Factsheet for TraesCS3B01G287000.6

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G255900.4	Wheat	cytosol	93.26	96.75
TraesCS3A01G255000.6	Wheat	cytosol	96.08	96.08
HORVU3Hr1G065830.17	Barley	cytosol, mitochondrion, plastid	88.56	84.45
GSMUA_Achr3P28830_001	Banana	nucleus	29.31	70.57
KXG33199	Sorghum	cytosol	65.83	69.42
TraesCS1B01G384500.1	Wheat	cytosol, nucleus, plastid	66.3	68.12
Zm00001d011663_P003	Maize	cytosol	63.48	65.96
Zm00001d043733_P002	Maize	mitochondrion	55.02	63.93
Os01t0701900-01	Rice	nucleus	65.99	62.74
CDY15888	Canola	cytosol	27.27	61.48
Bra030295.1-P	Field mustard	cytosol	27.27	61.48
CDX99587	Canola	cytosol, mitochondrion	26.8	60.42
GSMUA_Achr9P22020_001	Banana	cytosol	56.58	57.21
AT4G39170.1	Thale cress	cytosol, nucleus, plastid	50.94	52.93
VIT_03s0038g04470.t01	Wine grape	cytosol	51.72	52.8
CDX82040	Canola	cytosol	49.84	52.74
Solyc01g109870.2.1	Tomato	cytosol	51.41	52.48
KRH60804	Soybean	cytosol	50.94	52.08
TraesCS6B01G125600.1	Wheat	cytosol, nucleus, plastid	51.41	52.06
PGSC0003DMT400001942	Potato	cytosol	50.94	52.0
KRH29416	Soybean	cytosol	51.25	51.99
KRH24438	Soybean	cytosol	51.1	51.83
Solyc10g053970.1.1	Tomato	cytosol	50.31	51.52
CDY12125	Canola	cytosol	49.37	51.14
CDY13810	Canola	cytosol	50.63	51.11
Bra010700.1-P	Field mustard	cytosol	49.22	50.81
AT2G21520.3	Thale cress	cytosol	50.63	50.71
CDX90316	Canola	cytosol	49.06	50.65
Bra031196.1-P	Field mustard	cytosol	49.84	50.32
PGSC0003DMT400043545	Potato	cytosol	50.16	49.77
KRH51499	Soybean	cytosol	49.84	49.61
GSMUA_Achr3P28840_001	Banana	mitochondrion	26.96	46.74
GSMUA_Achr1P25320_001	Banana	cytosol	47.49	46.33
TraesCS2B01G354800.2	Wheat	nucleus	41.22	44.5
TraesCS2B01G533900.1	Wheat	nucleus	41.38	41.9
TraesCS6B01G125700.1	Wheat	plastid	39.97	41.46
TraesCS6B01G313500.1	Wheat	cytosol	39.19	40.39
TraesCS2B01G527900.2	Wheat	mitochondrion	23.98	38.83
TraesCS7B01G135600.2	Wheat	plastid	38.87	37.18
TraesCS6B01G188100.1	Wheat	cytosol	12.7	24.77
TraesCS7B01G280200.2	Wheat	cytosol	12.38	24.31
TraesCS5B01G166800.1	Wheat	cytosol	12.7	24.18

Protein Annotations

Gene3D:1.10.8.20	Gene3D:3.40.525.10	MapMan:35.1	InterPro:CRAL-TRIO_dom	InterPro:CRAL-TRIO_dom_sf	InterPro:CRAL/TRIO_N_dom
InterPro:CRAL/TRIO_N_dom_sf	ncoils:Coil	InterPro:IPR001251	InterPro:IPR036865	PFAM:PF00650	PFAM:PF03765
PFscan:PS50191	PANTHER:PTHR23324	PANTHER:PTHR23324:SF69	SMART:SM00516	SMART:SM01100	SUPFAM:SSF46938
SUPFAM:SSF52087	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS3B01G287000	EnsemblPlants:TraesCS3B01G287000.6	TIGR:cd00170	SEG:seg

Description

No Description!

Coordinates

chr3B:+:459247300..459254416

Molecular Weight (calculated)

72190.3 Da

IEP (calculated)

8.265

GRAVY (calculated)

-0.486

Length

638 amino acids

Sequence
(BLAST)

001: MSGPVDRSGR PGFEGFTHDD EKEESKSDED NSEGDNKAKK GSLKKRAISA GNKFRRSLRR KSKKKSGNLA SIEDIRDVQE LETVERFRRC LLDGGLLPER
101: HDDYHTMLRF LKARKFDIEK AKHMWSEMLR WRNEYGVDNI EEFDYTELNE VKKYYPQFYH GVDKEGRPVY VELVGKVDAN KLVKVTTLDR YIKYHVKEFE
201: RSFQMRFPAC SIAAKRHIDS STTILDVQGV GLKNFSKDAR ELIMRLQKID NDNYPETLCC LYIINAGQGF KMLWGTIKSF LDPQTASKIH VLGSKYQNKL
301: LEIIDESELP DFLGGKCRCE ESGGCSKSDK GPWKDPNIIE RVLNGEANYG QQILAISSTD GKTISYTKLH SSAKKTSDAS AESTSDVEDI TSPAAPLDAT
401: VNPDLTLHEP KSSGHASTSG SAPVVEESVP TVVDKLVDDV CHSPRATSMA STSGSFSLRN IRMALGVLRT QIVTCLTVLI MSLFMVIRSA PSRVSERFSR
501: QSIACDHNCG EFPQNLEFKV PYVSRRLREL EEKVVVLEAK PSQMPVEKEE VLNTAVCRVD ALEAEPISTK KVLYETLIRQ DELLAYIEKQ DKNKFRVCFP
601: LLFVRPFLSS GRARSWCLAL LVHTVTPSIN LQKKRFCF

Best Arabidopsis Sequence Match ( AT2G21520.1 )
(BLAST)

001: MSGPLDRFAR PCFEGFLSSD EKKERKSDFE NSEDERRTRI GSLKKKAINA STKFKHSLKK KSGRRKSDGR VSSVSIEDVR DVEELQAVDA FRQSLLMDEL
101: LPDRHDDYHM MLRFLKARKF DVEKAKQMWA DMIQWRKEFG TDTIIQDFDF EEINEVLKHY PQCYHGVDKE GRPIYIERLG KVDPNRLMQV TSMDRYVRYH
201: VKEFERSFMI KFPSCTISAK RHIDSSTTIL DVQGVGLKNF NKSARDLITR LQKIDGDNYP ETLHQMFIIN AGPGFRLLWN TVKSFLDPKT SAKIHVLGYK
301: YLSKLLEVID VNELPEFLGG ACTCADQGGC MLSDKGPWKN PEIVKMVLHG GAHRARQVVK VLNSEGKVIA YAKPSYTWIK GSDTSTAESG SDAEDIGSPK
401: AIKSFSHLRL TPVREEAKIA GETSLAGSFP GYDEYVPMVD KAVDATWKVK PAIQRVASRG ALMSPTVPKD HEGIKARVLV MFMAFLMAVF TFFRTVTKKL
501: PATTTSSPAE TQGNAIELGS NGEGVKEECR PPSPVPDLTE TDLLNCVTKK LTELEGKIGT LQSKPNEMPY EKEELLNAAV CRVDALEAEL IATKKALYEA
601: LMRQEELLAY IDRQEEAQFQ KMKKKKKKHL FCF

Arabidopsis Description

Sec14p-like phosphatidylinositol transfer family protein [Source:UniProtKB/TrEMBL;Acc:B3H588]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.