Factsheet for Bra028944.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
cytosol 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY36781	Canola	extracellular	23.85	98.81
CDY36780	Canola	plastid	72.7	88.77
Bra002840.1-P	Field mustard	cytosol	8.48	76.62
CDY11954	Canola	cytosol	20.55	73.33
Zm00001d039981_P001	Maize	cytosol	11.06	62.6
Bra002841.1-P	Field mustard	cytosol	46.55	61.95
AT5G56160.1	Thale cress	cytosol	47.7	57.54
Zm00001d031251_P001	Maize	cytosol, mitochondrion	10.06	54.26
HORVU1Hr1G088100.1	Barley	cytosol	12.21	52.8
HORVU7Hr1G037200.1	Barley	nucleus	13.79	44.86
HORVU7Hr1G040650.2	Barley	cytosol, nucleus, plastid	14.37	44.64
HORVU3Hr1G112740.3	Barley	nucleus	14.08	43.75
Bra030841.1-P	Field mustard	nucleus	33.62	39.07
Zm00001d043774_P001	Maize	cytosol	4.74	38.82
Bra030295.1-P	Field mustard	cytosol	15.23	37.46
Zm00001d012531_P001	Maize	mitochondrion	6.9	36.64
Bra030294.1-P	Field mustard	cytosol, nucleus, plastid	23.28	33.2
GSMUA_Achr4P09770_001	Banana	cytosol	21.41	32.68
GSMUA_Achr7P06190_001	Banana	cytosol	26.87	32.41
HORVU1Hr1G091860.1	Barley	cytosol	7.47	31.9
GSMUA_Achr3P11960_001	Banana	cytosol, plastid	27.59	31.48
Zm00001d045670_P001	Maize	cytosol	8.48	31.38
Bra017663.1-P	Field mustard	cytosol, plastid	20.55	31.36
EER96946	Sorghum	cytosol, nucleus, plastid	26.87	31.22
GSMUA_Achr3P04130_001	Banana	nucleus	27.73	30.98
KXG40069	Sorghum	nucleus	27.87	30.79
Bra011544.1-P	Field mustard	cytosol, plastid	21.84	30.71
GSMUA_Achr5P04200_001	Banana	plastid	27.3	30.4
Os08t0341700-01	Rice	nucleus	27.59	30.14
Os08t0497300-01	Rice	cytosol, plastid	26.15	30.13
Bra024938.1-P	Field mustard	cytosol	17.39	30.1
TraesCS6D01G265200.1	Wheat	cytosol	26.72	30.05
TraesCS6A01G284800.1	Wheat	cytosol	26.72	30.0
Bra010699.1-P	Field mustard	cytosol	23.13	29.98
HORVU6Hr1G071770.19	Barley	cytosol	26.58	29.94
TraesCS6B01G313500.1	Wheat	cytosol	26.58	29.89
Zm00001d005995_P003	Maize	nucleus	25.72	29.88
TraesCS7D01G238000.2	Wheat	cytosol	25.86	29.75
TraesCS2B01G533900.1	Wheat	nucleus	26.87	29.68
KXG30865	Sorghum	cytosol	26.29	29.66
Os09t0481100-01	Rice	nucleus	26.01	29.62
TraesCS2D01G506400.1	Wheat	nucleus	26.87	29.54
Bra015089.1-P	Field mustard	cytosol	22.7	29.53
OQU80990	Sorghum	cytosol	25.72	29.49
Zm00001d017876_P018	Maize	cytosol	26.01	29.34
Zm00001d035770_P002	Maize	cytosol, endoplasmic reticulum	12.5	29.29
Zm00001d051674_P037	Maize	cytosol	25.57	29.09
Os02t0721800-01	Rice	cytosol	25.43	28.92
HORVU7Hr1G048880.11	Barley	mitochondrion	26.72	28.75
GSMUA_Achr8P24430_001	Banana	endoplasmic reticulum	27.16	28.64
Bra010700.1-P	Field mustard	cytosol	25.0	28.16
Bra034638.1-P	Field mustard	cytosol	21.98	28.12
Zm00001d031316_P020	Maize	cytosol	25.86	27.91
TraesCS7A01G240000.3	Wheat	endoplasmic reticulum, plastid	26.58	27.57
Bra025754.1-P	Field mustard	nucleus	23.99	27.38
Bra031196.1-P	Field mustard	cytosol	24.57	27.06
TraesCS7B01G135600.2	Wheat	plastid	25.86	26.99
Zm00001d050131_P002	Maize	cytosol	24.57	26.76
Bra003757.1-P	Field mustard	cytosol	23.99	26.42
Zm00001d052840_P016	Maize	plastid	26.01	24.97
Bra038012.1-P	Field mustard	cytosol	37.64	24.76
Zm00001d037983_P001	Maize	cytosol	7.76	22.88
Bra038021.1-P	Field mustard	cytosol	8.91	18.96
Zm00001d008240_P001	Maize	cytosol, extracellular, mitochondrion, nucleus	5.32	18.69
Bra017468.1-P	Field mustard	cytosol	8.91	18.62
Zm00001d045718_P001	Maize	cytosol	6.75	18.58
Zm00001d010393_P001	Maize	plastid	9.63	18.41
Bra030831.1-P	Field mustard	cytosol	8.48	18.15
Bra024920.1-P	Field mustard	cytosol	8.48	17.66
Bra022153.1-P	Field mustard	cytosol	8.33	17.52
Bra013077.1-P	Field mustard	cytosol, plastid	23.13	11.04
Zm00001d014589_P001	Maize	cytosol	1.29	9.28
Zm00001d005778_P001	Maize	plastid	3.45	8.54
Zm00001d035370_P003	Maize	plastid	4.45	7.6
Zm00001d047488_P001	Maize	nucleus	1.58	6.88

