Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra038021.1-P | Field mustard | cytosol | 99.69 | 99.69 |
| CDY53762 | Canola | cytosol | 98.78 | 98.78 |
| CDY42389 | Canola | cytosol | 92.97 | 93.54 |
| CDY10527 | Canola | cytosol | 92.66 | 93.23 |
| AT1G55840.1 | Thale cress | cytosol | 90.52 | 91.08 |
| Os09t0258000-01 | Rice | cytosol | 65.75 | 64.18 |
| CDY40544 | Canola | cytosol | 64.22 | 63.64 |
| TraesCS5B01G166800.1 | Wheat | cytosol | 65.14 | 63.58 |
| TraesCS5A01G170000.1 | Wheat | cytosol | 65.14 | 63.58 |
| EER96447 | Sorghum | cytosol | 65.14 | 63.58 |
| TraesCS5D01G174400.1 | Wheat | cytosol | 65.14 | 63.58 |
| CDX77792 | Canola | cytosol | 64.83 | 63.47 |
| CDY28908 | Canola | cytosol | 64.22 | 63.44 |
| CDY17710 | Canola | cytosol | 64.53 | 63.17 |
| CDY41066 | Canola | cytosol | 64.22 | 63.06 |
| HORVU5Hr1G052230.2 | Barley | cytosol | 64.53 | 62.8 |
| CDY25949 | Canola | cytosol | 63.91 | 62.76 |
| Zm00001d005118_P002 | Maize | cytosol | 61.16 | 50.76 |
| CDX99587 | Canola | cytosol, mitochondrion | 22.02 | 25.44 |
| CDY15888 | Canola | cytosol | 21.71 | 25.09 |
| CDY11954 | Canola | cytosol | 11.31 | 18.97 |
| CDX77773 | Canola | cytosol | 22.94 | 18.43 |
| CDY17730 | Canola | cytosol | 22.63 | 18.41 |
| CDY11957 | Canola | cytosol | 22.32 | 16.4 |
| CDX89709 | Canola | cytosol, mitochondrion | 22.02 | 15.82 |
| CDX82040 | Canola | cytosol | 28.44 | 15.42 |
| CDX90317 | Canola | cytosol | 25.08 | 15.27 |
| CDY12126 | Canola | cytosol | 24.77 | 15.14 |
| CDY15887 | Canola | cytosol | 25.38 | 15.12 |
| CDX99586 | Canola | cytosol | 25.38 | 15.09 |
| CDX69071 | Canola | cytosol | 24.46 | 14.98 |
| CDX75444 | Canola | cytosol | 24.46 | 14.98 |
| CDY13810 | Canola | cytosol | 28.44 | 14.72 |
| CDY52084 | Canola | cytosol | 26.3 | 14.65 |
| CDY45318 | Canola | cytosol, plastid | 22.32 | 14.6 |
| CDY39363 | Canola | cytosol | 26.3 | 14.53 |
| CDY12125 | Canola | cytosol | 27.22 | 14.45 |
| CDX90316 | Canola | cytosol | 27.22 | 14.4 |
| CDY17469 | Canola | cytosol | 24.77 | 14.19 |
| CDX85889 | Canola | cytosol | 26.3 | 14.17 |
| CDX77382 | Canola | cytosol | 26.61 | 14.05 |
| CDX68133 | Canola | cytosol | 25.99 | 13.98 |
| CDY29415 | Canola | nucleus | 25.99 | 13.82 |
| CDY42378 | Canola | nucleus | 26.91 | 13.69 |
| CDY10540 | Canola | cytosol, nucleus, plastid | 26.91 | 13.69 |
| CDX76291 | Canola | cytosol | 24.77 | 13.68 |
| CDY36780 | Canola | plastid | 22.94 | 13.16 |
| CDY50018 | Canola | vacuole | 25.08 | 12.83 |
| CDY51966 | Canola | cytosol | 22.63 | 12.44 |
