Factsheet for TraesCS5A01G170000.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G174400.1	Wheat	cytosol	99.7	99.7
TraesCS5B01G166800.1	Wheat	cytosol	99.7	99.7
HORVU5Hr1G052230.2	Barley	cytosol	96.72	96.43
Os09t0258000-01	Rice	cytosol	85.67	85.67
EER96447	Sorghum	cytosol	82.39	82.39
Zm00001d005118_P002	Maize	cytosol	78.21	66.5
CDY52903	Canola	cytosol	63.58	65.14
Bra038021.1-P	Field mustard	cytosol	63.28	64.83
TraesCS6A01G164200.1	Wheat	cytosol	63.28	64.83
CDY53762	Canola	cytosol	63.28	64.83
CDY42389	Canola	cytosol	62.69	64.62
Bra030831.1-P	Field mustard	cytosol	62.39	64.31
CDY10527	Canola	cytosol	62.39	64.31
TraesCS7A01G378400.1	Wheat	cytosol	61.79	63.69
AT1G55840.1	Thale cress	cytosol	61.49	63.38
TraesCS2A01G499900.1	Wheat	mitochondrion	21.19	18.07
TraesCS6A01G284800.1	Wheat	cytosol	25.37	13.71
TraesCS6A01G097100.2	Wheat	cytosol, nucleus, plastid	25.67	13.65
TraesCS2A01G327200.2	Wheat	nucleus	23.58	13.37
TraesCS7A01G240000.3	Wheat	endoplasmic reticulum, plastid	25.67	12.82
TraesCS3A01G255000.6	Wheat	cytosol	24.18	12.7
TraesCS6A01G097200.1	Wheat	plastid	22.69	12.4
TraesCS1A01G366700.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole	24.78	11.66

Protein Annotations

EnsemblPlants:TraesCS5A01G170000.1	EnsemblPlantsGene:TraesCS5A01G170000	Gene3D:3.40.525.10	InterPro:CRAL-TRIO_dom	InterPro:CRAL-TRIO_dom_sf	InterPro:CRAL/TRIO_N_dom
InterPro:CRAL/TRIO_N_dom_sf	InterPro:IPR001251	InterPro:IPR036865	PANTHER:PTHR23324	PANTHER:PTHR23324:SF142	PFAM:PF00650
PFAM:PF03765	PFscan:PS50191	PRINTS:PR00180	SEG:seg	SMART:SM00516	SMART:SM01100
SUPFAM:SSF46938	SUPFAM:SSF52087	TIGR:cd00170	MapMan:35.1	:	:

Description

No Description!

Coordinates

chr5A:-:362415847..362421046

Molecular Weight (calculated)

37915.6 Da

IEP (calculated)

8.175

GRAVY (calculated)

-0.384

Length

335 amino acids

Sequence
(BLAST)

001: MAAASEEAIK QFSVLMEQLE EPLKTTFQNV HQGYPRGTLL RFLKAREWNV PKAYKMLMDC LNWRLQNEID SVLAKPILPA DLYRSIRDTL LVGLTGYSKQ
101: GQPVYAFGVG LSTFDRASVN YYLQSHIQMN EYRDRVVLPG ASEMSGKQIN TCLKVMDMTG LKLSALNQIK MLSTITAVDD LNYPEKTETY YIVNAPYVFS
201: ACWKVVKPLL QERTKKKIKV LYGPGRDELL KVMDYASLPH FCKREGSGSG SSSDEVDCYS YDHPFHQELY NYVKQQALRN QDSVGPAKQG SMHVRVPTPD
301: LEEAKIMETI QSELHSLKGG DGISRSFSRI TIEGP

Best Arabidopsis Sequence Match ( AT1G55840.1 )
(BLAST)

001: MSITNEEAVK QLRALMEDVD DSLRESYRNI HQGYPTENLL RFLKARDGNV QKAHKMLLEC LEWRTQNEID KILTKPIVPV DLYRGIRDTQ LVGVSGYSKE
101: GLPVIAIGVG LSTYDKASVH YYVQSHIQMN EYRDRVVLPS ASKKQGRPIC TCLKILDMSG LKLSALSQIK LMTAITTIDD LNYPEKTETY YVVNVPYIFS
201: ACWKTIKPLL QERTKKKIQV LKGCGKDELL KIMDYESLPH FCRREGSGSG RHISNGTVDN CFSLDHSFHQ DLYDYVKQQA LVKGSGAPIR HGSVHVKFPE
301: PDTEGNKIFD TLENEFQKLG NDQKI

Arabidopsis Description

At1g55840/F14J16_2 [Source:UniProtKB/TrEMBL;Acc:Q8W580]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.