Factsheet for TraesCS6D01G085300.6

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:

nucleus 1
mitochondrion 1
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, plastid
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G097100.2	Wheat	cytosol, nucleus, plastid	90.78	93.81
TraesCS6B01G125600.1	Wheat	cytosol, nucleus, plastid	90.63	93.65
KXG29407	Sorghum	cytosol, nucleus, plastid	76.5	79.55
HORVU6Hr1G017570.5	Barley	cytosol, nucleus, plastid	88.94	77.72
Os02t0133100-01	Rice	cytosol	49.77	76.6
Zm00001d015174_P005	Maize	cytosol	74.65	74.31
Zm00001d053994_P008	Maize	cytosol, mitochondrion	74.81	73.12
CDY15888	Canola	cytosol	31.34	72.08
Bra030295.1-P	Field mustard	cytosol	31.34	72.08
CDX99587	Canola	cytosol, mitochondrion	31.03	71.38
GSMUA_Achr1P12050_001	Banana	cytosol	65.9	68.53
GSMUA_Achr2P09690_001	Banana	cytosol	65.44	68.05
VIT_03s0038g04470.t01	Wine grape	cytosol	61.6	64.16
KRH29416	Soybean	cytosol	60.68	62.8
GSMUA_Achr10P...	Banana	cytosol	53.76	62.72
PGSC0003DMT400001942	Potato	cytosol	60.06	62.56
Solyc01g109870.2.1	Tomato	cytosol	59.91	62.4
AT4G39170.1	Thale cress	cytosol, nucleus, plastid	58.68	62.22
KRH24438	Soybean	cytosol	59.91	62.0
KRH60804	Soybean	cytosol	59.29	61.86
Solyc10g053970.1.1	Tomato	cytosol	58.68	61.32
CDY12125	Canola	cytosol	57.91	61.2
CDX90316	Canola	cytosol	57.91	61.0
Bra010700.1-P	Field mustard	cytosol	57.91	61.0
CDX82040	Canola	cytosol	56.07	60.53
PGSC0003DMT400043545	Potato	cytosol	59.29	60.03
CDY13810	Canola	cytosol	58.06	59.81
AT2G21520.3	Thale cress	cytosol	58.22	59.5
KRH51499	Soybean	cytosol	57.91	58.81
Bra031196.1-P	Field mustard	cytosol	56.99	58.7
TraesCS3D01G255900.4	Wheat	cytosol	48.54	51.38
TraesCS2D01G335700.2	Wheat	nucleus	45.01	49.58
TraesCS1D01G372200.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole	52.23	47.62
TraesCS2D01G506400.1	Wheat	nucleus	45.62	46.92
TraesCS7D01G238000.2	Wheat	cytosol	43.32	46.61
TraesCS6D01G265200.1	Wheat	cytosol	44.24	46.53
TraesCS6D01G085200.1	Wheat	plastid	41.63	44.06
TraesCS2D01G500100.2	Wheat	mitochondrion	23.66	39.39
TraesCS6D01G149100.1	Wheat	cytosol	13.67	27.22
TraesCS7D01G375200.1	Wheat	cytosol	12.9	25.85
TraesCS5D01G174400.1	Wheat	cytosol	13.21	25.67

Protein Annotations

EnsemblPlants:TraesCS6D01G085300.6	EnsemblPlantsGene:TraesCS6D01G085300	Gene3D:1.10.8.20	Gene3D:3.40.525.10	InterPro:CRAL-TRIO_dom	InterPro:CRAL-TRIO_dom_sf
InterPro:CRAL/TRIO_N_dom	InterPro:CRAL/TRIO_N_dom_sf	InterPro:IPR001251	InterPro:IPR036865	ncoils:Coil	PANTHER:PTHR23324
PANTHER:PTHR23324:SF145	PFAM:PF00650	PFAM:PF03765	PFscan:PS50191	PRINTS:PR00180	SMART:SM00516
SMART:SM01100	SUPFAM:SSF46938	SUPFAM:SSF52087	TIGR:cd00170	MapMan:35.1	:

Description

No Description!

Coordinates

chr6D:-:50745740..50750110

Molecular Weight (calculated)

74333.5 Da

IEP (calculated)

8.857

GRAVY (calculated)

-0.458

Length

651 amino acids

Sequence
(BLAST)

001: MSGHLDRLAR PGFEGCSSHD DRRSYERRSD FEISEDEKKT RMGSLKKKAI DASSKLRHSL KKKNRRKSGS RVLSVSIEDV RDLGELEEVE AFRQALILDE
101: LLPTRHDDYH MLLRFLKARK FDIEKAKQMW TDMLQWRKEY GTDTIVEDFD YTELDTVLEY YPHGYHGVDK EGRPVYIERL GKVDPNKLMN VTTMDRYVRY
201: HVKEFERSFL IKFPACSLAA KRHINSSTTI LDVQGVGLKN FSKTARELIM RLQKVDNDNY PETLHQMFIV NAGPGFRMLW STVKSFLDPK TTSKIHVLGN
301: KCQSKLLEII DASELPEFLG GTCTCPEYGG CLKAEKGPWK DANILKKVLN GEAQCARQIV TVSNGTETII SYPKSKYQTV RGSDTSTAES GSEAEDVTSP
401: KALRSYISHP KLTPVREEVK MIRATSFSTR MPEYDVPVVD KAVDATWKRE LPWKVPVPPK DSSLATTTKA SNRSLDQIIP ALMAFVIAIV TLLRSVKDVA
501: TKRLADKNES DEQSSAVYQD CIPKEEFRPP SPGPGFAESD LFSLVLQRLA ELEAKVHALE EKPSEMPCEK EELLNAAVRR VDALEAELIV TKKVIPWFAL
601: RFRKKIPWLA AHCVTRMKKP QHHFRTCCIF YYFIIEKVST CHLPCAFTKF I

Best Arabidopsis Sequence Match ( AT2G21520.1 )
(BLAST)

001: MSGPLDRFAR PCFEGFLSSD EKKERKSDFE NSEDERRTRI GSLKKKAINA STKFKHSLKK KSGRRKSDGR VSSVSIEDVR DVEELQAVDA FRQSLLMDEL
101: LPDRHDDYHM MLRFLKARKF DVEKAKQMWA DMIQWRKEFG TDTIIQDFDF EEINEVLKHY PQCYHGVDKE GRPIYIERLG KVDPNRLMQV TSMDRYVRYH
201: VKEFERSFMI KFPSCTISAK RHIDSSTTIL DVQGVGLKNF NKSARDLITR LQKIDGDNYP ETLHQMFIIN AGPGFRLLWN TVKSFLDPKT SAKIHVLGYK
301: YLSKLLEVID VNELPEFLGG ACTCADQGGC MLSDKGPWKN PEIVKMVLHG GAHRARQVVK VLNSEGKVIA YAKPSYTWIK GSDTSTAESG SDAEDIGSPK
401: AIKSFSHLRL TPVREEAKIA GETSLAGSFP GYDEYVPMVD KAVDATWKVK PAIQRVASRG ALMSPTVPKD HEGIKARVLV MFMAFLMAVF TFFRTVTKKL
501: PATTTSSPAE TQGNAIELGS NGEGVKEECR PPSPVPDLTE TDLLNCVTKK LTELEGKIGT LQSKPNEMPY EKEELLNAAV CRVDALEAEL IATKKALYEA
601: LMRQEELLAY IDRQEEAQFQ KMKKKKKKHL FCF

Arabidopsis Description

Sec14p-like phosphatidylinositol transfer family protein [Source:UniProtKB/TrEMBL;Acc:B3H588]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.