CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra002841.1-P	Field mustard	cytosol	85.88	97.71
CDY17397	Canola	cytosol	97.31	97.31
AT5G56160.1	Thale cress	cytosol	79.33	81.8
CDY11957	Canola	cytosol	57.48	76.85
CDY11954	Canola	cytosol	22.86	69.74
CDY36780	Canola	plastid	65.55	68.42
Zm00001d039981_P001	Maize	cytosol	13.11	63.41
HORVU1Hr1G088100.1	Barley	cytosol	15.8	58.39
Zm00001d031251_P001	Maize	cytosol, mitochondrion	12.44	57.36
HORVU7Hr1G037200.1	Barley	nucleus	19.5	54.21
HORVU3Hr1G112740.3	Barley	nucleus	19.66	52.23
HORVU7Hr1G040650.2	Barley	cytosol, nucleus, plastid	19.33	51.34
Zm00001d012531_P001	Maize	mitochondrion	11.09	50.38
CDX99587	Canola	cytosol, mitochondrion	23.53	49.47
CDY15888	Canola	cytosol	23.19	48.76
CDY42378	Canola	nucleus	51.09	47.28
CDY10540	Canola	cytosol, nucleus, plastid	50.25	46.5
GSMUA_Achr4P09770_001	Banana	cytosol	35.13	45.83
CDY50018	Canola	vacuole	49.08	45.7
CDY51073	Canola	mitochondrion, nucleus	38.49	44.81
Zm00001d045670_P001	Maize	cytosol	13.45	42.55
GSMUA_Achr7P06190_001	Banana	cytosol	41.01	42.29
Zm00001d035770_P002	Maize	cytosol, endoplasmic reticulum	21.01	42.09
Zm00001d014589_P001	Maize	cytosol	6.72	41.24
Zm00001d043774_P001	Maize	cytosol	5.88	41.18
HORVU6Hr1G071770.19	Barley	cytosol	42.35	40.78
GSMUA_Achr3P11960_001	Banana	cytosol, plastid	41.68	40.66
TraesCS6D01G265200.1	Wheat	cytosol	42.18	40.55
TraesCS6A01G284800.1	Wheat	cytosol	42.18	40.48
KXG40069	Sorghum	nucleus	42.86	40.48
TraesCS6B01G313500.1	Wheat	cytosol	42.02	40.39
Os02t0721800-01	Rice	cytosol	41.51	40.36
Os08t0341700-01	Rice	nucleus	43.19	40.35
KXG30865	Sorghum	cytosol	41.51	40.03
GSMUA_Achr3P04130_001	Banana	nucleus	41.68	39.81
TraesCS2B01G533900.1	Wheat	nucleus	42.02	39.68
TraesCS7D01G238000.2	Wheat	cytosol	40.34	39.67
GSMUA_Achr5P04200_001	Banana	plastid	41.51	39.52
Zm00001d017876_P018	Maize	cytosol	40.84	39.38
Os08t0497300-01	Rice	cytosol, plastid	39.83	39.24
TraesCS2D01G506400.1	Wheat	nucleus	41.68	39.18
CDY15887	Canola	cytosol	36.13	39.16
EER96946	Sorghum	cytosol, nucleus, plastid	39.33	39.07
CDX99586	Canola	cytosol	35.97	38.91
OQU80990	Sorghum	cytosol	39.66	38.88
CDY17730	Canola	cytosol	26.22	38.81
Os09t0481100-01	Rice	nucleus	39.83	38.79
CDX90317	Canola	cytosol	34.96	38.73
CDY12126	Canola	cytosol	34.79	38.69
CDX77773	Canola	cytosol	26.39	38.57
Zm00001d051674_P037	Maize	cytosol	39.66	38.56
CDX89709	Canola	cytosol, mitochondrion	29.41	38.46
CDX75444	Canola	cytosol	34.29	38.2
CDX69071	Canola	cytosol	34.29	38.2
GSMUA_Achr8P24430_001	Banana	endoplasmic reticulum	42.18	38.03
Zm00001d005995_P003	Maize	nucleus	37.82	37.56
CDY52084	Canola	cytosol	36.97	37.48
CDY39363	Canola	cytosol	36.97	37.16
HORVU7Hr1G048880.11	Barley	mitochondrion	40.17	36.94
CDY45318	Canola	cytosol, plastid	30.92	36.8
Zm00001d031316_P020	Maize	cytosol	39.83	36.74
CDX82040	Canola	cytosol	36.47	35.99
CDY29415	Canola	nucleus	37.14	35.94
CDX90316	Canola	cytosol	37.31	35.92
CDY12125	Canola	cytosol	37.14	35.88
CDX77382	Canola	cytosol	37.14	35.7
CDX68133	Canola	cytosol	36.47	35.69
TraesCS7A01G240000.3	Wheat	endoplasmic reticulum, plastid	40.17	35.62
CDX85889	Canola	cytosol	36.3	35.58
HORVU1Hr1G091860.1	Barley	cytosol	9.75	35.58
TraesCS7B01G135600.2	Wheat	plastid	39.66	35.38
Zm00001d008240_P001	Maize	cytosol, extracellular, mitochondrion, nucleus	11.76	35.35
CDY17469	Canola	cytosol	33.78	35.2
CDY13810	Canola	cytosol	37.14	34.97
Zm00001d045718_P001	Maize	cytosol	14.79	34.78
Zm00001d050131_P002	Maize	cytosol	37.14	34.59
CDX76291	Canola	cytosol	33.78	33.95
Zm00001d052840_P016	Maize	plastid	40.34	33.1
CDX69225	Canola	mitochondrion	32.44	31.8
Zm00001d037983_P001	Maize	cytosol	12.27	30.93
Zm00001d010393_P001	Maize	plastid	18.82	30.77
Zm00001d047488_P001	Maize	nucleus	6.55	24.38
CDY53762	Canola	cytosol	12.44	22.63
CDY52903	Canola	cytosol	12.44	22.63
CDY40544	Canola	cytosol	12.1	21.82
CDY28908	Canola	cytosol	12.1	21.75
CDY25949	Canola	cytosol	12.1	21.62
CDY41066	Canola	cytosol	12.1	21.62
CDY10527	Canola	cytosol	11.6	21.23
CDY42389	Canola	cytosol	11.6	21.23
CDX77792	Canola	cytosol	11.43	20.36
CDY17710	Canola	cytosol	11.26	20.06
Zm00001d035370_P003	Maize	plastid	11.6	16.91
Zm00001d005778_P001	Maize	plastid	6.72	14.23
CDY02262	Canola	cytosol, plastid	33.78	13.95
Bra002840.1-P	Field mustard	cytosol	0.5	3.9
CDY36781	Canola	extracellular	0.5	1.79

