Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH51503 | Soybean | cytosol | 93.71 | 93.54 |
| KRH29420 | Soybean | cytosol, nucleus, plastid | 73.95 | 75.13 |
| KRH24439 | Soybean | plastid | 40.21 | 70.12 |
| AT2G21540.2 | Thale cress | cytosol, nucleus, vacuole | 62.59 | 65.33 |
| CDY15887 | Canola | cytosol | 61.54 | 64.12 |
| CDX99586 | Canola | cytosol | 61.54 | 64.0 |
| Bra030294.1-P | Field mustard | cytosol, nucleus, plastid | 53.15 | 62.3 |
| KRH76738 | Soybean | plastid | 52.1 | 61.95 |
| KRH28724 | Soybean | plastid | 52.1 | 61.7 |
| PGSC0003DMT400043532 | Potato | cytosol | 59.79 | 61.4 |
| CDY12126 | Canola | cytosol | 57.17 | 61.12 |
| PGSC0003DMT400001903 | Potato | cytosol, nucleus, plastid | 60.84 | 60.63 |
| Bra010699.1-P | Field mustard | cytosol | 56.82 | 60.52 |
| CDX90317 | Canola | cytosol | 56.64 | 60.34 |
| Solyc01g109860.2.1 | Tomato | cytosol, nucleus, plastid | 60.49 | 60.28 |
| Solyc10g053900.1.1 | Tomato | cytosol, plastid | 59.27 | 59.58 |
| KRH69861 | Soybean | plastid | 57.52 | 59.28 |
| AT4G39180.1 | Thale cress | cytosol | 57.17 | 59.03 |
| KRH08168 | Soybean | plastid | 56.99 | 58.74 |
| CDX75444 | Canola | cytosol | 54.55 | 58.43 |
| Bra034638.1-P | Field mustard | cytosol | 55.42 | 58.27 |
| CDX69071 | Canola | cytosol | 54.2 | 58.05 |
| PGSC0003DMT400021690 | Potato | nucleus | 61.19 | 57.95 |
| AT4G34580.2 | Thale cress | cytosol | 55.94 | 57.76 |
| Solyc11g040280.1.1 | Tomato | cytosol | 60.31 | 57.69 |
| CDY45318 | Canola | cytosol, plastid | 49.65 | 56.8 |
| CDY17469 | Canola | cytosol | 55.77 | 55.87 |
| Bra011544.1-P | Field mustard | cytosol, plastid | 48.08 | 55.56 |
| Bra017663.1-P | Field mustard | cytosol, plastid | 44.06 | 55.26 |
| GSMUA_Achr5P23630_001 | Banana | cytosol | 56.99 | 54.15 |
| GSMUA_Achr6P03210_001 | Banana | cytosol | 56.12 | 54.04 |
| CDX76291 | Canola | cytosol | 55.77 | 53.89 |
| CDX89709 | Canola | cytosol, mitochondrion | 42.83 | 53.85 |
| AT2G16380.1 | Thale cress | cytosol | 50.52 | 52.83 |
| TraesCS2A01G327200.2 | Wheat | nucleus | 52.97 | 51.27 |
| Os10t0122600-01 | Rice | cytosol, nucleus, plastid | 53.5 | 51.17 |
| Os02t0440900-00 | Rice | cytosol | 53.5 | 51.17 |
| HORVU2Hr1G082530.1 | Barley | cytosol | 51.75 | 51.12 |
| TraesCS2B01G354800.2 | Wheat | nucleus | 52.8 | 51.1 |
| TraesCS2D01G335700.2 | Wheat | nucleus | 52.62 | 50.93 |
| KRH29416 | Soybean | cytosol | 55.59 | 50.56 |
| OQU84321 | Sorghum | cytosol | 49.65 | 50.35 |
| KRH24438 | Soybean | cytosol | 55.24 | 50.24 |
| GSMUA_Achr2P14280_001 | Banana | cytosol, nucleus, plastid | 57.87 | 50.15 |
| KRH60804 | Soybean | cytosol | 54.37 | 49.84 |
| OQU85018 | Sorghum | nucleus | 52.97 | 49.43 |
| Zm00001d016601_P006 | Maize | cytosol | 52.27 | 49.42 |
| KRH51809 | Soybean | nucleus | 50.7 | 48.99 |
| KRH05860 | Soybean | cytosol | 52.8 | 48.32 |
