Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY42389 | Canola | cytosol | 98.77 | 98.77 |
| Bra030831.1-P | Field mustard | cytosol | 98.46 | 98.46 |
| CDY53762 | Canola | cytosol | 93.85 | 93.27 |
| CDY52903 | Canola | cytosol | 93.23 | 92.66 |
| AT1G55840.1 | Thale cress | cytosol | 90.46 | 90.46 |
| CDY40544 | Canola | cytosol | 64.0 | 63.03 |
| CDY28908 | Canola | cytosol | 64.0 | 62.84 |
| Os09t0258000-01 | Rice | cytosol | 64.62 | 62.69 |
| CDX77792 | Canola | cytosol | 64.31 | 62.57 |
| CDY41066 | Canola | cytosol | 64.0 | 62.46 |
| EER96447 | Sorghum | cytosol | 64.31 | 62.39 |
| TraesCS5A01G170000.1 | Wheat | cytosol | 64.31 | 62.39 |
| TraesCS5B01G166800.1 | Wheat | cytosol | 64.31 | 62.39 |
| TraesCS5D01G174400.1 | Wheat | cytosol | 64.31 | 62.39 |
| CDY17710 | Canola | cytosol | 64.0 | 62.28 |
| CDY25949 | Canola | cytosol | 63.69 | 62.16 |
| HORVU5Hr1G052230.2 | Barley | cytosol | 63.69 | 61.61 |
| Zm00001d005118_P002 | Maize | cytosol | 60.92 | 50.25 |
| CDX99587 | Canola | cytosol, mitochondrion | 20.92 | 24.03 |
| CDY15888 | Canola | cytosol | 20.62 | 23.67 |
| CDY11954 | Canola | cytosol | 11.08 | 18.46 |
| CDX77773 | Canola | cytosol | 22.15 | 17.69 |
| CDY17730 | Canola | cytosol | 21.85 | 17.66 |
| CDY11957 | Canola | cytosol | 21.23 | 15.51 |
| CDX89709 | Canola | cytosol, mitochondrion | 20.92 | 14.95 |
| CDX90317 | Canola | cytosol | 24.0 | 14.53 |
| CDX82040 | Canola | cytosol | 26.77 | 14.43 |
| CDY45318 | Canola | cytosol, plastid | 22.15 | 14.4 |
| CDY12126 | Canola | cytosol | 23.69 | 14.39 |
| CDX69071 | Canola | cytosol | 23.38 | 14.23 |
| CDX75444 | Canola | cytosol | 23.38 | 14.23 |
| CDY15887 | Canola | cytosol | 23.69 | 14.03 |
| CDX99586 | Canola | cytosol | 23.69 | 14.0 |
| CDY52084 | Canola | cytosol | 24.92 | 13.8 |
| CDY12125 | Canola | cytosol | 26.15 | 13.8 |
| CDY13810 | Canola | cytosol | 26.77 | 13.77 |
| CDX90316 | Canola | cytosol | 26.15 | 13.75 |
| CDY39363 | Canola | cytosol | 24.92 | 13.68 |
| CDX85889 | Canola | cytosol | 25.54 | 13.67 |
| CDY17469 | Canola | cytosol | 24.0 | 13.66 |
| CDX68133 | Canola | cytosol | 25.23 | 13.49 |
| CDX77382 | Canola | cytosol | 25.23 | 13.25 |
| CDY42378 | Canola | nucleus | 26.15 | 13.22 |
| CDY10540 | Canola | cytosol, nucleus, plastid | 26.15 | 13.22 |
| CDX76291 | Canola | cytosol | 24.0 | 13.18 |
| CDY29415 | Canola | nucleus | 24.62 | 13.01 |
| CDY50018 | Canola | vacuole | 24.62 | 12.52 |
| CDY36780 | Canola | plastid | 21.85 | 12.46 |
| CDY51966 | Canola | cytosol | 21.23 | 11.6 |
