Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra010699.1-P | Field mustard | cytosol | 98.88 | 98.88 |
| CDY12126 | Canola | cytosol | 96.09 | 96.45 |
| AT4G39180.1 | Thale cress | cytosol | 83.43 | 80.87 |
| CDY15887 | Canola | cytosol | 72.07 | 70.49 |
| CDX99586 | Canola | cytosol | 71.69 | 70.0 |
| KRH24439 | Soybean | plastid | 39.11 | 64.02 |
| CDY15888 | Canola | cytosol | 32.22 | 61.13 |
| CDX99587 | Canola | cytosol, mitochondrion | 31.66 | 60.07 |
| CDX75444 | Canola | cytosol | 57.91 | 58.24 |
| CDX69071 | Canola | cytosol | 57.73 | 58.05 |
| CDX89709 | Canola | cytosol, mitochondrion | 48.23 | 56.92 |
| KRH51503 | Soybean | cytosol | 60.71 | 56.89 |
| KRH60806 | Soybean | cytosol | 60.34 | 56.64 |
| KRH29420 | Soybean | cytosol, nucleus, plastid | 58.85 | 56.13 |
| CDY45318 | Canola | cytosol, plastid | 51.58 | 55.4 |
| CDY17469 | Canola | cytosol | 58.47 | 54.99 |
| PGSC0003DMT400001903 | Potato | cytosol, nucleus, plastid | 57.54 | 53.83 |
| PGSC0003DMT400043532 | Potato | cytosol | 55.49 | 53.5 |
| Solyc01g109860.2.1 | Tomato | cytosol, nucleus, plastid | 57.17 | 53.48 |
| CDX76291 | Canola | cytosol | 58.47 | 53.04 |
| Solyc10g053900.1.1 | Tomato | cytosol, plastid | 55.87 | 52.72 |
| GSMUA_Achr6P03210_001 | Banana | cytosol | 56.24 | 50.84 |
| GSMUA_Achr5P23630_001 | Banana | cytosol | 56.98 | 50.83 |
| Os02t0440900-00 | Rice | cytosol | 55.68 | 50.0 |
| Os10t0122600-01 | Rice | cytosol, nucleus, plastid | 55.31 | 49.67 |
| HORVU2Hr1G082530.1 | Barley | cytosol | 53.45 | 49.57 |
| TraesCS2D01G335700.2 | Wheat | nucleus | 54.38 | 49.41 |
| TraesCS2A01G327200.2 | Wheat | nucleus | 54.19 | 49.24 |
| TraesCS2B01G354800.2 | Wheat | nucleus | 54.19 | 49.24 |
| CDY11954 | Canola | cytosol | 17.88 | 49.23 |
| PGSC0003DMT400021690 | Potato | nucleus | 55.31 | 49.17 |
| Solyc11g040280.1.1 | Tomato | cytosol | 54.56 | 49.0 |
| OQU84321 | Sorghum | cytosol | 50.47 | 48.05 |
| OQU85018 | Sorghum | nucleus | 54.56 | 47.8 |
| Zm00001d016601_P006 | Maize | cytosol | 53.45 | 47.44 |
| GSMUA_Achr2P14280_001 | Banana | cytosol, nucleus, plastid | 56.61 | 46.06 |
| CDX90316 | Canola | cytosol | 52.14 | 45.31 |
| CDX69225 | Canola | mitochondrion | 51.21 | 45.3 |
| CDY12125 | Canola | cytosol | 51.96 | 45.29 |
| CDX82040 | Canola | cytosol | 50.09 | 44.61 |
| TraesCS6B01G125700.1 | Wheat | plastid | 50.47 | 44.06 |
| TraesCS6A01G097200.1 | Wheat | plastid | 50.28 | 44.05 |
| Os02t0133200-01 | Rice | plasma membrane | 51.21 | 43.51 |