Protein Annotations

Gene3D:1.10.8.20	Gene3D:3.40.525.10	MapMan:35.1	GO:A0A078IPU5	UniProt:A0A078IPU5	EnsemblPlants:CDY51966
ProteinID:CDY51966	ProteinID:CDY51966.1	InterPro:CRAL-TRIO_dom	InterPro:CRAL-TRIO_dom_sf	InterPro:CRAL/TRIO_N_dom_sf	GO:GO:0005575
GO:GO:0016020	GO:GO:0016021	EnsemblPlantsGene:GSBRNA2T00004557001	InterPro:IPR001251	InterPro:IPR036865	PFAM:PF00650
PFscan:PS50191	PANTHER:PTHR23324	PANTHER:PTHR23324:SF84	SMART:SM00516	SUPFAM:SSF46938	SUPFAM:SSF52087
TMHMM:TMhelix	UniParc:UPI0004EF3A28	SEG:seg	:	:	:

Description

BnaCnng21500DBnaCnng21500D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IPU5]

Coordinates

chrLK033042:+:19518..22747

Molecular Weight (calculated)

68289.1 Da

IEP (calculated)

7.442

GRAVY (calculated)

-0.527

Length

595 amino acids

Sequence
(BLAST)

001: MSGREQTRDK LSDSECTEDE PRRSRIGNLR KKAINCSSKL THPLKRKGKR KIDYSVPFIE DVRDENEEKI VLKLRQELLN KDLLPPRHDD YHMLLRFLKT
101: MEFSIEKTVT AWEQMLKWRK EFGADRIIHD FNFKELDKVV RHYPQGYHGV DKDGRPIYIE RLGKAHPGKL MDVTTIERYL KYHVQEFERA LQEKLPACSI
201: AAKRRVTTTT TILDVEGLGM KNFSPTAANL LASIAKVDCN YYPETLHRMF IVNAGIGFRT LLWPAAQKLL DPMTIAKIQV LEPKSLSKLL EAIDSSQLPE
301: FLGGLCKCAN EGGCLRSNKG PWNDPEIIEA CFFVFSLQLV HHMEVYHVPQ TTKAPLHIRD NDSATRMIPP NDTLKEEPDS EEYYHSTGSR SPMHTCFVSP
401: HSDKASTSDG DKIITTVESI EPAQGELSQP QSLNTDTESS SSATTSRREG GQVSRYSALR EKIKGENIVH LVKILVAFPL MKLFALFAFL LHGYWQRQNY
501: VPVLHDSSIN NEMILQCLER LKKLEKDFTD TSGIPLKIPE ANEKLLTESL ERIKSLELDL DETKSVLHIT LTKQLQITEE IESRYQEEQR KRCCF

Best Arabidopsis Sequence Match ( AT5G56160.1 )
(BLAST)

001: MSGREQTGEK LSDSEYIEEE PRRSRIGNLK KKAFSCSTKL THPLKMRKGK RKIDFQIPLI EDVRDEKEEK LVSKLRQQLL QKDLLPPVHD DYHMLLRFLK
101: TMEFKIEKTV TAWEEMLKWR KEFGTDRIIQ DFNFKELDEV TRHYPQGYHG VDKDGRPIYI ERLGKAHPGK LMEVTTIERY LKYHVQEFER TLQEKLPACS
201: VAAKRRVTTT TTILDVEGLG MKNFTPTAAN LLATIAKVDC NYYPETLHRM FIVNAGIGFR SFLWPAAQKL LDPMTIAKIQ VLEPRSLSKL LEAIDSSQLP
301: EFLGGLCKCP NEGGCLRSNK GPWNDPEIVE LVHHMEVNNV PQTTTAPLHV RDYDSTTCTI SPKETLKEEP EPEEYYSSTG SRSSMHTCIV PPLSDKASTS
401: DGDKFITTVE SIESAQSQLL DADTENTFAN TSVREGGQIL RFGALREKIN SENIFHLVKI LLVFPLKLFV LFGFLLPGYW QRQNTVVVPD SSTNNKVLEC
501: FDRLKKMEKE FTEISRKQVK IPEANEKLLA ESLERIKSLE LDLDKTKSVL HITLTKQLQI TEQLESQDEE RRKGCCF

Arabidopsis Description

SFH14Phosphatidylinositol/phosphatidylcholine transfer protein SFH14 [Source:UniProtKB/Swiss-Prot;Acc:F4K6D3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.