Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY17710 | Canola | cytosol | 98.2 | 98.2 |
| CDY40544 | Canola | cytosol | 88.02 | 89.09 |
| CDY28908 | Canola | cytosol | 88.02 | 88.82 |
| CDY41066 | Canola | cytosol | 88.32 | 88.59 |
| CDY25949 | Canola | cytosol | 87.43 | 87.69 |
| AT5G47730.1 | Thale cress | cytosol | 86.83 | 85.04 |
| KRH51210 | Soybean | cytosol | 70.36 | 72.31 |
| KRH01941 | Soybean | cytosol | 69.16 | 71.3 |
| KRH11617 | Soybean | cytosol | 70.06 | 71.12 |
| KRH36621 | Soybean | cytosol | 69.46 | 70.52 |
| VIT_10s0116g00400.t01 | Wine grape | cytosol | 69.46 | 68.64 |
| GSMUA_Achr7P06060_001 | Banana | cytosol | 68.26 | 68.47 |
| GSMUA_Achr3P12050_001 | Banana | cytosol | 66.77 | 66.77 |
| CDY52903 | Canola | cytosol | 63.47 | 64.83 |
| CDY53762 | Canola | cytosol | 63.17 | 64.53 |
| CDY10527 | Canola | cytosol | 62.57 | 64.31 |
| CDY42389 | Canola | cytosol | 62.57 | 64.31 |
| EER90026 | Sorghum | cytosol | 63.47 | 64.24 |
| Os02t0200000-01 | Rice | cytosol | 62.87 | 64.22 |
| GSMUA_Achr3P28070_001 | Banana | cytosol | 64.07 | 63.69 |
| TraesCS6D01G149100.1 | Wheat | cytosol | 62.28 | 63.61 |
| TraesCS6B01G188100.1 | Wheat | cytosol | 62.28 | 63.61 |
| TraesCS6A01G164200.1 | Wheat | cytosol | 62.28 | 63.61 |
| GSMUA_Achr1P19200_001 | Banana | cytosol | 64.07 | 63.5 |
| TraesCS7A01G378400.1 | Wheat | cytosol | 61.38 | 63.08 |
| TraesCS7B01G280200.2 | Wheat | cytosol | 61.08 | 62.77 |
| TraesCS7D01G375200.1 | Wheat | cytosol | 61.08 | 62.77 |
| Solyc11g012790.1.1 | Tomato | cytosol | 63.47 | 62.72 |
| PGSC0003DMT400034789 | Potato | cytosol | 63.47 | 62.72 |
| EES04709 | Sorghum | cytosol | 61.38 | 62.69 |
| Zm00001d015785_P001 | Maize | extracellular | 61.08 | 62.39 |
| HORVU6Hr1G032510.1 | Barley | cytosol, nucleus, peroxisome | 62.28 | 60.47 |
| GSMUA_Achr4P13090_001 | Banana | cytosol | 60.78 | 60.42 |
| GSMUA_Achr1P09480_001 | Banana | cytosol | 60.18 | 60.0 |
| HORVU7Hr1G090330.11 | Barley | cytosol, nucleus, plastid | 60.48 | 59.41 |
| Zm00001d046538_P003 | Maize | cytosol | 63.77 | 54.2 |
| Zm00001d053648_P005 | Maize | cytosol, endoplasmic reticulum, plastid | 52.69 | 51.01 |
| Os06t0607200-01 | Rice | cytosol | 20.36 | 46.9 |
| CDX99587 | Canola | cytosol, mitochondrion | 20.66 | 24.38 |
| CDY15888 | Canola | cytosol | 20.36 | 24.03 |
| CDY11954 | Canola | cytosol | 11.38 | 19.49 |
| CDX77773 | Canola | cytosol | 22.75 | 18.67 |
| CDY17730 | Canola | cytosol | 22.46 | 18.66 |
| CDX89709 | Canola | cytosol, mitochondrion | 21.26 | 15.6 |
| CDY11957 | Canola | cytosol | 20.36 | 15.28 |
| CDX90317 | Canola | cytosol | 24.25 | 15.08 |
| CDY12126 | Canola | cytosol | 23.95 | 14.95 |
| CDY15887 | Canola | cytosol | 24.55 | 14.94 |
| CDX99586 | Canola | cytosol | 24.55 | 14.91 |
| CDX75444 | Canola | cytosol | 23.05 | 14.42 |
| CDX69071 | Canola | cytosol | 23.05 | 14.42 |
| CDY45318 | Canola | cytosol, plastid | 21.56 | 14.4 |
| CDX82040 | Canola | cytosol | 24.55 | 13.6 |
| CDY52084 | Canola | cytosol | 23.65 | 13.46 |
| CDY42378 | Canola | nucleus | 25.75 | 13.37 |
| CDY10540 | Canola | cytosol, nucleus, plastid | 25.45 | 13.22 |