| KRH61132 | Soybean | cytosol | 50.0 | 48.31 |
| KRH15161 | Soybean | cytosol | 53.15 | 48.25 |
| KRG99756 | Soybean | cytosol | 32.34 | 48.05 |
| KRH51499 | Soybean | cytosol | 53.85 | 48.05 |
| TraesCS6B01G125700.1 | Wheat | plastid | 51.57 | 47.97 |
| TraesCS6A01G097200.1 | Wheat | plastid | 51.22 | 47.8 |
| TraesCS6D01G085200.1 | Wheat | plastid | 50.87 | 47.32 |
| Os02t0133200-01 | Rice | plasma membrane | 51.75 | 46.84 |
| HORVU6Hr1G017580.5 | Barley | plastid | 51.05 | 46.5 |
| Zm00001d015175_P002 | Maize | plastid | 51.4 | 45.58 |
| KRH45371 | Soybean | cytosol | 31.12 | 40.45 |
| KRH46724 | Soybean | cytosol, nucleus, plastid | 41.78 | 40.24 |
| KRG99773 | Soybean | cytosol, nucleus, plastid | 41.78 | 40.24 |
| KRH62508 | Soybean | cytosol | 40.56 | 37.42 |
| KRH77370 | Soybean | cytosol | 30.07 | 37.15 |
| KRH07662 | Soybean | cytosol | 40.03 | 37.0 |
| KRH56402 | Soybean | cytosol | 39.86 | 36.77 |
| KRH28067 | Soybean | cytosol | 29.55 | 36.74 |
| KRG99658 | Soybean | cytosol, nucleus, plastid | 3.85 | 28.95 |
| KRG99659 | Soybean | cytosol, nucleus, plastid | 3.85 | 28.95 |
| KRH01941 | Soybean | cytosol | 15.56 | 27.47 |
| KRH51210 | Soybean | cytosol | 15.56 | 27.38 |
| KRH11617 | Soybean | cytosol | 15.04 | 26.14 |
| KRH36621 | Soybean | cytosol | 15.04 | 26.14 |
| KRH73923 | Soybean | cytosol | 9.27 | 25.24 |
| KRH14208 | Soybean | cytosol | 13.81 | 24.53 |
| KRH46410 | Soybean | cytosol | 14.16 | 23.96 |
| KRH65859 | Soybean | cytosol | 5.94 | 23.78 |
| KRH75081 | Soybean | extracellular, mitochondrion | 5.07 | 23.58 |
| KRG82898 | Soybean | cytosol | 7.69 | 23.4 |
| KRH46406 | Soybean | cytosol | 10.49 | 23.17 |
| KRH46400 | Soybean | cytosol | 9.97 | 21.19 |
| CDY02262 | Canola | cytosol, plastid | 50.17 | 19.92 |
| KRG98457 | Soybean | cytosol | 14.16 | 19.76 |
| Bra013077.1-P | Field mustard | cytosol, plastid | 50.17 | 19.67 |
| KRG99755 | Soybean | endoplasmic reticulum | 6.29 | 18.37 |
| KRG82897 | Soybean | cytosol | 3.32 | 17.43 |
Protein Annotations
| Gene3D:1.10.8.20 | Gene3D:3.40.525.10 | MapMan:35.1 | UniProt:A0A0R0K240 | EMBL:ACUP02002140 | InterPro:CRAL-TRIO_dom |
| InterPro:CRAL-TRIO_dom_sf | InterPro:CRAL/TRIO_N_dom | InterPro:CRAL/TRIO_N_dom_sf | ncoils:Coil | EnsemblPlantsGene:GLYMA_04G010600 | GO:GO:0003674 |
| GO:GO:0005215 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0006810 | GO:GO:0008150 |
| GO:GO:0016020 | GO:GO:0016021 | InterPro:IPR001251 | InterPro:IPR036865 | ProteinID:KRH60805.1 | EnsemblPlants:KRH60806 |
| ProteinID:KRH60806 | ProteinID:KRH60806.1 | ProteinID:KRH60807.1 | ProteinID:KRH60808.1 | PFAM:PF00650 | PFAM:PF03765 |
| PRINTS:PR00180 | PFscan:PS50191 | PANTHER:PTHR23324 | PANTHER:PTHR23324:SF144 | SMART:SM00516 | SMART:SM01100 |
