Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY15887 | Canola | cytosol | 98.91 | 99.09 |
| Bra030294.1-P | Field mustard | cytosol, nucleus, plastid | 87.82 | 98.98 |
| AT2G21540.2 | Thale cress | cytosol, nucleus, vacuole | 87.64 | 87.96 |
| CDY12126 | Canola | cytosol | 70.91 | 72.9 |
| CDX90317 | Canola | cytosol | 70.0 | 71.69 |
| CDY15888 | Canola | cytosol | 32.91 | 63.96 |
| KRH24439 | Soybean | plastid | 37.82 | 63.41 |
| CDX69071 | Canola | cytosol | 61.09 | 62.92 |
| CDX75444 | Canola | cytosol | 61.09 | 62.92 |
| CDX99587 | Canola | cytosol, mitochondrion | 32.36 | 62.9 |
| KRH51503 | Soybean | cytosol | 65.09 | 62.48 |
| KRH60806 | Soybean | cytosol | 64.0 | 61.54 |
| KRH29420 | Soybean | cytosol, nucleus, plastid | 62.36 | 60.92 |
| CDY45318 | Canola | cytosol, plastid | 54.73 | 60.2 |
| PGSC0003DMT400043532 | Potato | cytosol | 60.36 | 59.6 |
| CDX89709 | Canola | cytosol, mitochondrion | 48.91 | 59.12 |
| CDY17469 | Canola | cytosol | 61.27 | 59.02 |
| Solyc10g053900.1.1 | Tomato | cytosol, plastid | 60.18 | 58.17 |
| PGSC0003DMT400001903 | Potato | cytosol, nucleus, plastid | 60.55 | 58.01 |
| Solyc01g109860.2.1 | Tomato | cytosol, nucleus, plastid | 60.0 | 57.49 |
| CDX76291 | Canola | cytosol | 61.45 | 57.09 |
| PGSC0003DMT400021690 | Potato | nucleus | 60.73 | 55.3 |
| Solyc11g040280.1.1 | Tomato | cytosol | 60.0 | 55.18 |
| GSMUA_Achr6P03210_001 | Banana | cytosol | 57.82 | 53.54 |
| GSMUA_Achr5P23630_001 | Banana | cytosol | 58.55 | 53.49 |
| TraesCS2D01G335700.2 | Wheat | nucleus | 56.55 | 52.62 |
| HORVU2Hr1G082530.1 | Barley | cytosol | 55.27 | 52.5 |
| TraesCS2A01G327200.2 | Wheat | nucleus | 56.18 | 52.28 |
| TraesCS2B01G354800.2 | Wheat | nucleus | 55.82 | 51.95 |
| Os10t0122600-01 | Rice | cytosol, nucleus, plastid | 56.0 | 51.51 |
| Os02t0440900-00 | Rice | cytosol | 55.82 | 51.34 |
| CDY11954 | Canola | cytosol | 17.82 | 50.26 |
| Zm00001d016601_P006 | Maize | cytosol | 55.27 | 50.25 |
| OQU85018 | Sorghum | nucleus | 56.0 | 50.24 |
| OQU84321 | Sorghum | cytosol | 50.55 | 49.29 |
| CDX90316 | Canola | cytosol | 55.27 | 49.19 |
| CDY12125 | Canola | cytosol | 55.09 | 49.19 |
| CDX69225 | Canola | mitochondrion | 53.82 | 48.76 |
| GSMUA_Achr2P14280_001 | Banana | cytosol, nucleus, plastid | 58.36 | 48.64 |
| CDX82040 | Canola | cytosol | 53.09 | 48.42 |
| CDY13810 | Canola | cytosol | 54.0 | 46.99 |
| TraesCS6A01G097200.1 | Wheat | plastid | 52.18 | 46.82 |
| TraesCS6B01G125700.1 | Wheat | plastid | 52.18 | 46.67 |