| TraesCS6D01G085200.1 | Wheat | plastid | 49.53 | 43.25 |
| CDY11957 | Canola | cytosol | 35.57 | 42.92 |
| CDY13810 | Canola | cytosol | 50.28 | 42.72 |
| Zm00001d015175_P002 | Maize | plastid | 51.02 | 42.48 |
| HORVU6Hr1G017580.5 | Barley | plastid | 49.53 | 42.36 |
| CDX85889 | Canola | cytosol | 47.67 | 42.17 |
| CDY39363 | Canola | cytosol | 46.37 | 42.06 |
| CDX68133 | Canola | cytosol | 47.49 | 41.94 |
| CDY29415 | Canola | nucleus | 46.55 | 40.65 |
| CDY17730 | Canola | cytosol | 29.42 | 39.3 |
| CDX77773 | Canola | cytosol | 29.24 | 38.57 |
| CDY52084 | Canola | cytosol | 42.09 | 38.5 |
| CDX77382 | Canola | cytosol | 42.09 | 36.51 |
| CDY42378 | Canola | nucleus | 43.58 | 36.39 |
| CDY10540 | Canola | cytosol, nucleus, plastid | 43.39 | 36.24 |
| CDY50018 | Canola | vacuole | 42.64 | 35.84 |
| CDY51966 | Canola | cytosol | 38.73 | 34.96 |
| CDY17397 | Canola | cytosol | 38.17 | 34.45 |
| CDY51073 | Canola | mitochondrion, nucleus | 32.4 | 34.05 |
| CDY36780 | Canola | plastid | 36.13 | 34.04 |
| CDY40544 | Canola | cytosol | 15.46 | 25.15 |
| CDY53762 | Canola | cytosol | 15.27 | 25.08 |
| CDY52903 | Canola | cytosol | 15.27 | 25.08 |
| CDY28908 | Canola | cytosol | 15.46 | 25.08 |
| CDY41066 | Canola | cytosol | 15.27 | 24.62 |
| CDY25949 | Canola | cytosol | 15.08 | 24.32 |
| CDY42389 | Canola | cytosol | 14.71 | 24.31 |
| CDX77792 | Canola | cytosol | 15.08 | 24.25 |
| CDY10527 | Canola | cytosol | 14.53 | 24.0 |
| CDY17710 | Canola | cytosol | 14.71 | 23.65 |
| CDY02262 | Canola | cytosol, plastid | 54.75 | 20.4 |
| CDY36781 | Canola | extracellular | 0.19 | 0.6 |
Protein Annotations
| Gene3D:1.10.8.20 | Gene3D:3.40.525.10 | MapMan:35.1 | GO:A0A078DMQ1 | EnsemblPlants:CDX90317 | ProteinID:CDX90317 |
| ProteinID:CDX90317.1 | InterPro:CRAL-TRIO_dom | InterPro:CRAL-TRIO_dom_sf | InterPro:CRAL/TRIO_N_dom | InterPro:CRAL/TRIO_N_dom_sf | ncoils:Coil |
| EnsemblPlantsGene:GSBRNA2T00150900001 | InterPro:IPR001251 | InterPro:IPR036865 | PFAM:PF00650 | PFAM:PF03765 | PRINTS:PR00180 |
| PFscan:PS50191 | PANTHER:PTHR23324 | PANTHER:PTHR23324:SF144 | SMART:SM00516 | SMART:SM01100 | SUPFAM:SSF46938 |
| SUPFAM:SSF52087 | TMHMM:TMhelix | UniParc:UPI0004EE6ADC | SEG:seg | : | : |
Description
BnaA08g16670D
Coordinates
chrLK031862:-:1208029..1210881
Molecular Weight (calculated)
61610.7 Da
IEP (calculated)
9.145
GRAVY (calculated)
-0.589
Length
537 amino acids
Sequence
(BLAST)
(BLAST)