| SUPFAM:SSF46938 | SUPFAM:SSF52087 | TMHMM:TMhelix | UniParc:UPI00023C1CC3 | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr4:-:837361..842109
Molecular Weight (calculated)
65102.8 Da
IEP (calculated)
8.394
GRAVY (calculated)
-0.465
Length
572 amino acids
Sequence
(BLAST)
(BLAST)
001: MTDIMSAPVD LPMKLGHEIE YSEDERKKKL GSFKKVAISA SSKFKHSFAK RGRRHSRVMS VSIEDDLDAE ELQAVDAFRQ ALILEELLPA KHDDHHMMLR
101: FLRARKFDIE KTKQMWADML KWRQEFGADT IMEDFEFNEL EEVLKYYPQG HHGIDKDGRP VYIEKLGQVD SIKLMQVTTM ERYLKYHVRE FERTFAVKLP
201: ACSISAKKHI DQSTTLLDVQ GVGLKSLNKA ARDLLQRLQK IDGDNYPESL NRMFIINAGS GFRLLWNSIK SFLDPKTTSK IHVLGNKYQR KLLEIIDASE
301: LPEFLGGTCT CADKGGCMLS DKGPWNDPDI LKMVHNGEGK CKRKTLSGIE EKTIIEDGTA HQNVGNKESF PETYDVDEQC LSPKKQCAVY KYDAFVPVLG
401: KPVDSSWNKL TQKDKDALSK DCFPSKTCDG YSNHFVGGIM AIVMGIVTVI RLTRNMPRKI TEAIVYGSSS GYYDGTMMKA PTISCNDYMA VMKRMAELEE
501: KVTVLSMRPV IPHEKEEVLN NALCRVTTLE QDLVATKKAL DDALARQVEL QAQIDKKKNS NKKLFRFRCF AT
101: FLRARKFDIE KTKQMWADML KWRQEFGADT IMEDFEFNEL EEVLKYYPQG HHGIDKDGRP VYIEKLGQVD SIKLMQVTTM ERYLKYHVRE FERTFAVKLP
201: ACSISAKKHI DQSTTLLDVQ GVGLKSLNKA ARDLLQRLQK IDGDNYPESL NRMFIINAGS GFRLLWNSIK SFLDPKTTSK IHVLGNKYQR KLLEIIDASE
301: LPEFLGGTCT CADKGGCMLS DKGPWNDPDI LKMVHNGEGK CKRKTLSGIE EKTIIEDGTA HQNVGNKESF PETYDVDEQC LSPKKQCAVY KYDAFVPVLG
401: KPVDSSWNKL TQKDKDALSK DCFPSKTCDG YSNHFVGGIM AIVMGIVTVI RLTRNMPRKI TEAIVYGSSS GYYDGTMMKA PTISCNDYMA VMKRMAELEE
501: KVTVLSMRPV IPHEKEEVLN NALCRVTTLE QDLVATKKAL DDALARQVEL QAQIDKKKNS NKKLFRFRCF AT
001: MTDTMSAHMD RHNKLDYDGS EDEKKTKLCS LKKKAINASN KFKHSFTKRT RRNSRVMSVS IVDDIDLEEL QAVDAFRQAL ILDELLPSKH DDHHMMLRFL
101: RARKFDLEKA KQMWTDMIHW RKEFGVDTIM EDFDFKEIDE VLKYYPQGYH GVDKDGRPVY IERLGQVDAT KLMQVTTIDR YVKYHVREFE KTFNIKLPAC
201: SIAAKKHIDQ STTILDVQGV GLKSFSKAAR DLLQRIQKID SDNYPETLNR MFIINAGSGF RLLWSTVKSF LDPKTTAKIH VLGNKYQSKL LEIIDSNELP
301: EFLGGNCTCA DKGGCMRSDK GPWNDPDIFK MVQNGEGKCP RKTLSNIEEK TISVDENTTM KSDSFAKNKF DAENTKFIPM IDKTVNASTW PTNLHKSNYP
401: EPEDLYSAVK PSQRRGGEGY LFGGVMSLVM GLMTVVRLTK NMPRKLTEAA IYGGEVDKAE TTMVSNQEYM SMVKRMAELE EKCRSLDNQP AAFSPEKEQI
501: LTAALSRVDE LELQLAQTKK TLEETMATQH VIMAYIDKKK KKKKFFGF
101: RARKFDLEKA KQMWTDMIHW RKEFGVDTIM EDFDFKEIDE VLKYYPQGYH GVDKDGRPVY IERLGQVDAT KLMQVTTIDR YVKYHVREFE KTFNIKLPAC
201: SIAAKKHIDQ STTILDVQGV GLKSFSKAAR DLLQRIQKID SDNYPETLNR MFIINAGSGF RLLWSTVKSF LDPKTTAKIH VLGNKYQSKL LEIIDSNELP
301: EFLGGNCTCA DKGGCMRSDK GPWNDPDIFK MVQNGEGKCP RKTLSNIEEK TISVDENTTM KSDSFAKNKF DAENTKFIPM IDKTVNASTW PTNLHKSNYP
401: EPEDLYSAVK PSQRRGGEGY LFGGVMSLVM GLMTVVRLTK NMPRKLTEAA IYGGEVDKAE TTMVSNQEYM SMVKRMAELE EKCRSLDNQP AAFSPEKEQI
501: LTAALSRVDE LELQLAQTKK TLEETMATQH VIMAYIDKKK KKKKFFGF
Arabidopsis Description
SFH3Phosphatidylinositol/phosphatidylcholine transfer protein SFH3 [Source:UniProtKB/Swiss-Prot;Acc:Q93ZE9]
SUBAcon: [cytosol,nucleus,vacuole]
SUBAcon: [cytosol,nucleus,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.