Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra010700.1-P | Field mustard | cytosol | 99.51 | 99.51 |
| CDY12125 | Canola | cytosol | 97.73 | 98.05 |
| AT4G39170.1 | Thale cress | cytosol, nucleus, plastid | 89.48 | 90.07 |
| CDY15888 | Canola | cytosol | 38.03 | 83.04 |
| CDX82040 | Canola | cytosol | 80.1 | 82.09 |
| CDX99587 | Canola | cytosol, mitochondrion | 37.22 | 81.27 |
| CDY13810 | Canola | cytosol | 82.2 | 80.38 |
| GSMUA_Achr3P28830_001 | Banana | nucleus | 33.01 | 76.98 |
| KRH60804 | Soybean | cytosol | 73.46 | 72.76 |
| VIT_03s0038g04470.t01 | Wine grape | cytosol | 73.46 | 72.64 |
| KRH29416 | Soybean | cytosol | 73.14 | 71.86 |
| KRH24438 | Soybean | cytosol | 72.82 | 71.54 |
| Solyc01g109870.2.1 | Tomato | cytosol | 71.04 | 70.24 |
| Solyc10g053970.1.1 | Tomato | cytosol | 70.71 | 70.14 |
| PGSC0003DMT400001942 | Potato | cytosol | 70.87 | 70.08 |
| KRH51499 | Soybean | cytosol | 71.2 | 68.64 |
| PGSC0003DMT400043545 | Potato | cytosol | 70.39 | 67.65 |
| GSMUA_Achr2P09690_001 | Banana | cytosol | 68.45 | 67.57 |
| GSMUA_Achr1P12050_001 | Banana | cytosol | 67.96 | 67.09 |
| GSMUA_Achr9P22020_001 | Banana | cytosol | 66.5 | 65.13 |
| KXG29407 | Sorghum | cytosol, nucleus, plastid | 64.4 | 63.58 |
| TraesCS6A01G097100.2 | Wheat | cytosol, nucleus, plastid | 64.24 | 63.02 |
| GSMUA_Achr10P... | Banana | cytosol | 56.47 | 62.54 |
| TraesCS6B01G125600.1 | Wheat | cytosol, nucleus, plastid | 63.75 | 62.54 |
| Zm00001d015174_P005 | Maize | cytosol | 65.05 | 61.47 |
| Os02t0133100-01 | Rice | cytosol | 41.75 | 60.99 |
| Zm00001d053994_P008 | Maize | cytosol, mitochondrion | 64.72 | 60.06 |
| CDY39363 | Canola | cytosol | 57.44 | 59.97 |
| Os05t0545000-01 | Rice | cytosol, nucleus, plastid | 57.93 | 58.4 |
| CDY29415 | Canola | nucleus | 57.77 | 58.05 |
| TraesCS6D01G085300.6 | Wheat | cytosol, nucleus, plastid | 61.0 | 57.91 |
| Zm00001d038880_P001 | Maize | cytosol | 57.61 | 57.61 |
| CDX85889 | Canola | cytosol | 56.47 | 57.5 |
| CDX68133 | Canola | cytosol | 56.47 | 57.4 |
| KXG22454 | Sorghum | cytosol | 57.28 | 57.19 |
| Zm00001d009439_P004 | Maize | cytosol | 57.12 | 57.12 |
| TraesCS1B01G384500.1 | Wheat | cytosol, nucleus, plastid | 56.31 | 56.04 |
| CDX75444 | Canola | cytosol | 47.9 | 55.43 |
| CDY15887 | Canola | cytosol | 49.19 | 55.37 |
| CDX99586 | Canola | cytosol | 49.19 | 55.27 |
| CDX69071 | Canola | cytosol | 47.57 | 55.06 |
| GSMUA_Achr3P28840_001 | Banana | mitochondrion | 32.52 | 54.62 |
| HORVU6Hr1G017570.5 | Barley | cytosol, nucleus, plastid | 64.24 | 53.29 |
| KXG33199 | Sorghum | cytosol | 51.78 | 52.89 |
| CDY45318 | Canola | cytosol, plastid | 42.72 | 52.8 |
| CDY17469 | Canola | cytosol | 48.71 | 52.71 |
| CDY12126 | Canola | cytosol | 45.15 | 52.15 |
| CDX90317 | Canola | cytosol | 45.31 | 52.14 |
| GSMUA_Achr1P25320_001 | Banana | cytosol | 54.53 | 51.53 |
