Factsheet for Bra011544.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 3
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX69071	Canola	cytosol	97.37	90.26
Bra017663.1-P	Field mustard	cytosol, plastid	74.75	81.14
Bra034638.1-P	Field mustard	cytosol	89.09	81.07
AT4G34580.2	Thale cress	cytosol	90.1	80.51
Bra030294.1-P	Field mustard	cytosol, nucleus, plastid	58.99	59.84
Bra030295.1-P	Field mustard	cytosol	30.51	53.36
Bra010699.1-P	Field mustard	cytosol	55.35	51.02
KRH51503	Soybean	cytosol	57.17	49.39
PGSC0003DMT400043532	Potato	cytosol	54.95	48.83
KRH29420	Soybean	cytosol, nucleus, plastid	55.35	48.67
PGSC0003DMT400001903	Potato	cytosol, nucleus, plastid	55.96	48.26
KRH60806	Soybean	cytosol	55.56	48.08
Solyc10g053900.1.1	Tomato	cytosol, plastid	55.15	47.98
Solyc01g109860.2.1	Tomato	cytosol, nucleus, plastid	55.35	47.74
KRH24439	Soybean	plastid	31.31	47.26
Solyc11g040280.1.1	Tomato	cytosol	56.16	46.49
PGSC0003DMT400021690	Potato	nucleus	56.57	46.36
HORVU2Hr1G082530.1	Barley	cytosol	54.14	46.29
OQU84321	Sorghum	cytosol	52.73	46.28
TraesCS2A01G327200.2	Wheat	nucleus	54.95	46.02
TraesCS2D01G335700.2	Wheat	nucleus	54.95	46.02
TraesCS2B01G354800.2	Wheat	nucleus	54.55	45.69
GSMUA_Achr5P23630_001	Banana	cytosol	54.95	45.18
Os02t0440900-00	Rice	cytosol	54.14	44.82
GSMUA_Achr6P03210_001	Banana	cytosol	53.54	44.61
Os10t0122600-01	Rice	cytosol, nucleus, plastid	53.74	44.48
Zm00001d016601_P006	Maize	cytosol	54.34	44.46
OQU85018	Sorghum	nucleus	54.75	44.21
Bra010700.1-P	Field mustard	cytosol	53.33	42.72
Zm00001d015175_P002	Maize	plastid	53.94	41.4
Os02t0133200-01	Rice	plasma membrane	52.73	41.3
TraesCS6A01G097200.1	Wheat	plastid	51.11	41.27
GSMUA_Achr2P14280_001	Banana	cytosol, nucleus, plastid	54.95	41.21
TraesCS6D01G085200.1	Wheat	plastid	50.91	40.98
TraesCS6B01G125700.1	Wheat	plastid	50.51	40.65
HORVU6Hr1G017580.5	Barley	plastid	51.52	40.61
Bra031196.1-P	Field mustard	cytosol	51.31	40.19
Bra025754.1-P	Field mustard	nucleus	47.47	38.52
Bra003757.1-P	Field mustard	cytosol	45.86	35.92
Bra024938.1-P	Field mustard	cytosol	27.88	34.33
Bra002841.1-P	Field mustard	cytosol	35.15	33.27
Bra030841.1-P	Field mustard	nucleus	37.17	30.72
Bra015089.1-P	Field mustard	cytosol	30.91	28.6
Bra013077.1-P	Field mustard	cytosol, plastid	69.09	23.44
Bra028944.1-P	Field mustard	plastid	30.71	21.84
Bra022153.1-P	Field mustard	cytosol	13.54	20.24
Bra038021.1-P	Field mustard	cytosol	13.13	19.88
Bra024920.1-P	Field mustard	cytosol	13.13	19.46
Bra030831.1-P	Field mustard	cytosol	12.73	19.38
Bra017468.1-P	Field mustard	cytosol	12.73	18.92
Bra038012.1-P	Field mustard	cytosol	37.17	17.39
Bra002840.1-P	Field mustard	cytosol	0.0	0.0

