Factsheet for Bra017663.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 3
cytosol 4
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY45318	Canola	cytosol, plastid	99.78	91.0
Bra011544.1-P	Field mustard	cytosol, plastid	81.14	74.75
Bra034638.1-P	Field mustard	cytosol	84.87	71.14
AT4G34580.2	Thale cress	cytosol	83.99	69.13
Bra030294.1-P	Field mustard	cytosol, nucleus, plastid	57.02	53.28
Bra030295.1-P	Field mustard	cytosol	32.02	51.59
KRH24439	Soybean	plastid	33.33	46.34
Bra010699.1-P	Field mustard	cytosol	53.51	45.44
KRH51503	Soybean	cytosol	56.36	44.85
PGSC0003DMT400043532	Potato	cytosol	53.95	44.17
KRH60806	Soybean	cytosol	55.26	44.06
KRH29420	Soybean	cytosol, nucleus, plastid	53.73	43.52
Solyc10g053900.1.1	Tomato	cytosol, plastid	53.95	43.23
PGSC0003DMT400001903	Potato	cytosol, nucleus, plastid	53.51	42.51
Solyc01g109860.2.1	Tomato	cytosol, nucleus, plastid	53.07	42.16
PGSC0003DMT400021690	Potato	nucleus	55.7	42.05
HORVU2Hr1G082530.1	Barley	cytosol	53.07	41.8
Solyc11g040280.1.1	Tomato	cytosol	54.61	41.64
TraesCS2D01G335700.2	Wheat	nucleus	53.29	41.12
TraesCS2A01G327200.2	Wheat	nucleus	52.85	40.78
TraesCS2B01G354800.2	Wheat	nucleus	52.85	40.78
GSMUA_Achr5P23630_001	Banana	cytosol	53.51	40.53
GSMUA_Achr6P03210_001	Banana	cytosol	52.41	40.24
OQU84321	Sorghum	cytosol	49.56	40.07
Zm00001d016601_P006	Maize	cytosol	53.07	40.0
Os02t0440900-00	Rice	cytosol	51.97	39.63
Os10t0122600-01	Rice	cytosol, nucleus, plastid	51.75	39.46
OQU85018	Sorghum	nucleus	52.85	39.31
Bra010700.1-P	Field mustard	cytosol	51.75	38.19
GSMUA_Achr2P14280_001	Banana	cytosol, nucleus, plastid	53.29	36.82
TraesCS6A01G097200.1	Wheat	plastid	49.12	36.54
TraesCS6D01G085200.1	Wheat	plastid	49.12	36.42
Os02t0133200-01	Rice	plasma membrane	50.44	36.39
HORVU6Hr1G017580.5	Barley	plastid	49.78	36.15
TraesCS6B01G125700.1	Wheat	plastid	48.68	36.1
Zm00001d015175_P002	Maize	plastid	50.66	35.81
Bra031196.1-P	Field mustard	cytosol	48.9	35.28
Bra025754.1-P	Field mustard	nucleus	45.83	34.26
Bra003757.1-P	Field mustard	cytosol	44.52	32.12
Bra024938.1-P	Field mustard	cytosol	27.19	30.85
Bra002841.1-P	Field mustard	cytosol	34.21	29.83
Bra030841.1-P	Field mustard	nucleus	37.72	28.71
Bra015089.1-P	Field mustard	cytosol	29.82	25.42
Bra013077.1-P	Field mustard	cytosol, plastid	66.67	20.84
Bra028944.1-P	Field mustard	plastid	31.36	20.55
Bra024920.1-P	Field mustard	cytosol	13.82	18.86
Bra030831.1-P	Field mustard	cytosol	13.38	18.77
Bra022153.1-P	Field mustard	cytosol	13.6	18.73
Bra038021.1-P	Field mustard	cytosol	13.38	18.65
Bra017468.1-P	Field mustard	cytosol	13.38	18.32
Bra038012.1-P	Field mustard	cytosol	38.38	16.54
Bra002840.1-P	Field mustard	cytosol	0.0	0.0