| CDY12125 | Canola | cytosol | 24.25 | 13.15 |
| CDY17469 | Canola | cytosol | 22.46 | 13.13 |
| CDY13810 | Canola | cytosol | 24.85 | 13.13 |
| CDX90316 | Canola | cytosol | 24.25 | 13.11 |
| CDY39363 | Canola | cytosol | 23.05 | 13.01 |
| CDX77382 | Canola | cytosol | 23.65 | 12.76 |
| CDX76291 | Canola | cytosol | 22.46 | 12.67 |
| CDY50018 | Canola | vacuole | 23.65 | 12.36 |
| CDY29415 | Canola | nucleus | 22.75 | 12.36 |
| CDX85889 | Canola | cytosol | 22.46 | 12.36 |
| CDY36780 | Canola | plastid | 20.66 | 12.11 |
| CDX68133 | Canola | cytosol | 21.86 | 12.01 |
| CDY17397 | Canola | cytosol | 20.66 | 11.6 |
| CDY51966 | Canola | cytosol | 20.36 | 11.43 |
| CDX69225 | Canola | mitochondrion | 20.36 | 11.2 |
| CDY51073 | Canola | mitochondrion, nucleus | 15.57 | 10.18 |
| CDY02262 | Canola | cytosol, plastid | 23.35 | 5.41 |
| CDY36781 | Canola | extracellular | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDX77792 | EnsemblPlantsGene:GSBRNA2T00128831001 | Gene3D:3.40.525.10 | InterPro:CRAL-TRIO_dom | InterPro:CRAL-TRIO_dom_sf | InterPro:CRAL/TRIO_N_dom |
| InterPro:CRAL/TRIO_N_dom_sf | InterPro:IPR001251 | InterPro:IPR036865 | PANTHER:PTHR23324 | PANTHER:PTHR23324:SF140 | PFAM:PF00650 |
| PFAM:PF03765 | PFscan:PS50191 | ProteinID:CDX77792 | ProteinID:CDX77792.1 | SMART:SM00516 | SMART:SM01100 |
| SUPFAM:SSF46938 | SUPFAM:SSF52087 | UniParc:UPI0004EE7AA2 | MapMan:35.1 | : | : |
Description
BnaC07g20460D
Coordinates
chrLK031812:-:1812618..1815070
Molecular Weight (calculated)
37636.1 Da
IEP (calculated)
7.876
GRAVY (calculated)
-0.390
Length
334 amino acids
Sequence
(BLAST)
(BLAST)
001: MGIVSEEEAI DELQKLINQV EGPLKKTFER VHQGYLRENL SRFLKARDWN VSKAHTMLLD CLRWRVDSEI DSILSKPIVP SELYRDVRDS QLIGMSGYTR
101: EGLPVFAIGV GLSTFDKASV HYYVQSHIQI NEYRDRVLLP SMSKKNGRPI TTCVKVLDMT GLKLSALSQI KLVTIISTID DLNYPEKTNT YYVVNAPYIF
201: SACWKVVKPL LHERTTKKVH VLSGSGKDEL LKIMDYTSLP HFCRRGSSGS SHHTQSVDCF SVDHPFHQQL YSYVKHHCET QGQGEPAKQG SFHVGFPEPG
301: ADGVQIAKTI ESEMHKSENC NGLGKPVDDR TVGP
101: EGLPVFAIGV GLSTFDKASV HYYVQSHIQI NEYRDRVLLP SMSKKNGRPI TTCVKVLDMT GLKLSALSQI KLVTIISTID DLNYPEKTNT YYVVNAPYIF
201: SACWKVVKPL LHERTTKKVH VLSGSGKDEL LKIMDYTSLP HFCRRGSSGS SHHTQSVDCF SVDHPFHQQL YSYVKHHCET QGQGEPAKQG SFHVGFPEPG
301: ADGVQIAKTI ESEMHKSENC NGLGKPVDDR TVGP
001: MGIVSEEAID EFQELMDQVE EPLKKTYERV HQGYLRENLG RFLKARDWNV CKAHTMLVEC LRWRVDNEID SILSKPIVPT ELYRDVRDSQ LIGMSGYTKE
101: GLPVFAIGVG LSTFDKASVH YYVQSHIQIN EYRDRVLLPS ISKKNGRPIT TCVKVLDMTG LKLSALSQIK LVTIISTIDD LNYPEKTNTY YVVNAPYIFS
201: ACWKVVKPLL QERTRKKVHV LSGCGRDELL KIMDFTSLPH FCRSGSSGSS HHTQSANCFS INHPFHQQLY NYVKHHYETQ GQAEPAKQGS FHVGFPEPEA
301: ERCVIAKTIE SELHKFENRN GLAVSIDDRK SSHETLANGD L
101: GLPVFAIGVG LSTFDKASVH YYVQSHIQIN EYRDRVLLPS ISKKNGRPIT TCVKVLDMTG LKLSALSQIK LVTIISTIDD LNYPEKTNTY YVVNAPYIFS
201: ACWKVVKPLL QERTRKKVHV LSGCGRDELL KIMDFTSLPH FCRSGSSGSS HHTQSANCFS INHPFHQQLY NYVKHHYETQ GQAEPAKQGS FHVGFPEPEA
301: ERCVIAKTIE SELHKFENRN GLAVSIDDRK SSHETLANGD L
Arabidopsis Description
At5g47730 [Source:UniProtKB/TrEMBL;Acc:Q9FIK6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.