Protein Annotations

Gene3D:1.10.8.20	Gene3D:3.40.525.10	MapMan:35.1	EnsemblPlantsGene:Bra011544	EnsemblPlants:Bra011544.1	EnsemblPlants:Bra011544.1-P
InterPro:CRAL-TRIO_dom	InterPro:CRAL-TRIO_dom_sf	InterPro:CRAL/TRIO_N_dom	InterPro:CRAL/TRIO_N_dom_sf	ncoils:Coil	InterPro:IPR001251
InterPro:IPR036865	UniProt:M4D4Y7	PFAM:PF00650	PFAM:PF03765	PRINTS:PR00180	PFscan:PS50191
PANTHER:PTHR23324	PANTHER:PTHR23324:SF77	SMART:SM00516	SMART:SM01100	SUPFAM:SSF46938	SUPFAM:SSF52087
UniParc:UPI00025456FB	SEG:seg	:	:	:	:

Description

AT4G34580 (E=7e-126) COW1, SRH1 | COW1 (CAN OF WORMS1); phosphatidylinositol transporter/ transporter

Coordinates

chrA01:-:1745320..1748531

Molecular Weight (calculated)

56770.8 Da

IEP (calculated)

9.130

GRAVY (calculated)

-0.492

Length

495 amino acids

Sequence
(BLAST)

001: MSSLKKKAIN ASNRFKNSFS KKGRKSSSKV MCVTIEDDID AEDLQSLDAF RQALVLDELL PSNLDDLHMM LRFLRARKFD IEKAKQMWSD MIQWRKDFGA
101: DKIIEEFEFE EIDEVMKHYP QGYHGVDKEG RPVYIERLGQ IDANKLLQVT TMDRYVKYHV REFEKTFKIK FPACSVAAKK HIDQSTTILD VQGVGLKNFS
201: KSARELLQRL LKIDNDNYPE TLNRMFIINA GSGFRLLWST VKSFLDPKTT AKIHVLGNKY HSKLLEMAIN RESKCSPISE DDLKHVDQGR STSFQESLDR
301: SSKQMVEDNV HEKQVATIDK SMMEWPTKTQ KIENFPVSKG LECYVRKGAP KKGDGLLVGG VMAFVMGIVA MVRLSKDVPR KLTEAALYGN SVCYDEAMPK
401: QNQAQFAAPV SSSEYMLMVK RMAELEEKCM FLDLKPANVD TETEEKLQAA LNRVQVLEQE LTETKKALEE TLVGQKEILA YIEKKKKKKK LFFGF

Best Arabidopsis Sequence Match ( AT4G34580.1 )
(BLAST)

001: MAETKPEIEM SEEERKIVKI SSLKKKAINA SNRFKNSFKK KGRRSSSRVM SVPIEDDIDA EDLQALDAFR QALILDELLP SKLDDLHMML RFLRARKFDI
101: EKAKQMWSDM IQWRKDFGAD TIIEDFDFEE IDEVMKHYPQ GYHGVDKEGR PVYIERLGQI DANKLLQVTT MDRYVKYHVK EFEKTFKVKF PSCSVAANKH
201: IDQSTTILDV QGVGLKNFSK SARELLQRLC KIDNENYPET LNRMFIINAG SGFRLLWSTV KSFLDPKTTA KIHVLGNKYH SKLLEVIDAS ELPEFFGGAC
301: TCEDKGGCMR SDKGPWNDPE VLKIAINREA KCSPISEDEH KHVDQGRSTS GFESLERIKK KTDEDNVYEK QIATIDKSMD MAWLAKTQKA ENFPISKGLE
401: CYVRKGAPKK GDGLLVGGVM AFVMGIVAMV RLSKDVPRKL TEAALYGNSV CYEESTKSKQ NQGQFAAPVS SSEYMLMVKR MAELEDKCMF LDLKPAHVES
501: EKEEKLQAAL NRVQVLEQEL TETKKALEEA LVSQKEILAY IEKKKKKKKL FFGF

Arabidopsis Description

SFH1SRH1 [Source:UniProtKB/TrEMBL;Acc:A0A178V672]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.