| TraesCS6D01G085200.1 | Wheat | plastid | 52.0 | 46.5 |
| HORVU6Hr1G017580.5 | Barley | plastid | 52.0 | 45.54 |
| Os02t0133200-01 | Rice | plasma membrane | 51.82 | 45.09 |
| CDX68133 | Canola | cytosol | 49.64 | 44.9 |
| CDY39363 | Canola | cytosol | 48.18 | 44.76 |
| CDX85889 | Canola | cytosol | 49.27 | 44.65 |
| CDY11957 | Canola | cytosol | 35.64 | 44.04 |
| Zm00001d015175_P002 | Maize | plastid | 51.64 | 44.03 |
| CDY29415 | Canola | nucleus | 48.36 | 43.25 |
| CDY17730 | Canola | cytosol | 28.91 | 39.55 |
| CDX77773 | Canola | cytosol | 28.73 | 38.82 |
| CDY52084 | Canola | cytosol | 39.82 | 37.31 |
| CDY51966 | Canola | cytosol | 38.91 | 35.97 |
| CDX77382 | Canola | cytosol | 40.18 | 35.7 |
| CDY17397 | Canola | cytosol | 38.36 | 35.46 |
| CDY50018 | Canola | vacuole | 41.09 | 35.37 |
| CDY42378 | Canola | nucleus | 41.09 | 35.15 |
| CDY10540 | Canola | cytosol, nucleus, plastid | 40.91 | 34.99 |
| CDY36780 | Canola | plastid | 36.0 | 34.74 |
| CDY51073 | Canola | mitochondrion, nucleus | 30.73 | 33.07 |
| CDY40544 | Canola | cytosol | 15.45 | 25.76 |
| CDY52903 | Canola | cytosol | 15.09 | 25.38 |
| CDY53762 | Canola | cytosol | 15.09 | 25.38 |
| CDY28908 | Canola | cytosol | 15.27 | 25.38 |
| CDY41066 | Canola | cytosol | 14.91 | 24.62 |
| CDX77792 | Canola | cytosol | 14.91 | 24.55 |
| CDY25949 | Canola | cytosol | 14.73 | 24.32 |
| CDY42389 | Canola | cytosol | 14.18 | 24.0 |
| CDY17710 | Canola | cytosol | 14.55 | 23.95 |
| CDY10527 | Canola | cytosol | 14.0 | 23.69 |
| CDY02262 | Canola | cytosol, plastid | 56.73 | 21.65 |
| CDY36781 | Canola | extracellular | 0.0 | 0.0 |
Protein Annotations
| Gene3D:1.10.8.20 | Gene3D:3.40.525.10 | MapMan:35.1 | GO:A0A078EEQ8 | EnsemblPlants:CDX99586 | ProteinID:CDX99586 |
| ProteinID:CDX99586.1 | InterPro:CRAL-TRIO_dom | InterPro:CRAL-TRIO_dom_sf | InterPro:CRAL/TRIO_N_dom | InterPro:CRAL/TRIO_N_dom_sf | ncoils:Coil |
| EnsemblPlantsGene:GSBRNA2T00108084001 | InterPro:IPR001251 | InterPro:IPR036865 | PFAM:PF00650 | PFAM:PF03765 | PRINTS:PR00180 |
| PFscan:PS50191 | PANTHER:PTHR23324 | PANTHER:PTHR23324:SF144 | SMART:SM00516 | SMART:SM01100 | SUPFAM:SSF46938 |
| SUPFAM:SSF52087 | UniParc:UPI0004EED9F3 | SEG:seg | : | : | : |
Description
BnaC04g33430D
Coordinates
chrLK031912:+:169795..173376
Molecular Weight (calculated)
62867.4 Da
IEP (calculated)
8.093
GRAVY (calculated)
-0.581
Length
550 amino acids
Sequence
(BLAST)
(BLAST)
001: MADTMSAHMD RHNKPDHECS EDDKKTKLCS FKKKAINASN KFKHSFTKKT RRNSRVMSVS IVDDIDVEEL QAVDAFRQAL ILDELLPSRH DDHHMMLRFL
