CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG99658	Soybean	cytosol, nucleus, plastid	12.79	100.0
KRG99659	Soybean	cytosol, nucleus, plastid	12.79	100.0
KRG99755	Soybean	endoplasmic reticulum	32.83	99.49
KRG99756	Soybean	cytosol	61.78	95.32
KRG99773	Soybean	cytosol, nucleus, plastid	93.43	93.43
VIT_07s0005g06640.t01	Wine grape	endoplasmic reticulum	63.64	61.87
Solyc09g060090.2.1	Tomato	cytosol	56.9	57.0
PGSC0003DMT400045517	Potato	cytosol	56.73	56.83
AT3G24840.3	Thale cress	cytosol	54.21	55.52
CDY52084	Canola	cytosol	52.53	53.15
GSMUA_Achr9P01730_001	Banana	plastid	30.13	51.88
CDX77382	Canola	cytosol	52.69	50.57
Bra015089.1-P	Field mustard	cytosol	42.76	47.48
KRH28724	Soybean	plastid	37.88	46.58
KRH76738	Soybean	plastid	37.71	46.57
KRH24439	Soybean	plastid	25.42	46.04
KRH45371	Soybean	cytosol	33.33	45.0
KRH61132	Soybean	cytosol	42.76	42.91
KRH51809	Soybean	nucleus	42.59	42.74
KRH51503	Soybean	cytosol	41.08	42.58
KRH62508	Soybean	cytosol	44.44	42.58
KRH56402	Soybean	cytosol	44.28	42.42
KRH29420	Soybean	cytosol, nucleus, plastid	39.9	42.1
KRH60806	Soybean	cytosol	40.24	41.78
KRH07662	Soybean	cytosol	43.43	41.68
KRH15161	Soybean	cytosol	43.94	41.43
GSMUA_Achr6P06610_001	Banana	mitochondrion	30.3	41.38
KRH60804	Soybean	cytosol	42.93	40.87
KRH29416	Soybean	cytosol	43.27	40.86
KRH05860	Soybean	cytosol	42.93	40.8
KRH69861	Soybean	plastid	38.05	40.72
KRH08168	Soybean	plastid	38.05	40.72
KRH24438	Soybean	cytosol	43.1	40.7
KRH51499	Soybean	cytosol	42.26	39.16
KRH77370	Soybean	cytosol	30.3	38.88
KRH28067	Soybean	cytosol	29.12	37.61
KRH01941	Soybean	cytosol	14.31	26.23
KRH51210	Soybean	cytosol	14.31	26.15
KRH36621	Soybean	cytosol	14.31	25.84
KRH11617	Soybean	cytosol	14.14	25.53
KRH14208	Soybean	cytosol	13.3	24.53
KRH65859	Soybean	cytosol	5.72	23.78
KRH46410	Soybean	cytosol	13.47	23.67
KRH73923	Soybean	cytosol	8.25	23.33
KRG82898	Soybean	cytosol	7.24	22.87
KRH75081	Soybean	extracellular, mitochondrion	4.71	22.76
KRH46406	Soybean	cytosol	9.6	22.01
KRG98457	Soybean	cytosol	13.97	20.24
KRH46400	Soybean	cytosol	8.92	19.7
KRG82897	Soybean	cytosol	2.86	15.6

Protein Annotations

Gene3D:1.10.8.20	EntrezGene:100780520	Gene3D:3.40.525.10	MapMan:35.1	EMBL:ACUP02005354	InterPro:CRAL-TRIO_dom
InterPro:CRAL-TRIO_dom_sf	InterPro:CRAL/TRIO_N_dom	InterPro:CRAL/TRIO_N_dom_sf	EnsemblPlantsGene:GLYMA_08G352800	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	InterPro:IPR001251	InterPro:IPR036865	UniProt:K7LAR3	EnsemblPlants:KRH46724	ProteinID:KRH46724
ProteinID:KRH46724.1	ProteinID:KRH46725.1	ProteinID:KRH46726.1	ProteinID:KRH46727.1	PFAM:PF00650	PFAM:PF03765
PFscan:PS50191	PANTHER:PTHR23324	PANTHER:PTHR23324:SF100	SMART:SM00516	SMART:SM01100	SUPFAM:SSF46938
SUPFAM:SSF52087	TMHMM:TMhelix	UniParc:UPI00029640F0	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr8:-:46595288..46603445

Molecular Weight (calculated)

67418.5 Da

IEP (calculated)

8.379

GRAVY (calculated)

-0.521

Length

594 amino acids

Sequence
(BLAST)

001: MPGEEVLAQE DERGRCFEPE TSEDEWRKSR ARSLRRKAMT ASTRLAYSLR KRNTRVANSD FASIFIEDVR DANEEKAVNS FRQVLLTRDL LPDSHDDYHE
101: MLRFLKARKF DIDKTVQMWA DMLHWRKEYG VDSILQEFVY KEYEEVQCYY PHGYHGVDKE GQPVYIERLG KVEPSKLMSV TTVDRFLKYH VQGFEKMFKE
201: KFPACSIAAK RHIDKTTTIL DVHGVNWVSF SKVAHDLVMR MQKIDGDNYP ETLNQMFIVN AGSGFKLLWN TAKGFLDPMT TAKIHVLGNK FQSRLLQIID
301: SSQLPDFLGG SCSCPNDGGC LRSDKGPWND PDILKLLHSR EAMKLTKFGS SSVADGVDVK SYASKVKSTG ISEPLSASEV RLNPSAFVQS VPSSEKKRMR
401: DSAPTGNVLE PLNAAREVVG DVDSISDSNN NHLRRLQEKP IPYIISILAQ IAVKLLTCIY VVFAALGKCF VVRSVDNQPR SHEKTKSAQS NSEEQLMTPA
501: IKEPLWQRIQ NLEAVVTEMA NKPNTIPPEK EDILQESLSR IKCIEYDLQK TKKALLATAS KQVELAESLE SLKESKFDGR NSCWPKNRSY APGR

Best Arabidopsis Sequence Match ( AT3G24840.1 )
(BLAST)

001: MPALGEILLV PETDKGKSKD YIEVSEDEKI TRTRSRSLKK KAIKASNKLT HSLRKRGKRV ADQYAPIVIE DVRDEEEEKA VNVFRKALVS LDLLPPRHDD
101: YHTMLRFLKA RRFDLEKTVQ MWEEMLKWRK ENGVDTIIQD FVYDEYEEVQ QYYPHGYHGV DREGRPVYIE RLGKIDPGKL MKVTTLERFL RYHVQGFEKT
201: FSEKFPACSI AAKRHINSST TIIDVHGVSW MSFRKLAQDL VMRMQKIDGD NYPETLNQMY IINAGNGFKL VWNTVKGFLD PKTTSKIHVL GNKYRSHLLE
301: IIDPSELPEF LGGNCKCAHE GGCMRFNKGP WNDPEIMKLV RSRDAMYKPK EMGLLENGEV AKLFSLRHVN TDMSSPDGGH VRERESHPEH DKRAQLSNQA
401: EAVGVGRMEQ SDSTSPLPNN LAVERSLTTS LQKVASFLAR FILQLLGSLC LMFRILGRLV NKQPENQLRP ELSVSVSQQQ VPPPQVHPCW LRLQNLETMV
501: TVLCDKPSSI PQEKEDILRD SLDRIKSIEQ DLQKTKKALF LTASKQIELA ECFENLKESS STGMRSCWPR HCRNFQAET

Arabidopsis Description

Sec14p-like phosphatidylinositol transfer family protein [Source:UniProtKB/TrEMBL;Acc:A0A178VMA9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.