Factsheet for TraesCS6B01G125600.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:

nucleus 1
mitochondrion 1
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, plastid
Any Predictor:	cytosol, nucleus, plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G097100.2	Wheat	cytosol, nucleus, plastid	98.57	98.57
TraesCS6D01G085300.6	Wheat	cytosol, nucleus, plastid	93.65	90.63
KXG29407	Sorghum	cytosol, nucleus, plastid	83.17	83.71
HORVU6Hr1G017570.5	Barley	cytosol, nucleus, plastid	97.46	82.42
Os02t0133100-01	Rice	cytosol	54.92	81.8
Zm00001d015174_P005	Maize	cytosol	81.27	78.29
Zm00001d053994_P008	Maize	cytosol, mitochondrion	81.11	76.73
CDY15888	Canola	cytosol	32.38	72.08
Bra030295.1-P	Field mustard	cytosol	32.38	72.08
CDX99587	Canola	cytosol, mitochondrion	32.06	71.38
GSMUA_Achr1P12050_001	Banana	cytosol	70.63	71.09
GSMUA_Achr2P09690_001	Banana	cytosol	70.16	70.61
VIT_03s0038g04470.t01	Wine grape	cytosol	66.19	66.72
GSMUA_Achr10P...	Banana	cytosol	58.41	65.95
PGSC0003DMT400001942	Potato	cytosol	64.76	65.28
Solyc01g109870.2.1	Tomato	cytosol	64.6	65.12
AT4G39170.1	Thale cress	cytosol, nucleus, plastid	63.33	64.98
KRH29416	Soybean	cytosol	64.76	64.86
KRH60804	Soybean	cytosol	63.81	64.42
KRH24438	Soybean	cytosol	63.97	64.07
Solyc10g053970.1.1	Tomato	cytosol	63.33	64.04
CDY12125	Canola	cytosol	62.54	63.96
CDX90316	Canola	cytosol	62.54	63.75
Bra010700.1-P	Field mustard	cytosol	62.54	63.75
CDX82040	Canola	cytosol	60.63	63.35
PGSC0003DMT400043545	Potato	cytosol	64.29	62.99
CDY13810	Canola	cytosol	62.86	62.66
AT2G21520.3	Thale cress	cytosol	62.86	62.17
KRH51499	Soybean	cytosol	62.7	61.62
Bra031196.1-P	Field mustard	cytosol	61.75	61.55
TraesCS1B01G384500.1	Wheat	cytosol, nucleus, plastid	56.51	57.33
TraesCS3B01G287000.6	Wheat	cytosol	52.06	51.41
TraesCS2B01G354800.2	Wheat	nucleus	47.62	50.76
TraesCS2B01G533900.1	Wheat	nucleus	48.25	48.25
TraesCS6B01G313500.1	Wheat	cytosol	45.87	46.69
TraesCS6B01G125700.1	Wheat	plastid	44.6	45.69
TraesCS7B01G135600.2	Wheat	plastid	45.4	42.88
TraesCS2B01G527900.2	Wheat	mitochondrion	25.08	40.1
TraesCS6B01G188100.1	Wheat	cytosol	13.97	26.91
TraesCS7B01G280200.2	Wheat	cytosol	13.65	26.46
TraesCS5B01G166800.1	Wheat	cytosol	13.65	25.67

Protein Annotations

Gene3D:1.10.8.20	Gene3D:3.40.525.10	MapMan:35.1	InterPro:CRAL-TRIO_dom	InterPro:CRAL-TRIO_dom_sf	InterPro:CRAL/TRIO_N_dom
InterPro:CRAL/TRIO_N_dom_sf	ncoils:Coil	InterPro:IPR001251	InterPro:IPR036865	PFAM:PF00650	PFAM:PF03765
PRINTS:PR00180	PFscan:PS50191	PANTHER:PTHR23324	PANTHER:PTHR23324:SF145	SMART:SM00516	SMART:SM01100
SUPFAM:SSF46938	SUPFAM:SSF52087	EnsemblPlantsGene:TraesCS6B01G125600	EnsemblPlants:TraesCS6B01G125600.1	TIGR:cd00170	SEG:seg

Description

No Description!