| CDY17397 | Canola | cytosol | 21.23 | 11.6 |
| CDX69225 | Canola | mitochondrion | 21.23 | 11.37 |
| CDY51073 | Canola | mitochondrion, nucleus | 15.08 | 9.59 |
| CDY02262 | Canola | cytosol, plastid | 23.69 | 5.34 |
| CDY36781 | Canola | extracellular | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDY10527 | EnsemblPlantsGene:GSBRNA2T00032480001 | Gene3D:3.40.525.10 | InterPro:CRAL-TRIO_dom | InterPro:CRAL-TRIO_dom_sf | InterPro:CRAL/TRIO_N_dom |
| InterPro:CRAL/TRIO_N_dom_sf | InterPro:IPR001251 | InterPro:IPR036865 | PANTHER:PTHR23324 | PANTHER:PTHR23324:SF86 | PFAM:PF00650 |
| PFAM:PF03765 | PFscan:PS50191 | ProteinID:CDY10527 | ProteinID:CDY10527.1 | SMART:SM00516 | SMART:SM01100 |
| SUPFAM:SSF46938 | SUPFAM:SSF52087 | UniParc:UPI0004EB13FD | UniProt:A0A078FC29 | MapMan:35.1 | : |
Description
BnaC03g70870DBnaC03g70870D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FC29]
Coordinates
chrLK032004:-:147367..149640
Molecular Weight (calculated)
37069.4 Da
IEP (calculated)
7.588
GRAVY (calculated)
-0.460
Length
325 amino acids
Sequence
(BLAST)
(BLAST)
001: MGTASEEAVK QLRTLMEDVD DESLRESYRN IHQGYPTETL LRFLKARDYN VHKSHQMLLD CLQWRTQNEI DNILNKPIVP VELYRGIRDS QLVGLSGYSK
101: EGLPVIAIGV GLSTYDKASV HYYIQSHIQM NEYRDRVVLP SATKKQGRPI CTCLKVLDMS GLKFSALSQI KLMTAITTID DLNYPEKTET YYIVNVPYIF
201: SACWKTIKPL LQERTKKKIQ VLKGCGKDEL LKVMDYESLP HFCRREGSGS GRHISNGTVD NCFSLDHSFH QELYDYVHQQ ALVKGSSAPI RHGSVHVKFP
301: EPDTEGTKIF DTLESEFQKL GNDKA
101: EGLPVIAIGV GLSTYDKASV HYYIQSHIQM NEYRDRVVLP SATKKQGRPI CTCLKVLDMS GLKFSALSQI KLMTAITTID DLNYPEKTET YYIVNVPYIF
201: SACWKTIKPL LQERTKKKIQ VLKGCGKDEL LKVMDYESLP HFCRREGSGS GRHISNGTVD NCFSLDHSFH QELYDYVHQQ ALVKGSSAPI RHGSVHVKFP
301: EPDTEGTKIF DTLESEFQKL GNDKA
001: MSITNEEAVK QLRALMEDVD DSLRESYRNI HQGYPTENLL RFLKARDGNV QKAHKMLLEC LEWRTQNEID KILTKPIVPV DLYRGIRDTQ LVGVSGYSKE
101: GLPVIAIGVG LSTYDKASVH YYVQSHIQMN EYRDRVVLPS ASKKQGRPIC TCLKILDMSG LKLSALSQIK LMTAITTIDD LNYPEKTETY YVVNVPYIFS
201: ACWKTIKPLL QERTKKKIQV LKGCGKDELL KIMDYESLPH FCRREGSGSG RHISNGTVDN CFSLDHSFHQ DLYDYVKQQA LVKGSGAPIR HGSVHVKFPE
301: PDTEGNKIFD TLENEFQKLG NDQKI
101: GLPVIAIGVG LSTYDKASVH YYVQSHIQMN EYRDRVVLPS ASKKQGRPIC TCLKILDMSG LKLSALSQIK LMTAITTIDD LNYPEKTETY YVVNVPYIFS
201: ACWKTIKPLL QERTKKKIQV LKGCGKDELL KIMDYESLPH FCRREGSGSG RHISNGTVDN CFSLDHSFHQ DLYDYVKQQA LVKGSGAPIR HGSVHVKFPE
301: PDTEGNKIFD TLENEFQKLG NDQKI
Arabidopsis Description
At1g55840/F14J16_2 [Source:UniProtKB/TrEMBL;Acc:Q8W580]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.