Protein Annotations

Gene3D:1.10.8.20	Gene3D:3.40.525.10	MapMan:35.1	EnsemblPlantsGene:Bra017663	EnsemblPlants:Bra017663.1	EnsemblPlants:Bra017663.1-P
InterPro:CRAL-TRIO_dom	InterPro:CRAL-TRIO_dom_sf	InterPro:CRAL/TRIO_N_dom	InterPro:CRAL/TRIO_N_dom_sf	InterPro:IPR001251	InterPro:IPR036865
UniProt:M4DMD0	PFAM:PF00650	PFAM:PF03765	PRINTS:PR00180	PFscan:PS50191	PANTHER:PTHR23324
PANTHER:PTHR23324:SF77	SMART:SM00516	SMART:SM01100	SUPFAM:SSF46938	SUPFAM:SSF52087	UniParc:UPI000254127F
SEG:seg	:	:	:	:	:

Description

AT4G34580 (E=3e-129) COW1, SRH1 | COW1 (CAN OF WORMS1); phosphatidylinositol transporter/ transporter

Coordinates

chrA03:+:29589182..29591891

Molecular Weight (calculated)

52441.4 Da

IEP (calculated)

9.211

GRAVY (calculated)

-0.548

Length

456 amino acids

Sequence
(BLAST)

001: MGSLKKKALS ASNRFKNSIK KKGRRSRVMS VPIENDIDAE DLQSIDVFRQ VLVLDELLPY KLDDLHMMLR FLRARKFDIE KAKQMWKDMI QWRKDFGADT
101: IIEDFEFKEI DEVMKYYPQG YHGIDKEGRP VYIERLGQID ANKLLQVTTM DRYVKYHVKE FEKTFNIKFP ACSVAANKHI DQSTTIFDVQ GVGMKNFSKS
201: ARELLQSLLK IDNDNYHETL NRMFIINAGS GFRLLWSTVK SFLDPKTTAK IHVLGNKYHS KLLEMAINRE VKCAPISEDE HEHVDQGRSI SVPKSVERYN
301: KKKDEDNAQE EQITTIDKSM DMSRYQKAEN DPLSKGLECY VRKGAPNKGG GSLVGGVMAF VMEIVAMVRL SKDVPHKLTE AAIYGNSVCY EESRSKKTKV
401: QFATPVSSSE YMLMTKRMAE LEEKWMSLDL KPANIESEKE EKLQAALTVF KCLSKS

Best Arabidopsis Sequence Match ( AT4G34580.1 )
(BLAST)

001: MAETKPEIEM SEEERKIVKI SSLKKKAINA SNRFKNSFKK KGRRSSSRVM SVPIEDDIDA EDLQALDAFR QALILDELLP SKLDDLHMML RFLRARKFDI
101: EKAKQMWSDM IQWRKDFGAD TIIEDFDFEE IDEVMKHYPQ GYHGVDKEGR PVYIERLGQI DANKLLQVTT MDRYVKYHVK EFEKTFKVKF PSCSVAANKH
201: IDQSTTILDV QGVGLKNFSK SARELLQRLC KIDNENYPET LNRMFIINAG SGFRLLWSTV KSFLDPKTTA KIHVLGNKYH SKLLEVIDAS ELPEFFGGAC
301: TCEDKGGCMR SDKGPWNDPE VLKIAINREA KCSPISEDEH KHVDQGRSTS GFESLERIKK KTDEDNVYEK QIATIDKSMD MAWLAKTQKA ENFPISKGLE
401: CYVRKGAPKK GDGLLVGGVM AFVMGIVAMV RLSKDVPRKL TEAALYGNSV CYEESTKSKQ NQGQFAAPVS SSEYMLMVKR MAELEDKCMF LDLKPAHVES
501: EKEEKLQAAL NRVQVLEQEL TETKKALEEA LVSQKEILAY IEKKKKKKKL FFGF

Arabidopsis Description

SFH1SRH1 [Source:UniProtKB/TrEMBL;Acc:A0A178V672]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.