Coordinates

chr6B:+:120662746..120667304

Molecular Weight (calculated)

71450.8 Da

IEP (calculated)

8.831

GRAVY (calculated)

-0.542

Length

630 amino acids

Sequence
(BLAST)

001: MSGHLDRLAR PVSGFEGCSS HDDRRSYERR SDFEISEDEK KTRMGSLKKK AIDASSKLRH SLKKKNRRKS GSRVLSVSIE DVRDLGELEE VEAFRQALIL
101: DELLPTRHDD YHMLLRFLKA RKFDIEKAKQ MWTDMLQWRK EYGTDTIVED FDYTELDTVL EYYPHGYHGV DKEGRPVYIE RLGKVDPNKL MNVTTMDRYV
201: RYHVKEFERS FLIKFPACSL AAKRHINSST TILDVQGVGL KNFSKTAREL IMRLQKVDND NYPETLHQMF IVNAGPGFRM LWSTVKSFLD PKTTSKIHVL
301: GNKCQSKLLE IIDASELPEF LGGTCTCPEY GGCLKAEKGP WKDANILKKV LNGEAQCARQ IVTVSNGTET IISYPKSKYQ TVRGSDTSTA ESGSEAEDAT
401: SPKALRSYIS HPKLTPVREE VKMIRATSFS TRMPEYDIPV VDKAVDATWK RELPRKAPLP SKDSSLATAT KASNRSLDQI IPALMAFVIA IVTLLRSVKD
501: VATKRLADKN ESDEQSSAVY QDCIPKEEFR PPSPGPGFAE SDLFSLVLQR LAELEAKVHA LEEKPSEMPC EKEELLNAAV RRVDALEAEL IVTKKALHEA
601: LIRQEELLAY VDRKTIAKAQ KKKKKPMSCY

Best Arabidopsis Sequence Match ( AT2G21520.3 )
(BLAST)

001: MSGPLDRFAR PSFTTGFEGF LSSDEKKERK SDFENSEDER RTRIGSLKKK AINASTKFKH SLKKKSGRRK SDGRVSSVSI EDVRDVEELQ AVDAFRQSLL
101: MDELLPDRHD DYHMMLRFLK ARKFDVEKAK QMWADMIQWR KEFGTDTIIQ DFDFEEINEV LKHYPQCYHG VDKEGRPIYI ERLGKVDPNR LMQVTSMDRY
201: VRYHVKEFER SFMIKFPSCT ISAKRHIDSS TTILDVQGVG LKNFNKSARD LITRLQKIDG DNYPETLHQM FIINAGPGFR LLWNTVKSFL DPKTSAKIHV
301: LGYKYLSKLL EVIDVNELPE FLGGACTCAD QGGCMLSDKG PWKNPEIVKM VLHGGAHRAR QVVKVLNSEG KVIAYAKPSY TWIKGSDTST AESGSDAEDI
401: GSPKAIKSFS HLRLTPVREE AKIAGETSLA GSFPGYDEYV PMVDKAVDAT WKVKPAIQRV ASRGALMSPT VPKDHEGIKA RVLVMFMAFL MAVFTFFRTV
501: TKKLPATTTS SPAETQGNAI ELGSNGEGVK EECRPPSPVP DLTETDLLNC VTKKLTELEG KIGTLQSKPN EMPYEKEELL NAAVCRVDAL EAELIATKKA
601: LYEALMRQEE LLAYIDRQEE AQFQKMKKKK KKHLFCF

Arabidopsis Description

Sec14p-like phosphatidylinositol transfer family protein [Source:UniProtKB/TrEMBL;Acc:B3H588]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.