| CDX89709 | Canola | cytosol, mitochondrion | 37.86 | 51.43 |
| CDX76291 | Canola | cytosol | 48.71 | 50.84 |
| Zm00001d011663_P003 | Maize | cytosol | 50.49 | 50.81 |
| TraesCS3D01G255900.4 | Wheat | cytosol | 49.68 | 49.92 |
| TraesCS3B01G287000.6 | Wheat | cytosol | 50.65 | 49.06 |
| TraesCS1D01G372200.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole | 55.99 | 48.46 |
| TraesCS3A01G255000.6 | Wheat | cytosol | 50.0 | 48.43 |
| TraesCS1A01G366700.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole | 55.66 | 48.31 |
| Zm00001d043733_P002 | Maize | mitochondrion | 42.88 | 48.27 |
| Os01t0701900-01 | Rice | nucleus | 51.46 | 47.39 |
| HORVU1Hr1G078880.9 | Barley | cytosol, nucleus | 55.66 | 47.19 |
| HORVU3Hr1G065830.17 | Barley | cytosol, mitochondrion, plastid | 50.32 | 46.49 |
| CDY11954 | Canola | cytosol | 14.24 | 45.13 |
| CDY11957 | Canola | cytosol | 31.72 | 44.04 |
| CDX69225 | Canola | mitochondrion | 43.2 | 43.99 |
| CDY52084 | Canola | cytosol | 38.84 | 40.89 |
| CDY42378 | Canola | nucleus | 42.39 | 40.75 |
| CDY10540 | Canola | cytosol, nucleus, plastid | 42.07 | 40.44 |
| CDX77382 | Canola | cytosol | 39.32 | 39.26 |
| CDY50018 | Canola | vacuole | 40.29 | 38.97 |
| CDY17730 | Canola | cytosol | 25.08 | 38.56 |
| CDX77773 | Canola | cytosol | 24.92 | 37.84 |
| CDY51966 | Canola | cytosol | 35.92 | 37.31 |
| CDY17397 | Canola | cytosol | 35.6 | 36.97 |
| CDY51073 | Canola | mitochondrion, nucleus | 29.77 | 36.01 |
| CDY36780 | Canola | plastid | 33.01 | 35.79 |
| CDY53762 | Canola | cytosol | 14.4 | 27.22 |
| CDY52903 | Canola | cytosol | 14.4 | 27.22 |
| CDY42389 | Canola | cytosol | 13.92 | 26.46 |
| CDY10527 | Canola | cytosol | 13.75 | 26.15 |
| CDY40544 | Canola | cytosol | 13.92 | 26.06 |
| CDY28908 | Canola | cytosol | 13.92 | 25.98 |
| CDY41066 | Canola | cytosol | 13.27 | 24.62 |
| CDY25949 | Canola | cytosol | 13.11 | 24.32 |
| CDX77792 | Canola | cytosol | 13.11 | 24.25 |
| CDY17710 | Canola | cytosol | 12.78 | 23.65 |
| CDY02262 | Canola | cytosol, plastid | 43.85 | 18.81 |
| CDY36781 | Canola | extracellular | 0.16 | 0.6 |
Protein Annotations
| Gene3D:1.10.8.20 | Gene3D:3.40.525.10 | MapMan:35.1 | GO:A0A078DM24 | EnsemblPlants:CDX90316 | ProteinID:CDX90316 |
| ProteinID:CDX90316.1 | InterPro:CRAL-TRIO_dom | InterPro:CRAL-TRIO_dom_sf | InterPro:CRAL/TRIO_N_dom | InterPro:CRAL/TRIO_N_dom_sf | ncoils:Coil |
| EnsemblPlantsGene:GSBRNA2T00150899001 | InterPro:IPR001251 | InterPro:IPR036865 | PFAM:PF00650 | PFAM:PF03765 | PRINTS:PR00180 |
| PFscan:PS50191 | PANTHER:PTHR23324 | PANTHER:PTHR23324:SF145 | SMART:SM00516 | SMART:SM01100 | SUPFAM:SSF46938 |
| SUPFAM:SSF52087 | TMHMM:TMhelix | UniParc:UPI0004EDE219 | SEG:seg | : | : |
Description
BnaA08g16680D
Coordinates
chrLK031862:+:1205057..1207915
Molecular Weight (calculated)
70396.9 Da
IEP (calculated)
8.989
GRAVY (calculated)
-0.486
Length
618 amino acids
Sequence