| CDY17397 | Canola | cytosol | 22.63 | 12.44 |
| CDX69225 | Canola | mitochondrion | 22.94 | 12.36 |
| CDY51073 | Canola | mitochondrion, nucleus | 15.6 | 9.98 |
| CDY02262 | Canola | cytosol, plastid | 24.16 | 5.48 |
| CDY36781 | Canola | extracellular | 0.0 | 0.0 |
Protein Annotations
| Gene3D:3.40.525.10 | MapMan:35.1 | UniProt:A0A078IV85 | EnsemblPlants:CDY52903 | ProteinID:CDY52903 | ProteinID:CDY52903.1 |
| InterPro:CRAL-TRIO_dom | InterPro:CRAL-TRIO_dom_sf | InterPro:CRAL/TRIO_N_dom | InterPro:CRAL/TRIO_N_dom_sf | ncoils:Coil | EnsemblPlantsGene:GSBRNA2T00008077001 |
| InterPro:IPR001251 | InterPro:IPR036865 | PFAM:PF00650 | PFAM:PF03765 | PFscan:PS50191 | PANTHER:PTHR23324 |
| PANTHER:PTHR23324:SF140 | SMART:SM00516 | SMART:SM01100 | SUPFAM:SSF46938 | SUPFAM:SSF52087 | UniParc:UPI0004EEC92C |
Description
BnaA06g00150DBnaA06g00150D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IV85]
Coordinates
chrLK033141:+:6505..9032
Molecular Weight (calculated)
37300.9 Da
IEP (calculated)
8.012
GRAVY (calculated)
-0.420
Length
327 amino acids
Sequence
(BLAST)
(BLAST)
001: MSMASEEAVK QLRTLMEDVE DESLRESYRN IHQGYPTETL LRFLKARDFN VHKSHKMLLD CLEWRTQNEI DSILTKPIVP VELYRGIRDS QLVGLSGYSK
101: EGLPVIAIGV GLSTYDKASV HYYVQSHIQM NEYRDRVVLP SATKKQGRPI CTCLKILDMS GLKLSALSQI KLMTTITTID DLNYPEKTET YYIVNVPYIF
201: SACWKTIKPL LQERTKKKIQ VLKGCGKDEL LKVMDYESLP HFCRREGSGS GRHISNGAED NCFSLDHSFH QELYSYVKQQ ALVKGPSNAP IRHGSVHVRF
301: PEPATEGTKI FDTLESEFQK LGCDQKV
101: EGLPVIAIGV GLSTYDKASV HYYVQSHIQM NEYRDRVVLP SATKKQGRPI CTCLKILDMS GLKLSALSQI KLMTTITTID DLNYPEKTET YYIVNVPYIF
201: SACWKTIKPL LQERTKKKIQ VLKGCGKDEL LKVMDYESLP HFCRREGSGS GRHISNGAED NCFSLDHSFH QELYSYVKQQ ALVKGPSNAP IRHGSVHVRF
301: PEPATEGTKI FDTLESEFQK LGCDQKV
001: MSITNEEAVK QLRALMEDVD DSLRESYRNI HQGYPTENLL RFLKARDGNV QKAHKMLLEC LEWRTQNEID KILTKPIVPV DLYRGIRDTQ LVGVSGYSKE
101: GLPVIAIGVG LSTYDKASVH YYVQSHIQMN EYRDRVVLPS ASKKQGRPIC TCLKILDMSG LKLSALSQIK LMTAITTIDD LNYPEKTETY YVVNVPYIFS
201: ACWKTIKPLL QERTKKKIQV LKGCGKDELL KIMDYESLPH FCRREGSGSG RHISNGTVDN CFSLDHSFHQ DLYDYVKQQA LVKGSGAPIR HGSVHVKFPE
301: PDTEGNKIFD TLENEFQKLG NDQKI
101: GLPVIAIGVG LSTYDKASVH YYVQSHIQMN EYRDRVVLPS ASKKQGRPIC TCLKILDMSG LKLSALSQIK LMTAITTIDD LNYPEKTETY YVVNVPYIFS
201: ACWKTIKPLL QERTKKKIQV LKGCGKDELL KIMDYESLPH FCRREGSGSG RHISNGTVDN CFSLDHSFHQ DLYDYVKQQA LVKGSGAPIR HGSVHVKFPE
301: PDTEGNKIFD TLENEFQKLG NDQKI
Arabidopsis Description
At1g55840/F14J16_2 [Source:UniProtKB/TrEMBL;Acc:Q8W580]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.