Protein Annotations

Gene3D:1.10.8.20	MapMan:11.10.2.4.3	Gene3D:3.40.525.10	EnsemblPlantsGene:Bra028944	EnsemblPlants:Bra028944.1	EnsemblPlants:Bra028944.1-P
InterPro:CRAL-TRIO_dom	InterPro:CRAL-TRIO_dom_sf	InterPro:CRAL/TRIO_N_dom	InterPro:CRAL/TRIO_N_dom_sf	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	InterPro:IPR001251	InterPro:IPR036865	UniProt:M4EJH8	PFAM:PF00650	PFscan:PS50191
PANTHER:PTHR23324	PANTHER:PTHR23324:SF84	SMART:SM00516	SMART:SM01100	SUPFAM:SSF46938	SUPFAM:SSF52087
TMHMM:TMhelix	UniParc:UPI000253FDFB	SEG:seg	:	:	:

Description

AT5G56160 (E=3e-091) | transporter

Coordinates

chrA03:-:5535907..5540990

Molecular Weight (calculated)

78451.9 Da

IEP (calculated)

7.507

GRAVY (calculated)

-0.094

Length

696 amino acids

Sequence
(BLAST)

001: MSHSSSINLL HYHYLPPCLN HSSFRFCLTA PSSSRWSSPD DDICSIMAMP TTTLPGSMSP FNVPHSVGRG GCGHTIDKLS DSEDERSRIG SPAKKVISCS
101: IEDVRDENDE KIVLKLRQEL LNKHSLPPRH DDYHMLLRFL KTMDFNIDKT VTAWEEMLKW RNEFGADHII QDFNFNELDQ VTMYYPQGYH GVDKDGRPIY
201: IERLGKAHPG KLMDVTTIDR YLKYHVQEFE KALQQKLPAC SIAAKRRVTT TTTILDADGL GMKNFSPAAA NLLSSIAKVD CSYYPEVLNS LKITLSTLHR
301: MFIVNAGFGF RSLIWPAAQK FLDPVTIAKI QLVHHMEVNP IPQTTKAPLH VRDHDSQEPA QGECVVLRNC MFKCIIVTFY GGQISRFGVL REKTKGVNIV
401: HLVTILIAFP LKLYFDLFSF LLFGYWQRHN RVHVSDSSIN KEIVLQCLDR LKKLEKECTE ISRIPVKTPD ENEKLLTGTL ERIKSLELDL DKTQSVLHLT
501: LAKQLQITEQ LDSHYEEISS LLVQLQRIMS LKFVSGALFF CLLLTIFPSF SSSSFISDGV FGSQALVTGR NLLQTKKTCP VNFEFMNYTI ITSQCKGPKF
601: PVKECCSAFL DFACPYTEQL NDLSNDCATT MFSYINLYGQ YPPGLFANQC KGGKEGLECP AMSPASAADV NAAVNTASTP LWLTIFAALL VFVKLL

Best Arabidopsis Sequence Match ( AT5G56160.1 )
(BLAST)

001: MSGREQTGEK LSDSEYIEEE PRRSRIGNLK KKAFSCSTKL THPLKMRKGK RKIDFQIPLI EDVRDEKEEK LVSKLRQQLL QKDLLPPVHD DYHMLLRFLK
101: TMEFKIEKTV TAWEEMLKWR KEFGTDRIIQ DFNFKELDEV TRHYPQGYHG VDKDGRPIYI ERLGKAHPGK LMEVTTIERY LKYHVQEFER TLQEKLPACS
201: VAAKRRVTTT TTILDVEGLG MKNFTPTAAN LLATIAKVDC NYYPETLHRM FIVNAGIGFR SFLWPAAQKL LDPMTIAKIQ VLEPRSLSKL LEAIDSSQLP
301: EFLGGLCKCP NEGGCLRSNK GPWNDPEIVE LVHHMEVNNV PQTTTAPLHV RDYDSTTCTI SPKETLKEEP EPEEYYSSTG SRSSMHTCIV PPLSDKASTS
401: DGDKFITTVE SIESAQSQLL DADTENTFAN TSVREGGQIL RFGALREKIN SENIFHLVKI LLVFPLKLFV LFGFLLPGYW QRQNTVVVPD SSTNNKVLEC
501: FDRLKKMEKE FTEISRKQVK IPEANEKLLA ESLERIKSLE LDLDKTKSVL HITLTKQLQI TEQLESQDEE RRKGCCF

Arabidopsis Description

SFH14Phosphatidylinositol/phosphatidylcholine transfer protein SFH14 [Source:UniProtKB/Swiss-Prot;Acc:F4K6D3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.