Factsheet for TraesCS5D01G174400.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G170000.1	Wheat	cytosol	99.7	99.7
TraesCS5B01G166800.1	Wheat	cytosol	99.4	99.4
HORVU5Hr1G052230.2	Barley	cytosol	96.42	96.13
Os09t0258000-01	Rice	cytosol	85.67	85.67
EER96447	Sorghum	cytosol	82.69	82.69
Zm00001d005118_P002	Maize	cytosol	78.51	66.75
CDY52903	Canola	cytosol	63.58	65.14
Bra038021.1-P	Field mustard	cytosol	63.28	64.83
TraesCS6D01G149100.1	Wheat	cytosol	63.28	64.83
CDY53762	Canola	cytosol	63.28	64.83
CDY42389	Canola	cytosol	62.69	64.62
Bra030831.1-P	Field mustard	cytosol	62.39	64.31
CDY10527	Canola	cytosol	62.39	64.31
TraesCS7D01G375200.1	Wheat	cytosol	61.49	63.38
AT1G55840.1	Thale cress	cytosol	61.49	63.38
TraesCS2D01G500100.2	Wheat	mitochondrion	20.6	17.65
TraesCS7D01G238000.2	Wheat	cytosol	25.97	14.38
TraesCS2D01G506400.1	Wheat	nucleus	26.27	13.9
TraesCS6D01G265200.1	Wheat	cytosol	25.37	13.73
TraesCS2D01G335700.2	Wheat	nucleus	23.58	13.37
TraesCS3D01G255900.4	Wheat	cytosol	24.48	13.33
TraesCS6D01G085300.6	Wheat	cytosol, nucleus, plastid	25.67	13.21
TraesCS6D01G085200.1	Wheat	plastid	22.69	12.36
TraesCS1D01G372200.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole	25.07	11.76

Protein Annotations

Gene3D:3.40.525.10	MapMan:35.1	InterPro:CRAL-TRIO_dom	InterPro:CRAL-TRIO_dom_sf	InterPro:CRAL/TRIO_N_dom	InterPro:CRAL/TRIO_N_dom_sf
InterPro:IPR001251	InterPro:IPR036865	PFAM:PF00650	PFAM:PF03765	PRINTS:PR00180	PFscan:PS50191
PANTHER:PTHR23324	PANTHER:PTHR23324:SF142	SMART:SM00516	SMART:SM01100	SUPFAM:SSF46938	SUPFAM:SSF52087
EnsemblPlantsGene:TraesCS5D01G174400	EnsemblPlants:TraesCS5D01G174400.1	TIGR:cd00170	SEG:seg	:	:

Description

No Description!

Coordinates

chr5D:-:273115420..273120709

Molecular Weight (calculated)

37942.7 Da

IEP (calculated)

8.175

GRAVY (calculated)

-0.392

Length

335 amino acids

Sequence
(BLAST)

001: MAAASEEAIK QFSVLMEQLE EPLKTTFQNV HQGYPRGTLL RFLKAREWNV PKAYKMLMDC LNWRLQNEID SVLAKPILPA DLYRSIRDTL LVGLTGYSKQ
101: GQPVYAFGVG LSTFDRASVN YYLQSHIQMN EYRDRVVLPG ASEMSGKQIN TCLKVMDMTG LKLSALNQIK MLSTITAVDD LNYPEKTETY YIVNAPYVFS
201: ACWKVVKPLL QERTKKKIKV LYGPGRDELL KVMDYASLPH FCKREGSGSG SSSDEVDCYS YDHPFHQELY NYVKQQALRN QDSVGPAKQG SMHVRVPTPD
301: LEEAKIMETI QSELHNLKGG DGISRSFSRI TIEGP

Best Arabidopsis Sequence Match ( AT5G47730.1 )
(BLAST)

001: MGIVSEEAID EFQELMDQVE EPLKKTYERV HQGYLRENLG RFLKARDWNV CKAHTMLVEC LRWRVDNEID SILSKPIVPT ELYRDVRDSQ LIGMSGYTKE
101: GLPVFAIGVG LSTFDKASVH YYVQSHIQIN EYRDRVLLPS ISKKNGRPIT TCVKVLDMTG LKLSALSQIK LVTIISTIDD LNYPEKTNTY YVVNAPYIFS
201: ACWKVVKPLL QERTRKKVHV LSGCGRDELL KIMDFTSLPH FCRSGSSGSS HHTQSANCFS INHPFHQQLY NYVKHHYETQ GQAEPAKQGS FHVGFPEPEA
301: ERCVIAKTIE SELHKFENRN GLAVSIDDRK SSHETLANGD L

Arabidopsis Description

At5g47730 [Source:UniProtKB/TrEMBL;Acc:Q9FIK6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.