101: RARKFDIEKA KQMWCDMINW RKEFGTDAIM EDFDFKEIDE VIKYYPQGYH GVDKEGRPIY IERLGQVDAT KLMQVTTIDR YVNYHVREFE KAFNIKLPAC
201: SIAAKRHIDQ STTILDVQGV GLKNFSKAAR DLLQRIQKID SDNYPESLNR MFIINAGSGF RLLWSTVKSF LDPKTTAKIH VLGNKYQSKL LEIIDSNELP
301: EFLGGNCTCA DKGGCMRSDK GPWNDPDIFK MVQNGEGKCP RKTLSNIEEK TISVYESTTE KCETFEKNSF NAENEKFTPI VDKTVDASST WPTSLHKTTF
401: TEPEADVYSA VKPSERKGGE GYLFGGVMSL VMGLMTVVRL TKNMPRKLTE AAIYGGAAEK GETAMVSTQE YMSMVKRMAE LEEKCRSLDN QPAPFSAEKE
501: QILNAALTRV DQLEFQLSET KKTLDEAMAK QLEIVAYIEK KKKKKKFFGF
101: RARKFDIEKA KQMWCDMINW RKEFGTDAIM EDFDFKEIDE VIKYYPQGYH GVDKEGRPIY IERLGQVDAT KLMQVTTIDR YVNYHVREFE KAFNIKLPAC
201: SIAAKRHIDQ STTILDVQGV GLKNFSKAAR DLLQRIQKID SDNYPESLNR MFIINAGSGF RLLWSTVKSF LDPKTTAKIH VLGNKYQSKL LEIIDSNELP
301: EFLGGNCTCA DKGGCMRSDK GPWNDPDIFK MVQNGEGKCP RKTLSNIEEK TISVYESTTE KCETFEKNSF NAENEKFTPI VDKTVDASST WPTSLHKTTF
401: TEPEADVYSA VKPSERKGGE GYLFGGVMSL VMGLMTVVRL TKNMPRKLTE AAIYGGAAEK GETAMVSTQE YMSMVKRMAE LEEKCRSLDN QPAPFSAEKE
501: QILNAALTRV DQLEFQLSET KKTLDEAMAK QLEIVAYIEK KKKKKKFFGF
001: MTDTMSAHMD RHNKLDYDGS EDEKKTKLCS LKKKAINASN KFKHSFTKRT RRNSRVMSVS IVDDIDLEEL QAVDAFRQAL ILDELLPSKH DDHHMMLRFL
101: RARKFDLEKA KQMWTDMIHW RKEFGVDTIM EDFDFKEIDE VLKYYPQGYH GVDKDGRPVY IERLGQVDAT KLMQVTTIDR YVKYHVREFE KTFNIKLPAC
201: SIAAKKHIDQ STTILDVQGV GLKSFSKAAR DLLQRIQKID SDNYPETLNR MFIINAGSGF RLLWSTVKSF LDPKTTAKIH VLGNKYQSKL LEIIDSNELP
301: EFLGGNCTCA DKGGCMRSDK GPWNDPDIFK MVQNGEGKCP RKTLSNIEEK TISVDENTTM KSDSFAKNKF DAENTKFIPM IDKTVNASTW PTNLHKSNYP
401: EPEDLYSAVK PSQRRGGEGY LFGGVMSLVM GLMTVVRLTK NMPRKLTEAA IYGGEVDKAE TTMVSNQEYM SMVKRMAELE EKCRSLDNQP AAFSPEKEQI
501: LTAALSRVDE LELQLAQTKK TLEETMATQH VIMAYIDKKK KKKKFFGF
101: RARKFDLEKA KQMWTDMIHW RKEFGVDTIM EDFDFKEIDE VLKYYPQGYH GVDKDGRPVY IERLGQVDAT KLMQVTTIDR YVKYHVREFE KTFNIKLPAC
201: SIAAKKHIDQ STTILDVQGV GLKSFSKAAR DLLQRIQKID SDNYPETLNR MFIINAGSGF RLLWSTVKSF LDPKTTAKIH VLGNKYQSKL LEIIDSNELP
301: EFLGGNCTCA DKGGCMRSDK GPWNDPDIFK MVQNGEGKCP RKTLSNIEEK TISVDENTTM KSDSFAKNKF DAENTKFIPM IDKTVNASTW PTNLHKSNYP
401: EPEDLYSAVK PSQRRGGEGY LFGGVMSLVM GLMTVVRLTK NMPRKLTEAA IYGGEVDKAE TTMVSNQEYM SMVKRMAELE EKCRSLDNQP AAFSPEKEQI
501: LTAALSRVDE LELQLAQTKK TLEETMATQH VIMAYIDKKK KKKKFFGF
Arabidopsis Description
SFH3Phosphatidylinositol/phosphatidylcholine transfer protein SFH3 [Source:UniProtKB/Swiss-Prot;Acc:Q93ZE9]
SUBAcon: [vacuole,nucleus,cytosol]
SUBAcon: [vacuole,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.