001: MTETMAEISE DEKRLTKLCS LKKKAINATN KFKHSMTKRG RRHSRVRCVS IVDEIDTEEL RQVDAFRQAL ILEELLPSKH DDHHMMLRFL RARKFDIEKA
101: KQMWADMLNW RKDYGADTIM EDFDFGEIDE VVKYYPQGYH GVDKEGRPVY IERLGQVDAV KLMKVTTIDR YVKYHVKEFE KTFTVKFPAC SIAAKRHIDQ
201: STTILDVQGV GLNNFNKAAK DLLQSIQKID SDNYPETLNR MFIINAGYGF RLVWSGVKSF LDPKTTAKIH VLSNKYQSKL LEIIDANELP EFLGGKCTCA
301: DKGGCMRSDK GPWNDPEIFK LVQNGEGRCP RKSSSGIEEK TISVCKNVTE EKREVSEPEE TYKKAAAAME KFIDKTVDTG AYPTQEHHKA KNIVPDPKDL
401: LLSPAVECKG YLYGSVMALL MGIVGVMRLT KNMPKKLTQG NVYPDGVTVM PTQEYRAMVK KMTDLEEKCK SMEAAQVAIS MEREKVLDAA LRRVDQLELQ
501: LSETKKALDE TMTRQHEIMA YIEKKKKKKR KWIPEKT
101: KQMWADMLNW RKDYGADTIM EDFDFGEIDE VVKYYPQGYH GVDKEGRPVY IERLGQVDAV KLMKVTTIDR YVKYHVKEFE KTFTVKFPAC SIAAKRHIDQ
201: STTILDVQGV GLNNFNKAAK DLLQSIQKID SDNYPETLNR MFIINAGYGF RLVWSGVKSF LDPKTTAKIH VLSNKYQSKL LEIIDANELP EFLGGKCTCA
301: DKGGCMRSDK GPWNDPEIFK LVQNGEGRCP RKSSSGIEEK TISVCKNVTE EKREVSEPEE TYKKAAAAME KFIDKTVDTG AYPTQEHHKA KNIVPDPKDL
401: LLSPAVECKG YLYGSVMALL MGIVGVMRLT KNMPKKLTQG NVYPDGVTVM PTQEYRAMVK KMTDLEEKCK SMEAAQVAIS MEREKVLDAA LRRVDQLELQ
501: LSETKKALDE TMTRQHEIMA YIEKKKKKKR KWIPEKT
001: MADTMVAHMD RHNKIDVEIS EDDKRLTKLC SLKKKAINAT NKFKHSMTKK GRRHSRVACV SIVDEIDTEE LQAVDAFRQA LILDELLPSK HDDHHMMLRF
101: LRARKFDLEK AKQMWSDMLN WRKEYGADTI MEDFDFKEIE EVVKYYPQGY HGVDKEGRPI YIERLGQVDA TKLMKVTTID RYVKYHVKEF EKTFNVKFPA
201: CSIAAKRHID QSTTILDVQG VGLSNFNKAA KDLLQSIQKI DNDNYPETLN RMFIINAGCG FRLLWNTVKS FLDPKTTAKI HVLGNKYQTK LLEIIDANEL
301: PEFLGGKCTC ADKGGCMRSD KGPWNDPEIF KLVQNGEGRC LRRSLSGIEE KTIFEYNNET KKKCEPEETH KQSAAEMEKK FIDTNVDAAA AADWPTKLNK
401: AEKNPTDLKD VYSAVNPLER KGYLYGSVMA LLMGIVGVMR LTKNMPRRLT EANVYSREGS AVYQDGVTVM SKQEYIAMVK KITDLEEKCK SMEAQAAFYM
501: EREKTLDAAL RRIDQLELQL SETNKALDET MTRQHEIMAF IEKKKKKKRK FLLF
101: LRARKFDLEK AKQMWSDMLN WRKEYGADTI MEDFDFKEIE EVVKYYPQGY HGVDKEGRPI YIERLGQVDA TKLMKVTTID RYVKYHVKEF EKTFNVKFPA
201: CSIAAKRHID QSTTILDVQG VGLSNFNKAA KDLLQSIQKI DNDNYPETLN RMFIINAGCG FRLLWNTVKS FLDPKTTAKI HVLGNKYQTK LLEIIDANEL
301: PEFLGGKCTC ADKGGCMRSD KGPWNDPEIF KLVQNGEGRC LRRSLSGIEE KTIFEYNNET KKKCEPEETH KQSAAEMEKK FIDTNVDAAA AADWPTKLNK
401: AEKNPTDLKD VYSAVNPLER KGYLYGSVMA LLMGIVGVMR LTKNMPRRLT EANVYSREGS AVYQDGVTVM SKQEYIAMVK KITDLEEKCK SMEAQAAFYM
501: EREKTLDAAL RRIDQLELQL SETNKALDET MTRQHEIMAF IEKKKKKKRK FLLF
Arabidopsis Description
SFH2Phosphatidylinositol/phosphatidylcholine transfer protein SFH2 [Source:UniProtKB/Swiss-Prot;Acc:F4JVA9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.