(BLAST)
(BLAST)
001: MSGPVDRFAI PCFEGLLSSE EKKERKSDFE ISEDERRTRI GSLKKKAINA STKFKHSLKK KKRRKNEGRV SSVSIEDVRD VEELQAVDEF RQALVMDELL
101: PSKHDDYHMM LRFLKARKFD VEKAKQMWGD MIQWRKEFGT DTIIQDFEFE EIDDVLKYYP QCYHSVDKEG RPVYIERLGK VDPNKLMQVT TIDRYLRYHV
201: KEFERSFMIK FPACTIAAKK HIDSSTTILD VQGVGLKNFS KYARELVTRL QKIDGDNYPE TLHQMFIINA GTGFRVIWST LKSFLDPKTT SKIHMLGNKY
301: QSKLLEVIDS SELPEFLGGT CTCADQGGCM LSDKGPWKNP DILKMVLHGG AHRAKQVVKV LNSEGKVIAY AKPSYPWIKG SDTSTAESGS EAEDVVVSPK
401: AIKNYSHLRL TPVREEAKIG SGETSFASSL AGYDEYVPMV DKAVDATWKV KPTTTINRAQ SKGALVTPNV PKEHESINAR VLVFFMAIVM AILAFFRTLS
501: NRVVTKQLPP PTRQPQIEGN TAAKEEEAEL LNSVLKKLTE LEEKIGALQS KPNEMPYEKE ELLNAAVCRV DALEAELIAT KKALYEALMR QEELLAYIDR
601: QEFAQSQKKK KRKHMFCF
101: PSKHDDYHMM LRFLKARKFD VEKAKQMWGD MIQWRKEFGT DTIIQDFEFE EIDDVLKYYP QCYHSVDKEG RPVYIERLGK VDPNKLMQVT TIDRYLRYHV
201: KEFERSFMIK FPACTIAAKK HIDSSTTILD VQGVGLKNFS KYARELVTRL QKIDGDNYPE TLHQMFIINA GTGFRVIWST LKSFLDPKTT SKIHMLGNKY
301: QSKLLEVIDS SELPEFLGGT CTCADQGGCM LSDKGPWKNP DILKMVLHGG AHRAKQVVKV LNSEGKVIAY AKPSYPWIKG SDTSTAESGS EAEDVVVSPK
401: AIKNYSHLRL TPVREEAKIG SGETSFASSL AGYDEYVPMV DKAVDATWKV KPTTTINRAQ SKGALVTPNV PKEHESINAR VLVFFMAIVM AILAFFRTLS
501: NRVVTKQLPP PTRQPQIEGN TAAKEEEAEL LNSVLKKLTE LEEKIGALQS KPNEMPYEKE ELLNAAVCRV DALEAELIAT KKALYEALMR QEELLAYIDR
601: QEFAQSQKKK KRKHMFCF
001: MSGPVDRFAI PCFEGILSSD EKKERKSDFE NSEDERRTRI GSLKKKAINA STKFKHSLKK KRRKSDVRVS SVSIEDVRDV EELQAVDEFR QALVMEELLP
101: HKHDDYHMML RFLKARKFDI EKAKHMWADM IQWRKEFGTD TIIQDFQFEE IDEVLKYYPH GYHSVDKEGR PVYIERLGKV DPNKLMQVTT LDRYIRYHVK
201: EFERSFMLKF PACTIAAKKY IDSSTTILDV QGVGLKNFTK SARELITRLQ KIDGDNYPET LHQMFIINAG PGFRLLWSTV KSFLDPKTTS KIHVLGCKYQ
301: SKLLEIIDSS ELPEFLGGAC TCADQGGCML SDKGPWKNPE IVKMVLHGGA HRAKQVVKVL NSDGKVIAYA KPSYPWIKGS DTSTAESGSE AEDIVVSPKA
401: VKSYSHLRLT PVREEAKVGS GETSFAGSFA GYDEYVPMVD KAVDATWKVK PTAINRAPSK GAHMPPNVPK DHESFSARVL VTFMAFVMAI LTFFRTVSNR
501: VVTKQLPPPP SQPQIEGSAA AEEADLLNSV LKKLTELEEK IGALQSKPSE MPYEKEELLN AAVCRVDALE AELIATKKAL YEALMRQEEL LAYIDRQEAA
601: QHQKKNKRKQ MFCF
101: HKHDDYHMML RFLKARKFDI EKAKHMWADM IQWRKEFGTD TIIQDFQFEE IDEVLKYYPH GYHSVDKEGR PVYIERLGKV DPNKLMQVTT LDRYIRYHVK
201: EFERSFMLKF PACTIAAKKY IDSSTTILDV QGVGLKNFTK SARELITRLQ KIDGDNYPET LHQMFIINAG PGFRLLWSTV KSFLDPKTTS KIHVLGCKYQ
301: SKLLEIIDSS ELPEFLGGAC TCADQGGCML SDKGPWKNPE IVKMVLHGGA HRAKQVVKVL NSDGKVIAYA KPSYPWIKGS DTSTAESGSE AEDIVVSPKA
401: VKSYSHLRLT PVREEAKVGS GETSFAGSFA GYDEYVPMVD KAVDATWKVK PTAINRAPSK GAHMPPNVPK DHESFSARVL VTFMAFVMAI LTFFRTVSNR
501: VVTKQLPPPP SQPQIEGSAA AEEADLLNSV LKKLTELEEK IGALQSKPSE MPYEKEELLN AAVCRVDALE AELIATKKAL YEALMRQEEL LAYIDRQEAA
601: QHQKKNKRKQ MFCF
Arabidopsis Description
SFH6Phosphatidylinositol/phosphatidylcholine transfer protein SFH6 [Source:UniProtKB/Swiss-Prot;Acc:F4JVA6]
SUBAcon: [plastid,nucleus,cytosol]
SUBAcon: [plastid,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.