRAVY (calculated)
-0.694
Length
483 amino acids
Sequence
(BLAST)
(BLAST)
001: MSGTMSPKGS FKKKAINASN MLRNSLTRKG RRSSKVMSVE IEDVHDAEEL KIVDEFRQAL ILDELLPAKH DDYHMMLRFL KARKFDIEKT KQMWSEMLKW
101: RKEFGADTIT EDFEFKELDE VLQYYPQGHH GVDKDGRPVY IERLGQVDAT KMMQVTTMDR YIKYHVKEFE RTFDVKFAAC SIAAKKHIDQ STTILDVQGV
201: GLKSFSKHAR ELVTRLQKID GDNYPETLNR MFIINAGSGF RILWNTVKSF LDPKTTAKIN VLGNKYDTKL LEIIDASELP EFLGGTCTCA DQGGCMRSDK
301: GPWKDAEVMR MVQNGDHKCS KKSASQGEEE KENSEEHKTS KLEANHTPQL SPVVEEEVPA TKTSQPLSPM ADKSAVKKVD EKASKPKDLA PTADKTAAST
401: EFSTVMKRMA ELEEKIVTIN NKPTAMPPEK EQMLNATITR ADDLEKQLLA TKKALEDSLV KQEELSAYLD KKKKKKKKRF FFF
101: RKEFGADTIT EDFEFKELDE VLQYYPQGHH GVDKDGRPVY IERLGQVDAT KMMQVTTMDR YIKYHVKEFE RTFDVKFAAC SIAAKKHIDQ STTILDVQGV
201: GLKSFSKHAR ELVTRLQKID GDNYPETLNR MFIINAGSGF RILWNTVKSF LDPKTTAKIN VLGNKYDTKL LEIIDASELP EFLGGTCTCA DQGGCMRSDK
301: GPWKDAEVMR MVQNGDHKCS KKSASQGEEE KENSEEHKTS KLEANHTPQL SPVVEEEVPA TKTSQPLSPM ADKSAVKKVD EKASKPKDLA PTADKTAAST
401: EFSTVMKRMA ELEEKIVTIN NKPTAMPPEK EQMLNATITR ADDLEKQLLA TKKALEDSLV KQEELSAYLD KKKKKKKKRF FFF
001: MSLNVDLDVC VLERPNVCSF KKRSCSKLSC SLTKKRRSSK VMSVEIFEDE HDAEELKVVD AFRQVLILDE LLPDKHDDYH MMLRFLKARK FDLEKTNQMW
101: SDMLRWRKEF GADTVMEDFE FKEIDEVLKY YPQGHHGVDK EGRPVYIERL GQVDSTKLMQ VTTMDRYVNY HVMEFERTFN VKFPACSIAA KKHIDQSTTI
201: LDVQGVGLKN FNKAARDLIT RLQKVDGDNY PETLNRMFII NAGSGFRMLW NTVKSFLDPK TTAKIHVLGN KYQSKLLEII DASELPEFLG GSCTCADNGG
301: CMRSDKGPWN NPDIMKRVNN GDHICSKRSQ ADNAGENIIS QGNNSAVEEA PETDQSQPSP CQNVVVAHPA WNIPEAHKFS LSKRDVYAIQ EACKATNESG
401: RSPIFTGVMA FVMGVVTMIR VTKNVPRKLT ESTIYSSPVY CDENSMNKSS MHGKKMATTT ISGEDFMAVM KRMAELEQKV TNLSAQPATM PPEKEEMLNA
501: AISRADFLEQ ELAATKKALD DSLTRQEDLV AYVERKKKKK KLVRFQINAY LTNFCFGV
101: SDMLRWRKEF GADTVMEDFE FKEIDEVLKY YPQGHHGVDK EGRPVYIERL GQVDSTKLMQ VTTMDRYVNY HVMEFERTFN VKFPACSIAA KKHIDQSTTI
201: LDVQGVGLKN FNKAARDLIT RLQKVDGDNY PETLNRMFII NAGSGFRMLW NTVKSFLDPK TTAKIHVLGN KYQSKLLEII DASELPEFLG GSCTCADNGG
301: CMRSDKGPWN NPDIMKRVNN GDHICSKRSQ ADNAGENIIS QGNNSAVEEA PETDQSQPSP CQNVVVAHPA WNIPEAHKFS LSKRDVYAIQ EACKATNESG
401: RSPIFTGVMA FVMGVVTMIR VTKNVPRKLT ESTIYSSPVY CDENSMNKSS MHGKKMATTT ISGEDFMAVM KRMAELEQKV TNLSAQPATM PPEKEEMLNA
501: AISRADFLEQ ELAATKKALD DSLTRQEDLV AYVERKKKKK KLVRFQINAY LTNFCFGV
Arabidopsis Description
SFH10Phosphatidylinositol/phosphatidylcholine transfer protein SFH10 [Source:UniProtKB/Swiss-Prot;Acc:Q9SI13]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.