Factsheet for Bra017468.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol, nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY41066	Canola	cytosol	98.5	98.5
CDY25949	Canola	cytosol	97.0	97.0
Bra022153.1-P	Field mustard	cytosol	90.09	90.63
Bra024920.1-P	Field mustard	cytosol	88.59	88.32
AT5G47730.1	Thale cress	cytosol	89.49	87.39
KRH51210	Soybean	cytosol	73.27	75.08
KRH01941	Soybean	cytosol	72.07	74.07
KRH11617	Soybean	cytosol	72.37	73.25
KRH36621	Soybean	cytosol	71.77	72.64
VIT_10s0116g00400.t01	Wine grape	cytosol	72.67	71.6
GSMUA_Achr3P12050_001	Banana	cytosol	69.07	68.86
GSMUA_Achr7P06060_001	Banana	cytosol	68.47	68.47
GSMUA_Achr1P19200_001	Banana	cytosol	66.37	65.58
GSMUA_Achr3P28070_001	Banana	cytosol	66.07	65.48
Solyc11g012790.1.1	Tomato	cytosol	66.07	65.09
EER90026	Sorghum	cytosol	63.96	64.55
PGSC0003DMT400034789	Potato	cytosol	65.47	64.5
GSMUA_Achr4P13090_001	Banana	cytosol	64.86	64.29
Os02t0200000-01	Rice	cytosol	63.06	64.22
TraesCS7A01G378400.1	Wheat	cytosol	62.46	64.0
TraesCS7B01G280200.2	Wheat	cytosol	62.16	63.69
TraesCS7D01G375200.1	Wheat	cytosol	62.16	63.69
TraesCS6A01G164200.1	Wheat	cytosol	62.46	63.61
TraesCS6B01G188100.1	Wheat	cytosol	62.46	63.61
TraesCS6D01G149100.1	Wheat	cytosol	62.46	63.61
Bra038021.1-P	Field mustard	cytosol	62.46	63.61
Bra030831.1-P	Field mustard	cytosol	61.86	63.38
Zm00001d015785_P001	Maize	extracellular	61.56	62.69
GSMUA_Achr1P09480_001	Banana	cytosol	62.76	62.39
EES04709	Sorghum	cytosol	60.96	62.08
HORVU7Hr1G090330.11	Barley	cytosol, nucleus, plastid	62.16	60.88
HORVU6Hr1G032510.1	Barley	cytosol, nucleus, peroxisome	62.16	60.17
Zm00001d046538_P003	Maize	cytosol	63.96	54.2
Zm00001d053648_P005	Maize	cytosol, endoplasmic reticulum, plastid	51.95	50.14
Os06t0607200-01	Rice	cytosol	20.72	47.59
Bra030295.1-P	Field mustard	cytosol	20.12	23.67
Bra024938.1-P	Field mustard	cytosol	23.12	19.15
Bra010699.1-P	Field mustard	cytosol	24.62	15.27
Bra030294.1-P	Field mustard	cytosol, nucleus, plastid	20.12	13.73
Bra034638.1-P	Field mustard	cytosol	22.22	13.6
Bra017663.1-P	Field mustard	cytosol, plastid	18.32	13.38
Bra025754.1-P	Field mustard	nucleus	24.32	13.28
Bra010700.1-P	Field mustard	cytosol	24.62	13.27
Bra031196.1-P	Field mustard	cytosol	24.92	13.13
Bra030841.1-P	Field mustard	nucleus	23.12	12.85
Bra011544.1-P	Field mustard	cytosol, plastid	18.92	12.73
Bra003757.1-P	Field mustard	cytosol	23.42	12.34
Bra002841.1-P	Field mustard	cytosol	19.22	12.24
Bra015089.1-P	Field mustard	cytosol	17.12	10.65
Bra028944.1-P	Field mustard	plastid	18.62	8.91
Bra038012.1-P	Field mustard	cytosol	24.92	7.84
Bra013077.1-P	Field mustard	cytosol, plastid	23.42	5.35
Bra002840.1-P	Field mustard	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:Bra017468.1	EnsemblPlants:Bra017468.1-P	EnsemblPlantsGene:Bra017468	Gene3D:3.40.525.10	InterPro:CRAL-TRIO_dom	InterPro:CRAL-TRIO_dom_sf
InterPro:CRAL/TRIO_N_dom	InterPro:CRAL/TRIO_N_dom_sf	InterPro:IPR001251	InterPro:IPR036865	PANTHER:PTHR23324	PANTHER:PTHR23324:SF140
PFAM:PF00650	PFAM:PF03765	PFscan:PS50191	SMART:SM00516	SMART:SM01100	SUPFAM:SSF46938
SUPFAM:SSF52087	UniParc:UPI00025423C3	UniProt:M4DLT7	MapMan:35.1	:	:

Description

AT5G47730 (E=2e-176) | SEC14 cytosolic factor, putative / polyphosphoinositide-binding protein, putative

Coordinates

chrA09:+:15645040..15646862

Molecular Weight (calculated)

37901.6 Da

IEP (calculated)

8.778

GRAVY (calculated)

-0.350

Length

333 amino acids

Sequence
(BLAST)

001: MGIVSEQAID DFQELIDKVE EPLKTTFKNV HQGYLRETLI RFLKARDWNV IKAHTMLVEC LRWRVDNQID SILSKPIVPS GLYRDVRDSQ LIGMSGYTRE
101: GLPVFAIGVG LSTFDKASVH YYVQSHIQIN EYRDRVLLPS VSKKNGRPIT TCVKVLDMTG LKLSALSQIK LVTIISTIDD LNYPEKTNTY YVVNAPYIFS
201: ACWKVVKPLL QERTRKKVHV LSGCGKDELL KIMDYTSLPH FCRRGSSGSS HQTQSVDCFS VDHPFHQQLY NYVKHHYETQ GQAEPAKQGS FHVGFPEPVA
301: ERVEIAKTIE SKLHKFENCN GLSKPVDDRK ASP

Best Arabidopsis Sequence Match ( AT5G47730.1 )
(BLAST)

001: MGIVSEEAID EFQELMDQVE EPLKKTYERV HQGYLRENLG RFLKARDWNV CKAHTMLVEC LRWRVDNEID SILSKPIVPT ELYRDVRDSQ LIGMSGYTKE
101: GLPVFAIGVG LSTFDKASVH YYVQSHIQIN EYRDRVLLPS ISKKNGRPIT TCVKVLDMTG LKLSALSQIK LVTIISTIDD LNYPEKTNTY YVVNAPYIFS
201: ACWKVVKPLL QERTRKKVHV LSGCGRDELL KIMDFTSLPH FCRSGSSGSS HHTQSANCFS INHPFHQQLY NYVKHHYETQ GQAEPAKQGS FHVGFPEPEA
301: ERCVIAKTIE SELHKFENRN GLAVSIDDRK SSHETLANGD L

Arabidopsis Description

At5g47730 [Source:UniProtKB/TrEMBL;Acc:Q9FIK6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.