Factsheet for GSMUA_Achr1P19200_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P06060_001	Banana	cytosol	83.09	84.08
GSMUA_Achr3P12050_001	Banana	cytosol	82.79	83.53
GSMUA_Achr3P28070_001	Banana	cytosol	75.67	75.89
VIT_19s0015g00760.t01	Wine grape	cytosol	73.29	73.08
GSMUA_Achr4P13090_001	Banana	cytosol	72.7	72.92
PGSC0003DMT400057025	Potato	cytosol	68.84	68.84
Solyc07g065700.2.1	Tomato	cytosol	37.39	68.48
KRH46406	Soybean	cytosol	51.63	67.18
KRG82898	Soybean	cytosol	37.39	67.02
KRH46410	Soybean	cytosol	66.77	66.57
Bra017468.1-P	Field mustard	cytosol	65.58	66.37
CDY41066	Canola	cytosol	65.28	66.07
CDY40544	Canola	cytosol	64.69	66.06
GSMUA_Achr1P09480_001	Banana	cytosol	65.28	65.67
CDY28908	Canola	cytosol	64.39	65.56
Bra022153.1-P	Field mustard	cytosol	64.39	65.56
CDY25949	Canola	cytosol	64.69	65.47
KRH14208	Soybean	cytosol	62.02	64.91
KRH73923	Soybean	cytosol	40.36	64.76
Bra024920.1-P	Field mustard	cytosol	63.8	64.37
AT5G47730.1	Thale cress	cytosol	64.99	64.22
CDX77792	Canola	cytosol	63.5	64.07
CDY17710	Canola	cytosol	63.2	63.77
KRH46400	Soybean	cytosol	47.18	59.11
KRH65859	Soybean	cytosol	23.74	55.94
KRG98457	Soybean	cytosol	66.17	54.39
KRH75081	Soybean	extracellular, mitochondrion	19.29	52.85
KRG82897	Soybean	cytosol	16.91	52.29
GSMUA_Achr9P01730_001	Banana	plastid	22.26	21.74
GSMUA_Achr3P28830_001	Banana	nucleus	16.32	20.75
GSMUA_AchrUn_...	Banana	mitochondrion	20.18	18.33
GSMUA_Achr6P06610_001	Banana	mitochondrion	22.85	17.7
GSMUA_Achr4P09770_001	Banana	cytosol	23.44	17.32
GSMUA_Achr10P...	Banana	cytosol	26.41	15.95
GSMUA_Achr7P06190_001	Banana	cytosol	26.71	15.6
GSMUA_Achr3P11960_001	Banana	cytosol, plastid	28.19	15.57
GSMUA_Achr6P03210_001	Banana	cytosol	27.3	15.49
GSMUA_Achr1P12050_001	Banana	cytosol	27.89	15.02
GSMUA_Achr5P23630_001	Banana	cytosol	26.71	14.95
GSMUA_Achr2P09690_001	Banana	cytosol	26.71	14.38
GSMUA_Achr9P22020_001	Banana	cytosol	26.71	14.26
GSMUA_Achr2P14280_001	Banana	cytosol, nucleus, plastid	27.6	14.09
GSMUA_Achr5P04200_001	Banana	plastid	25.82	13.92
GSMUA_Achr3P04130_001	Banana	nucleus	25.52	13.8
GSMUA_Achr1P25320_001	Banana	cytosol	25.52	13.15
GSMUA_Achr8P24430_001	Banana	endoplasmic reticulum	25.22	12.88
GSMUA_Achr3P28840_001	Banana	mitochondrion	11.28	10.33

Protein Annotations

EnsemblPlants:GSMUA_Achr1P19200_001	EnsemblPlants:GSMUA_Achr1T19200_001	EnsemblPlantsGene:GSMUA_Achr1G19200_001	Gene3D:3.40.525.10	InterPro:CRAL-TRIO_dom	InterPro:CRAL-TRIO_dom_sf
InterPro:CRAL/TRIO_N_dom	InterPro:CRAL/TRIO_N_dom_sf	InterPro:IPR001251	InterPro:IPR036865	PANTHER:PTHR23324	PANTHER:PTHR23324:SF140
PFAM:PF00650	PFAM:PF03765	PFscan:PS50191	SEG:seg	SMART:SM00516	SMART:SM01100
SUPFAM:SSF46938	SUPFAM:SSF52087	UniParc:UPI000296E863	UniProt:M0S178	MapMan:35.1	:

Description

CRAL/TRIO domain containing protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr1G19200_001]

Coordinates

chr1:-:14348121..14353709

Molecular Weight (calculated)

37705.6 Da

IEP (calculated)

8.469

GRAVY (calculated)

-0.198

Length

337 amino acids

Sequence
(BLAST)

001: MGIASQDAIK QFSALVAEVD ESLKAAFQNI HQGYPTETLV RFLKAREWSI PNAHKMLLDC LNWRIQNCID EILAKPIIPA DLYRGIRDSQ LVGLSGYTKD
101: GHPVFAIGVG LSTYDKASVN YYVQSHIQMN EYRDHVILPA STKKCGRHVA TCVKVLDMTG LKLSALCQIK LLTIISTIDD LNYPEKTETY YIVNAPCIFS
201: ACWKVVKPLL QERTRRKVQI LQGCGRDELL KIMDYASLPH FCKREGSGSS QHSSSGSDNC FSFDHHFHQQ LYSYIKQQAL GRELAAPLKQ GCFHVDVPEP
301: DPKGVNIVKT AIESQLHKIG DRNGLSRSLS GLKINIA

Best Arabidopsis Sequence Match ( AT1G55840.1 )
(BLAST)

001: MSITNEEAVK QLRALMEDVD DSLRESYRNI HQGYPTENLL RFLKARDGNV QKAHKMLLEC LEWRTQNEID KILTKPIVPV DLYRGIRDTQ LVGVSGYSKE
101: GLPVIAIGVG LSTYDKASVH YYVQSHIQMN EYRDRVVLPS ASKKQGRPIC TCLKILDMSG LKLSALSQIK LMTAITTIDD LNYPEKTETY YVVNVPYIFS
201: ACWKTIKPLL QERTKKKIQV LKGCGKDELL KIMDYESLPH FCRREGSGSG RHISNGTVDN CFSLDHSFHQ DLYDYVKQQA LVKGSGAPIR HGSVHVKFPE
301: PDTEGNKIFD TLENEFQKLG NDQKI

Arabidopsis Description

At1g55840/F14J16_2 [Source:UniProtKB/TrEMBL;Acc:Q8W580]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.